TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000106_1.0 # Protein # SECIS binding protein 2 (SBP2) #
Mus musculus # Complete
         (858 letters)

Database: genome.fa 
           32,746 sequences; 89,612,356 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAHK01000462.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    42   0.005
gb|AAHK01001187.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    37   0.21 
gb|AAHK01000349.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    36   0.36 
gb|AAHK01000247.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    35   0.47 
gb|AAHK01001131.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    35   0.80 
gb|AAHK01000183.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    34   1.0  
gb|AAHK01003031.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    34   1.4  
gb|AAHK01000350.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    34   1.4  
gb|AAHK01001421.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   1.8  
gb|AAHK01000542.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   1.8  
gb|AAHK01002438.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   1.8  
gb|AAHK01000212.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   2.3  
gb|AAHK01000007.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   2.3  
gb|AAHK01000253.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   3.0  
gb|AAHK01000167.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   3.0  
gb|AAHK01000125.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   3.0  
gb|AAHK01000064.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   3.0  
gb|AAHK01000009.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   3.0  
gb|AAHK01026784.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   4.0  
gb|AAHK01017664.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   4.0  
gb|AAHK01005675.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   4.0  
gb|AAHK01000816.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   5.2  
gb|AAHK01000101.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   5.2  
gb|AAHK01007549.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   6.7  
gb|AAHK01000935.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   6.7  
gb|AAHK01000778.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   6.7  
gb|AAHK01000560.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   6.7  
gb|AAHK01000059.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   6.7  
gb|AAHK01007113.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    31   8.8  
gb|AAHK01002148.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    31   8.8  
gb|AAHK01000595.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    31   8.8  
gb|AAHK01000130.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    31   8.8  
gb|AAHK01000015.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    31   8.8  

>gb|AAHK01000462.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507649, whole genome
             shotgun sequence
          Length = 34267

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 30/129 (23%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
 Frame = -1

Query: 225   PELQSPKNSNMPETQKPPRWGPLGPAASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVTS 284
             P  + P++   P  +KPPR+ P  PA S           V   + G    S  +  + +S
Sbjct: 22957 PPRKPPRSPPRPP-RKPPRFPPRNPACS-----------VRCSLVGCSHSSSSSSTSSSS 22814

Query: 285   NATTSSPSCTQELSWTP-MGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVTS 343
             ++++SS S +  L W   + ++  +T+S  S++++ + +S  +   ++SS  + + S +S
Sbjct: 22813 SSSSSSSSTSSSLGWAAGLPFLSLKTISPSSSSSSSSSSSSSSSSSSSSSPSSSSSSSSS 22634

Query: 344   EALSSNPSY 352
              ++SS+ ++
Sbjct: 22633 SSISSSSAW 22607


>gb|AAHK01001187.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510859, whole genome
            shotgun sequence
          Length = 15914

 Score = 36.6 bits (83), Expect = 0.21
 Identities = 30/130 (23%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
 Frame = +3

Query: 225  PELQSPKNSNMPETQKPPRWGPLGPAAS-NMPLLGDVGKPVADMVEGKMVKSDHTDGAVT 283
            P  + P++   P  +KPPR+ P  PA S    L+G                S  +  + +
Sbjct: 912  PPRKPPRSPPRPP-RKPPRFPPRNPACSVRCSLVG------CSHSSSSSSTSSSSSSSSS 1070

Query: 284  SNATTSSPSCTQELSWTP-MGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVT 342
            S++++SS S +  L W   + ++  +T+S  S++++ + +S      ++SS  + + S +
Sbjct: 1071 SSSSSSSSSTSSSLGWAAGLPFLSLKTISPSSSSSSSSSSS------SSSSPSSSSSSSS 1232

Query: 343  SEALSSNPSY 352
            S ++SS+ ++
Sbjct: 1233 SSSISSSSAW 1262


>gb|AAHK01000349.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509967, whole genome
             shotgun sequence
          Length = 40144

 Score = 35.8 bits (81), Expect = 0.36
 Identities = 33/121 (27%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
 Frame = -3

Query: 559   TVASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQ 618
             T   DD +++  G      +   P  P  T  SVS      GE+     +   ++  AC 
Sbjct: 31502 TAPDDDEKEIAEGGGVVGAA---PPPPTITRSSVS------GETTTIGSSCASKEGFACG 31350

