TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: genome.fa 
           32,746 sequences; 89,612,356 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAHK01002924.1| Trypanosoma cruzi strain CL Brener tcruzi_104...   238   1e-62
gb|AAHK01000776.1| Trypanosoma cruzi strain CL Brener tcruzi_104...   236   5e-62
gb|AAHK01000886.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    31   4.1  
gb|AAHK01000225.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    30   7.0  

>gb|AAHK01002924.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053504079, whole genome
            shotgun sequence
          Length = 4296

 Score =  238 bits (608), Expect = 1e-62
 Identities = 135/323 (41%), Positives = 191/323 (59%), Gaps = 5/323 (1%)
 Frame = -2

Query: 2    FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61
            F P   GL P+F LT +T   G SCK+PQ  L   LR         D      GMDC+V+
Sbjct: 2411 FNPTDVGLPPEFVLTDYTRLKGCSCKLPQPKLLALLRAVSTTPGQKD-----VGMDCSVV 2247

Query: 62   PLKRHKDY----LLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVST 117
             L +  ++     ++ T DFF+P V DP L G+IA  NVLSD+Y++G+ + DTV M+++ 
Sbjct: 2246 QLLQKDEHGAPLFMVSTTDFFFPSVEDPYLQGQIAATNVLSDLYSMGIDRCDTVLMMLAA 2067

Query: 118  STSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSEEI 177
            ST   E ER+V    +MKGF + ++  G   T     Q  +NPW +IGG+ATSV    E+
Sbjct: 2066 STEMDEMEREVSTREIMKGFVDQVRLAGSDVTG---GQTVMNPWPLIGGVATSVVTEPEM 1896

Query: 178  ILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLS-ECSDADIKETFEIAVKS 236
            + P+    GDVLVLTKPLG Q+A++   W    +  Y + +  + +  +++E +  A  S
Sbjct: 1895 VRPTGLCIGDVLVLTKPLGNQIAVNLKQWVRRPSPIYLETIQGKMTTEEVEELYNAATDS 1716

Query: 237  MTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINKLPIIKNVLKFS 296
            M  LN+NAA LM ++ AH ATD+TGFG+LGHA+NLA  Q+++V   +  LPI K  LK S
Sbjct: 1715 MKRLNRNAARLMRRHGAHGATDVTGFGILGHAHNLAVAQEKEVCLLLEALPIYKGALKAS 1536

Query: 297  TLVGQSTKFRSGRSVETSGGLLI 319
            TL+    +   G S ETSGGLL+
Sbjct: 1535 TLMSDKYQLLKGYSAETSGGLLV 1467


>gb|AAHK01000776.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508717, whole genome
             shotgun sequence
          Length = 24108

 Score =  236 bits (602), Expect = 5e-62
 Identities = 145/376 (38%), Positives = 211/376 (56%), Gaps = 9/376 (2%)
 Frame = -1

Query: 2     FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61
             F P   GL P+F LT +T   G SCK+PQ  L   LR         D      GMDC+V+
Sbjct: 13137 FNPTDVGLPPEFVLTDYTRLKGCSCKLPQPKLLALLRAVSTTPGQKD-----VGMDCSVV 12973

Query: 62    PL----KRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVST 117
              L    +R     ++ T DFF+P V DP L G+IA +NVLSD+Y++G+ + DTV M+++ 
Sbjct: 12972 QLLQKNERGAPLFMVSTTDFFFPSVEDPYLQGQIAASNVLSDLYSMGIDRCDTVLMMLAA 12793

Query: 118   STSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSEEI 177
             ST   E ER++    +MKGF + ++  G   T     Q  +NPW +IGG+ATSV    E+
Sbjct: 12792 STEMDEVEREISTREIMKGFVDQVRLAGSDVTG---GQTVMNPWPLIGGVATSVVTELEM 12622

Query: 178   ILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLS-ECSDADIKETFEIAVKS 236
             + P+    GDVLVLTKPLG Q+A++   W    +  Y + +  + +  +++E +  A  S
Sbjct: 12621 VRPTGLCIGDVLVLTKPLGNQVAVNLKQWVRRPSPIYLETIQGKMTTEEVEELYNAATDS 12442

Query: 237   MTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINKLPIIKNVLKFS 296
             M  LN+NAA LM ++ AH ATD+TGFG+LGHA+NLA  Q+++V   +  LPI K  LK S
Sbjct: 12441 MKRLNRNAARLMRRHGAHGATDVTGFGILGHAHNLAVAQEKEVCLLLEALPIYKGALKAS 12262

Query: 297   TLVGQSTKFRSGRSVETSGGLLICL-PADAADKFCRDFEEATNGEQKSFQIGHVTA---A 352
              L+    +   G S ETSGGLL+       A+++ ++  E     + ++ +G V A    
Sbjct: 12261 KLMSDKYQLLKGYSAETSGGLLVAFGDLCTAERYIKEICEV--DREPAWVVGSVIAHCGD 12088

Query: 353   NESDAVLCEDVEFIEV 368
                 A L +  E IEV
Sbjct: 12087 GSPHAKLQDGYEIIEV 12040


>gb|AAHK01000886.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511237, whole genome
            shotgun sequence
          Length = 21253

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 124  KERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCR 173
            K RDV +G ++K   NSL   G+  T        + P  I+ G   ++CR
Sbjct: 8134 KSRDVCLGSIIKDRANSLPFKGFHRT--------LQPTLILSGTKMAICR 8009


>gb|AAHK01000225.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506739, whole genome
             shotgun sequence
          Length = 49774

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -1

Query: 218   LSECSDADIKETFEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGHA 268
             LS+C  + +     +AV S T+ ++  A+ +   Q  C T  + F +L H+
Sbjct: 40903 LSQCFSSPVSSESIVAVSSFTFSSEARAIPIASSQRRCTTAASSFNVLLHS 40751


  Database: genome.fa
    Posted date:  Jan 19, 2010  5:13 PM
  Number of letters in database: 89,612,356
  Number of sequences in database:  32,746
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,063,769
Number of Sequences: 32746
Number of extensions: 496852
Number of successful extensions: 1861
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of query: 370
length of database: 29,870,785
effective HSP length: 108
effective length of query: 262
effective length of database: 26,334,217
effective search space: 6899564854
effective search space used: 6899564854
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)