TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: genome.fa 
           5578 sequences; 78,051,097 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQY01000032.1| Phytophthora sojae strain P6497 Psojae_Cont32...   171   2e-65
gb|AAQY01001652.1| Phytophthora sojae strain P6497 Psojae_Cont16...    30   5.2  

>gb|AAQY01000032.1| Phytophthora sojae strain P6497 Psojae_Cont32, whole genome shotgun
              sequence
          Length = 143152

 Score =  171 bits (433), Expect(2) = 2e-65
 Identities = 106/274 (38%), Positives = 151/274 (55%), Gaps = 25/274 (9%)
 Frame = +3

Query: 2      FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61
              F P + GLE DF LT F+   G  CK+PQ  L  YL     + K N+      GMD +V+
Sbjct: 133176 FDPVELGLESDFVLTNFSALKGCGCKLPQAKLLGYLDNLANDLKPNET----PGMDSSVV 133343

Query: 62     PLKRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVSTSTSF 121
               +   +D  L+ T DFF+P V DP + G+IA ANVLSDVYA+GVT+ DT+ MI+      
Sbjct: 133344 KISHGQDLYLVSTTDFFFPSVEDPYVQGKIACANVLSDVYAMGVTEVDTMLMILGVCRDM 133523

Query: 122    SEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATS----------- 170
              SEK+RDVV   +++GF +  +      T +   Q  +NPW I+GG+A S           
Sbjct: 133524 SEKQRDVVTTQMIRGFNDLARR---AQTNVTGGQTVMNPWPIVGGVAMSVRSGRCSRSQ* 133694

Query: 171    -------------VCRSE-EIILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKK 216
                           VC +E +II P NA  GDV++LTKPLG Q+A++   W+  + E++ +
Sbjct: 133695 KSVASLQYSC*LAVC*AESQIIRPENAVVGDVIILTKPLGTQVAVNLFQWK-KKPERWHR 133871

Query: 217    LLSECSDADIKETFEIAVKSMTYLNKNAALLMHK 250
              +    +  D    F +A +SM+ LN NAA +MHK
Sbjct: 133872 VDKVVTPEDADVAFRMASESMSRLNLNAAKMMHK 133973



 Score = 98.6 bits (244), Expect(2) = 2e-65
 Identities = 52/123 (42%), Positives = 78/123 (63%)
 Frame = +2

Query: 247    LMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINKLPIIKNVLKFSTLVGQSTKFR 306
              L+ +Y AH ATD+TGFG+L HA N A+ Q   V F+++ LPIIKN++K +  +G S K  
Sbjct: 134033 LLVQYGAHSATDVTGFGILAHARNQAKSQLGDVSFELHTLPIIKNMVKVNETIGNSFKLL 134212

Query: 307    SGRSVETSGGLLICLPADAADKFCRDFEEATNGEQKSFQIGHVTAANESDAVLCEDVEFI 366
               G + ETSGGLL+CLPA+ AD F ++  E       ++ +G V A ++ DA +  +   +
Sbjct: 134213 DGFAAETSGGLLLCLPAENADAFIKELRELDG--MPAWVVGRVVAGSK-DAHIVPNPTIL 134383

Query: 367    EVS 369
              E+S
Sbjct: 134384 EIS 134392


>gb|AAQY01001652.1| Phytophthora sojae strain P6497 Psojae_Cont1652, whole genome shotgun
             sequence
          Length = 136653

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = -3

Query: 51    LIGSGMDCAVIPLKRHKDYLLIQ 73
             ++GSG  C  IP++RH+++LL+Q
Sbjct: 99376 MLGSGFFCL*IPIERHENHLLLQ 99308


  Database: genome.fa
    Posted date:  Jan 19, 2010  5:09 PM
  Number of letters in database: 78,051,097
  Number of sequences in database:  5578
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,105,061
Number of Sequences: 5578
Number of extensions: 389664
Number of successful extensions: 1544
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1151
Number of HSP's gapped (non-prelim): 648
length of query: 370
length of database: 26,017,032
effective HSP length: 108
effective length of query: 262
effective length of database: 25,414,608
effective search space: 6658627296
effective search space used: 6658627296
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)