Query: 619   PAPDSATFPKIHSRRFRDYCSQMLSKEVDACVTGLLK--ELVRFQDRMYQKDPVKAKTKR 676
               P S  FP   S+RFR  C +    EV + VT   K  + VR + R+  K+   +  + 
Sbjct: 31349 SVPSSVRFPSFESKRFRFSCKE---AEVCSVVTPTFKDGDKVRLRLRVGDKESSASSRET 31179

Query: 677   R 677
             R
Sbjct: 31178 R 31176


>gb|AAHK01000247.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508871, whole genome
            shotgun sequence
          Length = 47085

 Score = 35.4 bits (80), Expect = 0.47
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = -3

Query: 303  GYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVTSEALSSNP 350
            G  VR+ V+ DSAA+ ENV S +  + T+ S   +   VTS   +S P
Sbjct: 6079 GISVRRHVAWDSAASRENVESTVRTRSTSESGTVQISPVTSSCAASEP 5936


>gb|AAHK01001131.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508243, whole genome
             shotgun sequence
          Length = 16905

 Score = 34.7 bits (78), Expect = 0.80
 Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
 Frame = +1

Query: 96    YTLESAQSVCSVPTLQYDY-------SQARCHPGFRTAKPRHEHVCPPPQEAKGVFKKKP 148
             +TLE A+  CS+    +D+       S  R  P   TA+P   + CPP           P
Sbjct: 15280 HTLEMARR-CSLMLHCFDHHSRHLAPSHDRAPPMPTTAQPAASYSCPP----------SP 15426

Query: 149   SDERRACEEQKSSSRRADNAVPCEARPA 176
             S  R A E     SRR      C  RPA
Sbjct: 15427 SSYRHASERDPRPSRRCSQRHSCSVRPA 15510


>gb|AAHK01000183.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509695, whole genome
             shotgun sequence
          Length = 53491

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
 Frame = -3

Query: 582   PTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQPAPDSATFPKIHSRRFRDYCSQM 641
             P  P  T  SVS      GE+     +   ++  AC   P S  FP   S+RFR  C + 
Sbjct: 25268 PPPPTITRSSVS------GETTTIGSSYASKEGFACGSVPSSVRFPSFESKRFRFSCRE- 25110

Query: 642   LSKEVDACVTGLLK--ELVRFQDRMYQKDPVKAKTKRR 677
                EV   VT   K  + VR + R+  K+   +  + R
Sbjct: 25109 --AEVCNVVTPTFKDGDKVRLRPRLGDKESSASSRETR 25002


>gb|AAHK01003031.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053436341, whole
           genome shotgun sequence
          Length = 4029

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +2

Query: 564 DSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQPAPDS 623
           ++  V SG +  TP++    GP++ E         E ESE P   E   + E  +PA   
Sbjct: 620 NANSVPSGGAASTPAESESEGPKQAESESEGPKPAESESEGPKPAE--SESEGPKPAESE 793

Query: 624 ATFPK 628
           +  PK
Sbjct: 794 SEGPK 808


>gb|AAHK01000350.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508857, whole genome
             shotgun sequence
          Length = 40134

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = -1

Query: 230   PKNSNMPETQKPPRWGPLGPAASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVTSNATTS 289
             P+ S  P T  PP   P+GP+ S+  +L   G P A +   K VK   + G+ +   +TS
Sbjct: 17913 PRLSGPPYTPPPPAV-PVGPSYSSGVVLAATGVPHAALPVVKRVKPSRSSGSSSFEGSTS 17737

Query: 290   SPS 292
             S S
Sbjct: 17736 SSS 17728


>gb|AAHK01001421.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508089, whole genome
             shotgun sequence
          Length = 12722

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = -3

Query: 230   PKNSNMPETQKPPRWGPLGPAASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVTSNATTS 289
             P+ S  P T  PP   P+GP+ S+  +L   G P A +   K VK   + G+ +   +TS
Sbjct: 12042 PRLSGPPYTPPPPAV-PVGPSYSSGVVLAATGVPHAALPVVKRVKPSRSSGSSSFERSTS 11866

Query: 290   SPS 292
             S S
Sbjct: 11865 SSS 11857


>gb|AAHK01000542.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507017, whole genome
             shotgun sequence
          Length = 31031

