TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000085_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Caenorhabditis elegans # Complete (500 letters) Database: genome.fa 1696 sequences; 31,706,682 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value mex409j13.q1k 139 5e-33 mex386e10.q1k 101 1e-21 mex378p04.q1k 61 2e-09 mex109a12.p1k 57 2e-08 mex484k20.q1k 55 9e-08 mex99f20.p1k 55 1e-07 mex303a15.p1k 55 1e-07 mex425i21.q1k 55 1e-07 mex320d04.p1k 55 1e-07 mex123f07.p1k 55 1e-07 mex54a16.p1k 55 1e-07 mex259m22.p1k 55 2e-07 mex22g23.p1k 48 1e-05 mex239b05.q1k 48 1e-05 mex309d24.q1k 48 1e-05 mex339n17.q1k 48 1e-05 mex384f04.p1k 48 1e-05 mex315k04.p1k 48 2e-05 1036_mexFOS1_32m13.q1kpIBR 48 2e-05 mex469p04.p1k 47 3e-05 mex139k18.p1k 45 1e-04 mex488e14.p1k 45 2e-04 1036_mexFOS1_35k08.p1kpIBF 42 8e-04 1036_mexFOS1_17f03.q1kpIBR 41 0.002 mex435o22.q1k 41 0.002 mex459k21.q1k 40 0.003 mex556b19.q1k 38 0.020 1036_mexFOS1_26m09.q1kpIBR 30 3.2 mex107k03.q1k 30 5.4 1036_mexFOS1_24p08.p1kpIBF 29 9.3 mex233f23.q1k 29 9.3 mex255n05.p1k 29 9.3 >mex409j13.q1k Length = 36118 Score = 139 bits (350), Expect = 5e-33 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 40/356 (11%) Frame = +3 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTM------- 66 +N+G+LGHVDSGKT L + ++ ST+AFD S + R TLDLGFS Sbjct: 14619 VNIGLLGHVDSGKTALAKALSSTASTAAFDKSPQSQS----RGITLDLGFSACEVSVEDG 14786 Query: 67 ----------TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEH 116 L+ + L+DCPGH+ LIR V+ + + D +++ID G+Q QTAE Sbjct: 14787 NEDATQVLRSADLTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQVQTAEC 14966 Query: 117 LLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD------ENSPIVEMSL 170 L+L + +++VLNK D + + + +PIVE++ Sbjct: 14967 LVL-GEVLAKPLVVVLNKTDAIQGATPAAKEAALAALKRKLQQAFRRTRWPTAPIVEVAA 15143 Query: 171 ADGYF---------KEEMLQNLKLAIESRIFEPKRDEEGE----FLIAIDHCFAIKGQGT 217 A E +L + A++ + ++ E E F + +DHCFA++GQGT Sbjct: 15144 APREMAGGIGHPVNTEAVLPLVLRAVDLAALKAAKESEAERPAQFYMLVDHCFAVRGQGT 15323 Query: 218 VLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKXXXXXXXXXXXXXFLVAPSFDEHRF 277 V TGTV+ GV+R+ + P L R+VK L+ + V FD Sbjct: 15324 VFTGTVVAGVVRVGDTVLVPELQTTRKVKGLQVFHKPVESAQSGDRVGLCVT-QFDPTWM 15500 Query: 278 SR---CICGPLG-TLKSTKFVLATVEPIQFFRKSINSKSKIHVAVAFETVMAECQF 329 R C G TL S+ ++A V +++ ++ +K H+ + TVM ++ Sbjct: 15501 ERGVLCSAASSGRTLVSSSQLIARVHRVRYHPLPCDTHTKFHITIGHATVMGAMRY 15668 >mex386e10.q1k Length = 60303 Score = 101 bits (252), Expect = 1e-21 Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 12/242 (4%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLTRRI----AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSL 69 L +G +GHVD GKTTLT I A+ G A D A + + R Sbjct: 16372 LIIGTIGHVDHGKTTLTSAITTVLAKRGQAQALDYFAIDKSPEEKSRKITINATHVEYES 16551 Query: 70 SGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVI 129 R IDCPGH ++ ++ + D I+++ G+ PQT EHLL+ S+ ++ Sbjct: 16552 EKRHYGHIDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICSQIGLPALV 16731 Query: 130 IVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD-ENSPIVEMSL-----ADGYFKEEMLQNL 183 +NK D+ VR+ L+ E +PIV S D ++E +L+ L Sbjct: 16732 GFINKVDMTDEDTCDLVDMEVREQLEKYKFPAEETPIVRGSALKAVEGDAKYEENILE-L 16908 Query: 184 KLAIESRIFEPKRDEEGEFLIAIDHCFAI--KGQGTVLTGTVIRGVLRLNTEIEFPALNE 241 + I +P R+ + FL+AI+H + I + ++TG V +GVL+LNT+ E + Sbjct: 16909 VRKCDEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVIVTGRVDQGVLKLNTDAELAGFSV 17088 Query: 242 KR 243 K+ Sbjct: 17089 KK 17094 >mex378p04.q1k