TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Anopheles gambiae # Complete (369 letters) Database: genome.fa 32,746 sequences; 89,612,356 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAHK01002924.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 235 1e-61 gb|AAHK01000776.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 234 2e-61 gb|AAHK01002345.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 34 0.37 gb|AAHK01001366.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 30 5.3 gb|AAHK01011402.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 30 7.0 gb|AAHK01000977.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 30 7.0 >gb|AAHK01002924.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053504079, whole genome shotgun sequence Length = 4296 Score = 235 bits (599), Expect = 1e-61 Identities = 136/378 (35%), Positives = 201/378 (53%), Gaps = 11/378 (2%) Frame = -2 Query: 2 FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGI 61 F P GL +F LT ++ L+G K+PQ L LL V G KD + Sbjct: 2411 FNPTDVGLPPEFVLTDYTRLKGCSCKLPQPKLLALLRAV-STTPGQKD-----------V 2268 Query: 62 GLDSSVIALKHD------LFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQ 115 G+D SV+ L LF+V + DFF+P ++DP++ G+IA NV+SD++++G D Sbjct: 2267 GMDCSVVQLLQKDEHGAPLFMVSTTDFFFPSVEDPYLQGQIAATNVLSDLYSMGIDRCDT 2088 Query: 116 IKLIVTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCH 175 + +++ A TE E EREV +M+GF++ + + V G NPW +IGG A++V Sbjct: 2087 VLMMLAASTEMDEMEREVSTREIMKGFVDQVRLAGSDVTGGQTVMNPWPLIGGVATSVVT 1908 Query: 176 RSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRI 235 E++ P GD LVLTKPLG Q+A N W+ ++ + T ++E+ Y Sbjct: 1907 EPEMVRPTGLCIGDVLVLTKPLGNQIAVNLKQWVRRPSPIYLETIQGKMTTEEVEELYNA 1728 Query: 236 ALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNV 295 A +SM RLN+ A LM+++GAH ATDVTGFG+ GHA NLA Q +V L+ LPI K Sbjct: 1727 ATDSMKRLNRNAARLMRRHGAHGATDVTGFGILGHAHNLAVAQEKEVCLLLEALPIYKGA 1548 Query: 296 REIAETLGRGAKLLAGKAVETSGGLLICLPREAAA-GFCEEYRRCTKHEAWIVG----HV 350 + + + +LL G + ETSGGLL+ A + +E + AW+VG H Sbjct: 1547 LKASTLMSDKYQLLKGYSAETSGGLLVAFGDLCTAERYIKELCEVDREPAWVVGSVIAHC 1368 Query: 351 EKGARGVKMNPNLNILSV 368 G+ K+ I+ V Sbjct: 1367 GDGSPHAKLQDGYKIIEV 1314 >gb|AAHK01000776.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508717, whole genome shotgun sequence Length = 24108 Score = 234 bits (597), Expect = 2e-61 Identities = 135/378 (35%), Positives = 203/378 (53%), Gaps = 11/378 (2%) Frame = -1 Query: 2 FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGI 61 F P GL +F LT ++ L+G K+PQ L LL V G KD + Sbjct: 13137 FNPTDVGLPPEFVLTDYTRLKGCSCKLPQPKLLALLRAV-STTPGQKD-----------V 12994 Query: 62 GLDSSVIALKHD------LFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQ 115 G+D SV+ L LF+V + DFF+P ++DP++ G+IA +NV+SD++++G D Sbjct: 12993 GMDCSVVQLLQKNERGAPLFMVSTTDFFFPSVEDPYLQGQIAASNVLSDLYSMGIDRCDT 12814 Query: 116 IKLIVTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCH 175 + +++ A TE E ERE+ +M+GF++ + + V G NPW +IGG A++V Sbjct: 12813 VLMMLAASTEMDEVEREISTREIMKGFVDQVRLAGSDVTGGQTVMNPWPLIGGVATSVVT 12634 Query: 176 RSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRI 235 E++ P GD LVLTKPLG Q+A N W+ ++ + T ++E+ Y Sbjct: 12633 ELEMVRPTGLCIGDVLVLTKPLGNQVAVNLKQWVRRPSPIYLETIQGKMTTEEVEELYNA 12454 Query: 236 ALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNV 295 A +SM RLN+ A LM+++GAH ATDVTGFG+ GHA NLA Q +V L+ LPI K Sbjct: 12453 ATDSMKRLNRNAARLMRRHGAHGATDVTGFGILGHAHNLAVAQEKEVCLLLEALPIYKGA 12274 Query: 296 REIAETLGRGAKLLAGKAVETSGGLLICLPREAAA-GFCEEYRRCTKHEAWIVG----HV 350 + ++ + +LL G + ETSGGLL+ A + +E + AW+VG H Sbjct: 12273 LKASKLMSDKYQLLKGYSAETSGGLLVAFGDLCTAERYIKEICEVDREPAWVVGSVIAHC 12094 Query: 351 EKGARGVKMNPNLNILSV 368 G+ K+ I+ V Sbjct: 12093 GDGSPHAKLQDGYEIIEV 12040 >gb|AAHK01002345.