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
 Frame = -1

Query: 263   PVADMVEGKMVKSDHTDGAVTSNATTSSPSCTQELSWTPMGYIVRQTVSSDSAAATENVT 322
             P+ D +    V S    G   SN + SS +  Q+         VRQ     S A  ++  
Sbjct: 18434 PLHDAMRYLRVLSTEPQGVDLSNCSLSSAAQQQDQQRRSRNDSVRQ-----SQATIDDAE 18270

Query: 323   SMINLKKTTSSADAKNVSVTSEALSSNPSYNREKRVYPA-PKAKASQGGELEQ 374
               +  + T  + DA   +V S ALS NP+Y   K V+ A P   + Q  ELE+
Sbjct: 18269 DRVKSELTAMALDAW-YTVYSSALSKNPTYMPTKDVFLAEPLVVSLQPPELER 18114


>gb|AAHK01002438.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507605, whole genome
            shotgun sequence
          Length = 5886

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
 Frame = +3

Query: 88   LHPFAYPTYTLESAQSVCSVPTLQYDYSQARCHPGF-------RTAKPRHEHVCPPPQEA 140
            L  F    +TLE A+  CS+    +D+      P          TA+P   + CPP    
Sbjct: 3624 LDDFPLCHHTLEMARR-CSLMLHCFDHHSRHLAPSHDRATSMPATAQPAASYSCPP---- 3788

Query: 141  KGVFKKKPSDERRACEEQKSSSRRADNAVPCEARPA 176
                   PS  R A E     SRR      C  RPA
Sbjct: 3789 ------SPSSYRHASERDPRPSRRCSQRHSCSVRPA 3878


>gb|AAHK01000212.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509699, whole genome
             shotgun sequence
          Length = 50552

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 18/156 (11%)
 Frame = +1

Query: 221   RLDFPELQSPKNSNMPETQKP-----------PRWGPL--GPAASNMPLLGDVGKPVADM 267
             R D P    P +   P T KP           PR   L  GP  S++P  G V KP  D 
Sbjct: 27919 RSDIP----PPSPPQPPTAKPVDAIVNAPILHPRATGLQPGPGHSDLPTAGPVAKPGNDG 28086

Query: 268   VEGKMVKSDHTDGAVTSNATTSS--PSCTQELSWTPMGYIVRQTVSSDSAAATENVTSM- 324
             VEG    S    G   +     S      ++ S T      R  VS  SA  T   T+  
Sbjct: 28087 VEGTGSASTAGQGPKVNTEPNKSLTEDTKEQQSRTEPSTEQRNKVSETSAQTTTTTTTTK 28266

Query: 325   -INLKKTTSSADAKNVSVT-SEALSSNPSYNREKRV 358
                   TT++ +A + + T + A+SS  + +R + +
Sbjct: 28267 PPTTTTTTTAPEAPSTTTTEAPAVSSTHAPSRLREI 28374


>gb|AAHK01000007.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510359, whole genome
              shotgun sequence
          Length = 144423

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +2

Query: 283    TSNATTSSPSCTQELSWTPMGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVT 342
              TSN + +  +  +E+  TP G     + S++S  A +NVT+ IN    T S  +  VS T
Sbjct: 140165 TSNESVTQNAVDKEVETTPDGTNNTASESNNSTKAPDNVTNKINTVTLTDSDGSTEVSHT 140344

Query: 343    SEAL 346
              +  L
Sbjct: 140345 TYPL 140356



 Score = 32.0 bits (71), Expect = 5.2
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +3

Query: 283   TSNATTSSPSCTQELSWTPMGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVT 342
             TSN + +  +  +E+  TP G     + S++S  A +NVT+ IN    T S  +  VS T
Sbjct: 95220 TSNESVTQNAVDKEVEKTPDGTNNTASESNNSTKAPDNVTNKINTVTLTDSDVSTAVSHT 95399

Query: 343   SEAL 346
             +  L
Sbjct: 95400 TSPL 95411


>gb|AAHK01000253.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053505807, whole genome
             shotgun sequence
          Length = 46623

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
 Frame = -1

Query: 263   PVADMVEGKMVKSDHTDGAVTSNATTSSPSCTQELSWTPMGYIVRQTVSSDSAAATENVT 322
             P+ D +    V S    GA  SN + SS +  Q+         V Q     S A  ++  
Sbjct: 44214 PLHDAMRYLRVLSTEPQGADLSNRSPSSAAQQQDQQRRSRNGSVHQ-----SQATIDDAE 44050