Length = 37120 Score = 60.8 bits (146), Expect = 2e-09 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 8/127 (6%) Frame = +1 Query: 18 ILGHVDSGKTTLTRRI-------AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLS 70 +LGHVD+GKT+L RI E G + AT + + T +L +L+ Sbjct: 11008 VLGHVDTGKTSLLDRIRSTNVQGGEAGGITQ-QIGATFFPRESLVSATEELAKKYKCNLN 11184 Query: 71 GRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHL-LLASKFCPNRVI 129 L +ID PGH S++ D+AI+++D++ G++ QT E + LL K CP I Sbjct: 11185 VPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESIRLLREKRCP--FI 11358 Query: 130 IVLNKCD 136 + LNK D Sbjct: 11359 VALNKVD 11379 >mex109a12.p1k Length = 38775 Score = 57.4 bits (137), Expect = 2e-08 Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 17/235 (7%) Frame = +1 Query: 13 PLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGR 72 P + I+GHVD GKTTL + + + GI +N +G + + G Sbjct: 1750 PPIVSIMGHVDHGKTTLLDHLRH--------TNVVAGEAGGITQN---VGAFQVKTPDGH 1896 Query: 73 RLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVL 132 + ID PGH+ +T D+ ++I+ V G+QPQT E + LA + +++ + Sbjct: 1897 IITFIDTPGHAAFTAMREVGATTNDLIVLIVSAVDGVQPQTREVIELAQR-KGTPMVVAV 2073 Query: 133 NKCDLXXXXXXXXXXXXVRKGLKSMGV--DENS---PIVEMSLADGYFKEEMLQNLKLAI 187 K D V++ L + GV +EN +V++ DG E+L+ L L Sbjct: 2074 TKID------RQPDCDYVKEQLAANGVELEENGGDVQLVKICAKDGRGIPELLEALHLQA 2235 Query: 188 ESRIFEPKRDEEGEFLI------------AIDHCFAIKGQGTVLTGTVIRGVLRL 230 E E + A+ C +K +TGTV V R+ Sbjct: 2236 ELCEVATPTPARAELYVLESRNLGVSEVAAVVRCGTVKPGQVFVTGTVYGTVKRI 2400 >mex484k20.q1k Length = 49043 Score = 55.5 bits (132), Expect = 9e-08 Identities = 63/275 (22%), Positives = 107/275 (38%), Gaps = 45/275 (16%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTM------- 66 +N+G +GHV GK+T+ + ++ + T F A + T+ LG++ Sbjct: 3769 INVGTIGHVAHGKSTVVKALSGV-KTQKFHREA-------VMNITIHLGYANAKVYQCET 3924 Query: 67 -------------------------TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIV 101 T R + +DCPGH L+ +L + + D A++ Sbjct: 3925 CPRPTCYQTYPSSQPDSTPCPNCGETMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALL 4104 Query: 102 IIDVVAGI-QPQTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD 160 +I QPQT EHL ++++ NK DL VR L ++ + Sbjct: 4105 LIAANESFPQPQTLEHLKAVEIMKLRHLVVLQNKIDLVGEVKAHDQYRHVRAYLDNIAL- 4281 Query: 161 ENSPIVEMSLADGYFKEEMLQNLKLAIE--SRIFEPKRDEEGEFLIAIDHCFAIKG---- 214 N PIV +S ++ +N+ +E I P R + + + F I Sbjct: 4282 -NVPIVPIS-------AQLKRNVDYLLEYLLHIPMPVRQLKAPVRMTVVRSFDINKPGEG 4437 Query: 215 -----QGTVLTGTVIRGVLRLNTEIEF-PALNEKR 243 +G V GTV +GV+++ +E P L R Sbjct: 4438 DIESLKGGVAGGTVTQGVIKVGQVVEIRPGLVRSR 4542 Score = 53.9 bits (128), Expect = 3e-07 Identities = 64/278 (23%), Positives = 107/278 (38%), Gaps = 47/278 (16%) Frame = +2 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTM------- 66 +N+G +GHV GK+T+ + ++ + T F A + T+ LG++ Sbjct: 902 INVGTIGHVAHGKSTVVKALSGV-KTQKFHREA-------VMNITIHLGYANAKVYQCET 1057 Query: 67 -------------------------TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIV 101 T R + +DCPGH L+ +L + + D A++ Sbjct: 1058 CPRPTCYQTYPSSQPDSTPCPNCGETMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALL 1237 Query: 102 IIDVVAGI-QPQTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD 160 +I QPQT EHL A + +I++ NK DL + L + Sbjct: 1238 LIAANESFPQPQTLEHLAAAEMIGVSSLIVLQNKVDLVSKERAAAQYSIIHHYLATKTAY 1417 Query: 161 ENSPIVEMSLADGYFKEEMLQNLKLAIESRIFEPKRD-EEGEFLIAI------------D 207 +P++ + ++ M + L I P+R +++ + D Sbjct: 1418 AKAPVIPVCA-----QQHMNISFLLDYLVHIPLPRRQLHHAQYMNVLRSFDVSLPGPAGD 