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510649, whole genome shotgun sequence Length = 6269 Score = 34.3 bits (77), Expect = 0.37 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -3 Query: 21 LRGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEG 58 LR ++ P++VLN L GV+GE+L GK P E G Sbjct: 5568 LRSVLNERPKNVLNERLRGVHGERLRSVHGKRPKNEHG 5455 >gb|AAHK01001366.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508711, whole genome shotgun sequence Length = 13421 Score = 30.4 bits (67), Expect = 5.3 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = -2 Query: 149 CNAPVQIGSIAENPWCVIGGAASAVCH---RSELIMPYNAQPGDALV 192 C +++GS P+CV+GG+AS S L P +A PG + Sbjct: 160 CALQLKLGSSRPRPFCVLGGSASCFFRSPMSSRL*APSSAAPGSTRI 20 >gb|AAHK01011402.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053414441, whole genome shotgun sequence Length = 1077 Score = 30.0 bits (66), Expect = 7.0 Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 13/184 (7%) Frame = +2 Query: 139 MQGFLEAAKACNAPVQIGSIAEN-PWCVIGGAASAVCHRSELIMPYNAQPGDALVLTKPL 197 +QGFL ++ CN ++I + N P + R + P PG + P+ Sbjct: 437 IQGFLSGSRVCNELLRIKDVTWNRPHFIHASFDHPPVFRLLISSPIAIHPGAHRLHIHPV 616 Query: 198 GT------------QLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRIALESMSRLNK 245 G A++W ++ E F+ + + M L+ Sbjct: 617 GAIHNDSLGVCLRLPFTIVAHVWGCHHNHAHSSKTAESFSGG---VPFSVTS*IMYPLHL 787 Query: 246 TGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNVREIAETLGRG 305 ++++K + +T V+ L G +++ T D+HL+ L I+ V+++ E + G Sbjct: 788 QMPQIIQKVLGYFSTHVSCHRLDGLVKHIRRASTKTADYHLEFLDIV--VQQLVEKVRAG 961 Query: 306 AKLL 309 + L Sbjct: 962 SHRL 973 >gb|AAHK01000977.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511219, whole genome shotgun sequence Length = 19593 Score = 30.0 bits (66), Expect = 7.0 Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 13/184 (7%) Frame = -2 Query: 139 MQGFLEAAKACNAPVQIGSIAEN-PWCVIGGAASAVCHRSELIMPYNAQPGDALVLTKPL 197 +QGFL ++ CN ++I + N P + R + P PG + P+ Sbjct: 5117 IQGFLSGSRVCNELLRIKDVTWNRPHFIHASFDHPPVFRLLISSPIAIHPGAHRLHIHPV 4938 Query: 198 GT------------QLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRIALESMSRLNK 245 G A++W ++ E F+ + + M L+ Sbjct: 4937 GAIHNDSLGVCLRLPFTIVAHVWGCHHNHAHSSKTAESFSGG---VPFSVTS*IMYPLHL 4767 Query: 246 TGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNVREIAETLGRG 305 ++++K + +T V+ L G +++ T D+HL+ L I+ V+++ E + G Sbjct: 4766 QMPQIIQKVLGYFSTHVSCHRLDGLVKHIRRASTKTADYHLEFLDIV--VQQLVEKVRAG 4593 Query: 306 AKLL 309 + L Sbjct: 4592 SHRL 4581 Database: genome.fa Posted date: Jan 19, 2010 5:13 PM Number of letters in database: 89,612,356 Number of sequences in database: 32,746 Lambda K H 0.319 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,241,619 Number of Sequences: 32746 Number of extensions: 603608 Number of successful extensions: 2326 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2324 length of query: 369 length of database: 29,870,785 effective HSP length: 108 effective length of query: 261 effective length of database: 26,334,217 effective search space: 6873230637 effective search space used: 6873230637 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)