Query: 323   SMINLKKTTSSADAKNVSVTSEALSSNPSYNREKRVYPA-PKAKASQGGELEQ 374
               +  + T  + DA   +V S ALS NP+Y   K V+ A P   + Q  ELE+
Sbjct: 44049 DRVRSELTAMALDAW-YTVYSSALSKNPTYMPTKDVFLAEPLVVSLQPPELER 43894


>gb|AAHK01000167.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510661, whole genome
             shotgun sequence
          Length = 56794

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 38/141 (26%), Positives = 54/141 (38%), Gaps = 12/141 (8%)
 Frame = -3

Query: 195   YHKRPDRKSRILAKSASTSKPEF-----------EFSRLDFPELQSPKNSNMPETQKPPR 243
             +H  P+  S+ L+   STS P             E+ R   P +Q+P+   + E   P R
Sbjct: 45311 HHTDPNVVSQPLSPKRSTSPPPSSPGQMRRRLSDEYQRTPSP-VQTPRFFGVDELDYPHR 45135

Query: 244   WGPLGPAASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVTSNATTSSPSCTQELSWTPMG 303
              G  G  A + P      KPV D     M    H      ++  T SP     L    + 
Sbjct: 45134 AGSPGCIAPSSPSASSHVKPVVD----PMAPVPHVS---NNSGATVSPPAAHSLGDLNLD 44976

Query: 304   YIVRQT-VSSDSAAATENVTS 323
              I+    VS D  A+ E VT+
Sbjct: 44975 TIINAAMVSGDVFASIETVTN 44913


>gb|AAHK01000125.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506755, whole genome
             shotgun sequence
          Length = 63141

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 21/95 (22%), Positives = 38/95 (40%)
 Frame = +2

Query: 559   TVASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQ 618
             T    + ++++  +   T +  N     ++  + S+T       E+P     Q +P    
Sbjct: 46409 TTTQINEKEIQDSSVKLTTASQNHMARRQSRSACSATTTPVSTMEQPTSARSQAEPVKLV 46588

Query: 619   PAPDSATFPKIHSRRFRDYCSQMLSKEVDACVTGL 653
             PAP +A  P        D  S +LS+ +  CV  L
Sbjct: 46589 PAP-AAVSPDSLGNNSADVSSPILSEALGFCVAYL 46690


>gb|AAHK01000064.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508999, whole genome
             shotgun sequence
          Length = 79000

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 43/197 (21%), Positives = 71/197 (36%), Gaps = 5/197 (2%)
 Frame = +1

Query: 229   SPKNSNMPETQKPPRWGPLGPA-----ASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVT 283
             SP+ +N PET       PL P+     AS MP      KP A+  E    + D  D   T
Sbjct: 12964 SPRKNNFPETGVHSGKTPLAPSLPKSQASAMP------KPKAE--EQSSTEQDTEDSPDT 13119

Query: 284   SNATTSSPSCTQELSWTPMGYIVRQTVSSDSAAATENVTSMINLKKTTSSADAKNVSVTS 343
                TT   +    +        +  + SS ++      T+ I  +   + +  ++   TS
Sbjct: 13120 EEVTTGKENVQNTVETG-----IPSSSSSTASKPPVQQTTPILTQSPAAPSPERSAPATS 13284

Query: 344   EALSSNPSYNREKRVYPAPKAKASQGGELEQXXXXXXXXXXXXXXXPSYEVLTVQEPPRI 403
             E  S+ PS++  +    A     +   E  +               PS + L  Q+ P  
Sbjct: 13285 EEKSTAPSFSAGEGSRRATNVAQNSKEEKNEKLPSENETESKAVEQPSGDDLAEQDSPVG 13464

Query: 404   EDAEEFPNLSVASERRH 420
               A   P  S A  +++
Sbjct: 13465 TTASPIPASSSADAQKN 13515



 Score = 32.7 bits (73), Expect = 3.0
 Identities = 49/205 (23%), Positives = 75/205 (36%), Gaps = 13/205 (6%)
 Frame = -3