1582 Query: 208 HCFAIKGQGTVLTGTVIRGVLRLNTEIE-FPALNEKRR 244 A+K G V+ GTV GVL + EIE P L RR Sbjct: 1583 DAKALK--GGVVGGTVAAGVLCVGDEIEIIPGLLVLRR 1690 >mex99f20.p1k Length = 2336 Score = 55.1 bits (131), Expect = 1e-07 Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = -2 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 1213 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 1034 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 1033 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 857 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSP 164 I QT EH LLA ++++ NK D + K + + V N Sbjct: 856 ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVMYAQSRYDEISKEVSAYLKRVGYNPE 677 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M+ L + P R + + + + I G Sbjct: 676 KVRFIPISGWQGDNMIDKSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRLPLQDVYKIGG 497 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F N VK++E Sbjct: 496 IGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIE 392 >mex303a15.p1k Length = 24893 Score = 55.1 bits (131), Expect = 1e-07 Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 23639 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 23460 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 23459 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 23283 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSP 164 I QT EH LLA ++++ NK D + K + + V N Sbjct: 23282 ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVMYAQSRYDEISKEVSAYLKRVGYNPE 23103 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M+ L + P R + + + + I G Sbjct: 23102 KVRFIPISGWQGDNMIDKSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRLPLQDVYKIGG 22923 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F N VK++E Sbjct: 22922 IGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIE 22818 >mex425i21.q1k Length = 2831 Score = 55.1 bits (131), Expect = 1e-07 Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 685 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 864 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 865 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 1041 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSP 164 I QT EH LLA ++++ NK D + K + + V N Sbjct: 1042ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVMYAQSRYDEISKEVSAYLKRVGYNPE 1221 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M+ L + P R + + + + I G Sbjct: 1222KVRFIPISGWQGDNMIDKSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRLPLQDVYKIGG 1401 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F N VK++E Sbjct: 1402IGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIE 1506 >mex320d04.p1k Length = 1129 Score = 55.1 bits (131), Expect = 1e-07 Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = +3 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 216 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 395 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 396 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 572 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSP 164 I QT EH LLA ++++ NK D + K + + V N Sbjct: 573 ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVMYAQSRYDEISKEVSAYLKRVGYNPE 752 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M+ L + P R + + + + I G Sbjct: 753 KVRFIPISGWQGDNMIDKSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRLPLQDVYKIGG 932 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F N VK++E Sbjct: 933 IGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIE 1037 >mex123f07.p1k Length = 2568 Score = 55.1 bits (131), Expect = 1e-07 Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = -3 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 2254 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 2075 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 2074 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 1898 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSP 164 I QT EH LLA ++++ NK D + K + + V N Sbjct: 1897 ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVMYAQSRYDEISKEVSAYLKRVGYNPE 1718 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M+ L + P R + + + + I G Sbjct: 1717 KVRFIPISGWQGDNMIDKSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRLPLQDVYKIGG 1538 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F N VK++E Sbjct: 1537 IGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIE 1433 >mex54a16.p1k Length = 1364 Score = 55.1 bits (131), Expect = 1e-07 Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = -2 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 1114 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 935 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 934 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 758 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSP 164 I QT EH LLA ++++ NK D + K + + V N Sbjct: 757 ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVMYAQSRYDEISKEVSAYLKRVGYNPE 578 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M+ L + P R + + + + I G Sbjct: 577 KVRFIPISGWQGDNMIDKSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRLPLQDVYKIGG 398 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F N VK++E Sbjct: 397 IGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIE 293 >mex259m22.p1k Length = 45004 Score = 54.7 bits (130), Expect = 2e-07 Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 6/128 (4%) Frame = +2 Query: 15 NLGILGHVDSGKTTLTRRIA-ELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRR 73 N+GI H+D+GKTT T R+ G T + TTT + D G + ++ R Sbjct: 31676 NIGIAAHIDAGKTTTTERMLFYAGVTKRVGDVDSGTTTTDFMKEEADRGITIQSAAVSLR 31855 Query: 74 -----LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRV 128 + LID PGH V V D + + D AG+Q Q+ L + KF + Sbjct: 31856 WRDHGINLIDTPGHVDFTVEVERTMRVVDGVVALFDASAGVQAQSYTVLQQSRKF-NAPL 32032 Query: 129 IIVLNKCD 136 I LNK D Sbjct: 32033 IAFLNKMD 32056 >mex22g23.p1k Length = 1884 Score = 48.1 bits (113), Expect = 1e-05 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 27/150 (18%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 1027 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 1206 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 1207 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 1383 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 I QT EH LLA ++++ NK D Sbjct: 1384 ISKDGQTREHALLAFTLGVKQMVVCCNKMD 1473 >mex239b05.q1k Length = 1725 Score = 48.1 bits (113), Expect = 1e-05 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 27/150 (18%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 1069 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 1248 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 1249 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 1425 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 I QT EH LLA ++++ NK D Sbjct: 1426 ISKDGQTREHALLAFTLGVKQMVVCCNKMD 1515 >mex309d24.q1k Length = 2140 Score = 48.1 bits (113), Expect = 1e-05 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 27/150 (18%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 604 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 425 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 424 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 248 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 I QT EH LLA ++++ NK D Sbjct: 247 ISKDGQTREHALLAFTLGVKQMVVCCNKMD 158 >mex339n17.q1k Length = 1171 Score = 48.1 bits (113), Expect = 1e-05 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 27/150 (18%) Frame = -3 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 668 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 489 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 488 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 312 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 I QT EH LLA ++++ NK D Sbjct: 311 ISKDGQTREHALLAFTLGVKQMVVCCNKMD 222 >mex384f04.p1k Length = 1968 Score = 48.1 bits (113), Expect = 1e-05 Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 27/150 (18%) Frame = -3 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 661 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 482 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 481 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 305 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 I QT EH LLA ++++ NK D Sbjct: 304 ISKDGQTREHALLAFTLGVKQMVVCCNKMD 215 >mex315k04.p1k Length = 197933 Score = 47.8 bits (112), Expect = 2e-05 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 9/108 (8%) Frame = +1 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDL---------GFST 65 N+GI H+DSGKTTL+ R+ T G ++++L +T Sbjct: 142939 NIGISAHIDSGKTTLSERVLFYSGRIGKIHEVKGGTEVGATMDSMELEKERGITIRSAAT 143118 Query: 66 MTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT 113 + +ID PGH V A V D AI+++ V G+Q QT Sbjct: 143119 QCRWKNSTINIIDTPGHVDFTIEVERALRVLDGAILLMCAVGGVQSQT 143262 Score = 45.1 bits (105), Expect = 1e-04 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 18/140 (12%) Frame = -2 Query: 15 NLGILGHVDSGKTTLTR---------RIAELGSTSAFDAHATSTTTD-GIRRNTLDLGFS 64 N+ ++ HVD GK+TL+ ++ E G D A I+ + + + Sbjct: 43084 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEEAGDKRIMDTRADEIARGITIKSTAISMHYH 42905 Query: 65 TMTSLSGRR--------LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEH 116 + G + LID PGH V AA V D A+V++D V G+ QT E Sbjct: 42904 VPKEMIGDLDDDKRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQT-ET 42728 Query: 117 LLLASKFCPNRVIIVLNKCD 136 +L + R ++ +NK D Sbjct: 42727 VLRQALTERIRPVVFINKVD 42668 >1036_mexFOS1_32m13.q1kpIBR Length = 53305 Score = 47.8 bits (112), Expect = 2e-05 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Frame = -2 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIR-RNTLDLGFSTMTSLSG-- 71 N+ ++ HVD GKTTL + T A + + D R R L +T L Sbjct: 41700 NIAVIAHVDHGKTTLVDSMLSQSGTVANAHNRVMDSKDQERERGITILAKNTAILLDDGK 41521 Query: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIV 131 RR+ ++D PGH V A + + I+++D G++P T ++L + R I+ Sbjct: 41520 RRINIVDTPGHLDFSGEVERALQMVEGIILLVDAKEGVRPGT-RYVLRKALSLHLRPIVC 41344 Query: 132 LNKCD 136 LNK D Sbjct: 41343 LNKID 41329 >mex469p04.p1k Length = 59646 Score = 47.0 bits (110), Expect = 3e-05 Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 30/152 (19%) Frame = -1 Query: 15 NLGILGHVDSGKTTLT------------------RRIAELGSTSAFD-AHATSTTTD--- 52 N+ GHVD+GK+T++ RR AE+ ++ A+ + + Sbjct: 22836 NIVFCGHVDAGKSTISGHLLMEKGLVDQREMEKLRREAEINHREGWEYAYVMDVSEEERS 22657 Query: 53 -GIRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVV 106 GI R T F T RR+ ++D PGH + +++ +T D+ +++I + Sbjct: 22656 KGITRETGAAYFET----EKRRVTVLDAPGHKAFVPSMIGGATQADICVLVISSRTGEFE 22489 Query: 107 AGIQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 G + QT EH +L ++I V+NK D Sbjct: 22488 TGFEKGGQTREHAMLVRTCGVKQMICVINKMD 22393 >mex139k18.p1k Length = 17803 Score = 45.4 bits (106), Expect = 1e-04 Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 25/224 (11%) Frame = +2 Query: 36 LGSTSAFDAHATSTTTDGIRRNTL-DLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAAST 94 L +++A + AT + G +T+ + + S + + L D GH ++ + T Sbjct: 8486 LMASAATASGATHSPAGGSGAHTMRQCTTKELAARSSKVVTLYDLAGHERYLKTTVLGMT 8665 Query: 95 --VFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRK 152 + D A ++I GIQ T EHL L IV+ + D + + Sbjct: 8666 RNMPDYACIVISANNGIQRMTKEHLALCLAL-KLPFFIVVTRIDATPSNIHDETLSNIHR 8842 Query: 153 GL----------------------KSMGVDENSPIVEMSLADGYFKEEMLQNLKLAIESR 190 L K++ D +PI E+S G ++LQ L L + Sbjct: 8843 LLKIPTVRKLPYPVRRHDEVTLAAKNLRHDRITPIFEVSNVTGVGIPDVLQFLNLLPTRK 9022 Query: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEI 234 + R E + ID F + G GTV+ G + +GV R+N + Sbjct: 9023 DWRQARSMPKEMI--IDSTFFVTGVGTVVGGIITQGVFRVNETV 9148 >mex488e14.p1k Length = 70354 Score = 44.7 bits (104), Expect = 2e-04 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Frame = +1 Query: 18 ILGHVDSGK-TTLTRRIAELGSTSAFDAHATSTTT-------------------DGIRRN 57 I GHVD+GK TTL + LG S D + R Sbjct: 55921 IAGHVDAGKSTTLGHLLLLLGRVSIQDVERNEKADRTHHKDSFKYAWLLDQCEEERRRGV 56100 Query: 58 TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQPQ 112 T+D G S RR+ ++D PGH + +++++T D A++++ + G+ Sbjct: 56101 TIDSG-SFCFETEHRRVHILDAPGHKDFVLNMISSATQADAALLVVTAATSEFETGLHHG 56277 Query: 113 TAEHLLLASKFCPNRVIIVLNKCD 136 T HLL+ +++ +NK D Sbjct: 56278 TKSHLLVLKTLGVGSIVVAVNKMD 56349 >1036_mexFOS1_35k08.p1kpIBF Length = 103920 Score = 42.4 bits (98), Expect = 8e-04 Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Frame = -2 Query: 15 NLGILGHVDSGKTTLTRRIAE----LGSTSAFDAHATSTTTDG----IRRNTLDLGFSTM 66 N ++ HVD GKTTL+ + L A + + D I + Sbjct: 87986 NFCMVAHVDHGKTTLSDYLVASNGILSPQLAGEVRLLDSRPDEQERCITMKASSIALHHA 87807 Query: 67 TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPN 126 + L L+D PGH V A + D A+VI+DVV G+ QTA +L + Sbjct: 87806 YAGKSHVLNLVDSPGHIDFSCEVSTAMRLCDGAVVIVDVVDGVTQQTAS-ILRHTYQEGL 87630 Query: 127 RVIIVLNKCDL 137 + +VLNK DL Sbjct: 87629 SMCLVLNKIDL 87597 >1036_mexFOS1_17f03.q1kpIBR Length = 68382 Score = 41.2 bits (95), Expect = 0.002 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Frame = -1 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTD---GIRRNTLDLGFSTMTSLSG 71 N+ ++ HVD GKTTL+ + + D AT T TD G + + + T + L Sbjct: 50655 NVSVVAHVDHGKTTLSDAMLRFSNLLPADG-ATGTFTDRLKGEKERGIPIKAQTCSMLLT 50479 Query: 72 RR-------LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFC 124 R + LID PGH V + + A +++DV G++ QT A + Sbjct: 50478 VRETGTQYLVNLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALE-- 50305 Query: 125 PNRVII-VLNKCD 136 N I+ VL K D Sbjct: 50304 QNLTILPVLTKMD 50266 >mex435o22.q1k Length = 32145 Score = 41.2 bits (95), Expect = 0.002 Identities = 35/120 (29%), Positives = 48/120 (40%) Frame = +3 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLALI 77 ++GHV+ GKT L + S A T IR T+ I Sbjct: 28527 VMGHVNHGKTALLDAL----QGSRIGAVEPHHITQSIRAFTIQ-----RPGGDNDLFTFI 28679 Query: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKCDL 137 D PGH + + D+ ++I V GI QT E + +A VI+VLNK DL Sbjct: 28680 DTPGHHIFVETRFHVQLIADVIALVISVAEGIGSQTHETIKVALN-VDKPVIVVLNKLDL 28856 >mex459k21.q1k Length = 1794 Score = 40.4 bits (93), Expect = 0.003 Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 18/113 (15%) Frame = -3 Query: 15 NLGILGHVDSGKTTLTR---------RIAELGSTSAFDAHATSTTTD-GIRRNTLDLGFS 64 N+ ++ HVD GK+TL+ ++ E G D A I+ + + + Sbjct: 346 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEEAGDKRIMDTRADEIARGITIKSTAISMHYH 167 Query: 65 TMTSLSGRR--------LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGI 109 + G + LID PGH V AA V D A+V++D V G+ Sbjct: 166 VPKEMIGDLDDDKRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGV 8 >mex556b19.q1k Length = 15909 Score = 37.7 bits (86), Expect = 0.020 Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 20/115 (17%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 15526 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 15705 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID G Sbjct: 15706 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHG 15867 >1036_mexFOS1_26m09.q1kpIBR Length = 5493 Score = 30.4 bits (67), Expect = 3.2 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%) Frame = -3 Query: 13 PLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATS--TTTDGIRRNTLDLGFSTMTSLS 70 PLN G+ GH D+GK T + + + A + T DG RN G+ + Sbjct: 3787 PLNKGVDGHKDAGKRTHAHAVRHSSPSRGWHASTRNRKQTRDGEERNARSSGWLQRAARR 3608 Query: 71 GRRLALID 78 R + + D Sbjct: 3607 KRHMHMPD 3584 >mex107k03.q1k Length = 16814 Score = 29.6 bits (65), Expect = 5.4 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 469 EKIDGILTEKEEISLFLKKYHNENR 493 E++DG+L+E EE+ L +++H R Sbjct: 7097 ERLDGVLSEVEEVQLLQQRHHRRRR 7171 >1036_mexFOS1_24p08.p1kpIBF Length = 68494 Score = 28.9 bits (63), Expect = 9.3 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Frame = -3 Query: 12 GPLNLGILGHVDSGKTTLTRR-IAELGSTSAFDAHATSTTTDGIRRNTLDLG-----FST 65 GP L H S KT L+RR +AE ST + A + T G+RR LG Sbjct: 17948 GPARAASLSH-RSRKTRLSRREMAERQSTWSATALSPRWTLAGVRRRATTLGACEVFLHA 17772 Query: 66 MTSLSGRRLAL 76 TSL+ RR +L Sbjct: 17771 STSLALRRSSL 17739 >mex233f23.q1k Length = 48955 Score = 28.9 bits (63), Expect = 9.3 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 16 LGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNT 58 LG+ + D+G + ++ GS ++ ATSTT D I R T Sbjct: 7443 LGLYSNRDAGAASTLAGVSP*GSRKSYPGTATSTTPDDI*RRT 7315 >mex255n05.p1k Length = 1001 Score = 28.9 bits (63), Expect = 9.3 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 20/101 (19%) Frame = -2 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHA-TSTTTDG 53 +NL ++GHVD+GK+T T + AE+G S A + Sbjct: 304 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 125 Query: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAAST 94 R T+D+ S +ID PGH I+ ++ ++ Sbjct: 124 ERGITIDIALWKFESPKS-VFTIIDAPGHRDFIKNMITGTS 5 Database: genome.fa Posted date: Jan 16, 2009 12:51 PM Number of letters in database: 31,706,682 Number of sequences in database: 1696 Lambda K H 0.322 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,729,728 Number of Sequences: 1696 Number of extensions: 269628 Number of successful extensions: 1326 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 1105 Number of HSP's gapped (non-prelim): 372 length of query: 500 length of database: 10,568,894 effective HSP length: 104 effective length of query: 396 effective length of database: 10,392,510 effective search space: 4115433960 effective search space used: 4115433960 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)