Query: 229   SPKNSNMPETQKPPRWGPLGPA-----ASNMPLLGDVGKPVADMVEGKMVKSDHTDGAVT 283
             SP+ +N PET       PL P+     AS MP      KP A+  E    + D  D   T
Sbjct: 29333 SPRKNNFPETGVHSGKTPLAPSLPKSQASAMP------KPKAE--EQSSTEQDTEDSPDT 29178

Query: 284   SNATTSSPSCTQELSWTPMGYIVRQTV-----SSDSAAATE---NVTSMINLKKTTSSAD 335
                TT                 V+ TV     SS S+AA++     T+ I  +   + + 
Sbjct: 29177 EEVTTGKEK-------------VQNTVETGIPSSSSSAASKPPVQQTTPILTQSPAAPSP 29037

Query: 336   AKNVSVTSEALSSNPSYNREKRVYPAPKAKASQGGELEQXXXXXXXXXXXXXXXPSYEVL 395
              ++   TSE  S+ PS++  +    A     +   E  +               PS + L
Sbjct: 29036 ERSAPATSEEKSTAPSFSAGEGSRRATNVAQNSKEEKNEKLPSENETESKAVEQPSGDDL 28857

Query: 396   TVQEPPRIEDAEEFPNLSVASERRH 420
               Q+ P    A   P  S A  +++
Sbjct: 28856 AEQDSPVGTTASPIPASSSADAQKN 28782


>gb|AAHK01000009.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511255, whole genome
             shotgun sequence
          Length = 137008

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 21/62 (33%), Positives = 23/62 (37%)
 Frame = +1

Query: 115   SQARCHPGFRTAKPRHEHVCPPPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEAR 174
             S  R  P   TA+P   + CPP           PS  R A E     SRR      C  R
Sbjct: 61141 SHDRAAPMSTTAQPAASYSCPP----------SPSSYRHASETDPRPSRRCPQRNSCSVR 61290

Query: 175   PA 176
             PA
Sbjct: 61291 PA 61296


>gb|AAHK01026784.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053444527, whole
           genome shotgun sequence
          Length = 800

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
 Frame = +2

Query: 561 ASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEP------AGTEFQRDP 614
           A+ ++  V SG +  TP++     P+  E         E ESEEP      A T   R+ 
Sbjct: 98  ATLNTSSVPSGGAASTPAEPKSEEPKPAESESEEPKPAESESEEPKPAEPNAATSSAREG 277

Query: 615 EACQPA 620
            A QPA
Sbjct: 278 TADQPA 295


>gb|AAHK01017664.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053403583, whole
           genome shotgun sequence
          Length = 948

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
 Frame = -1

Query: 561 ASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEP------AGTEFQRDP 614
           A+ ++  V SG +  TP++     P+  E         E ESEEP      A T   R+ 
Sbjct: 450 ATLNTSSVPSGGAASTPAEPKSEEPKPAESESEEPKPAESESEEPKPAEPNAATSSAREG 271

Query: 615 EACQPA 620
            A QPA
Sbjct: 270 TADQPA 253


>gb|AAHK01005675.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053444531, whole
           genome shotgun sequence
          Length = 1574

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
 Frame = +1

Query: 561 ASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEP------AGTEFQRDP 614
           A+ ++  V SG +  TP++     P+  E         E ESEEP      A T   R+ 
Sbjct: 28  ATLNTSSVPSGGAASTPAEPKSEEPKPAESESEEPKPAESESEEPKPAEPNAATSSAREG 207

Query: 615 EACQPA 620
            A QPA
Sbjct: 208 TADQPA 225


>gb|AAHK01000816.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510475, whole genome
            shotgun sequence
          Length = 22976

 Score = 32.0 bits (71), Expect = 5.2
 Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
 Frame = +2

Query: 221  RLDFPELQSPKNSNMPETQKP-----------PRWGPL--GPAASNMPLLGDVGKPVADM 267
            R D P    P +   P T KP           PR   L  GP  S++P  G V KP  D 
Sbjct: 4331 RSDIP----PPSPPQPPTAKPVDAIVSAPILHPRATGLQPGPGHSDLPTAGPVAKPGNDG 4498

Query: 268  VEGKMVKSDHTDGAVTSNATTSS--PSCTQELSWTPMGYIVRQTVSSDSAAATENVTSMI 325
            VEG    S    G   +     S      ++ S T      R  VS  SA  T   T+  
Sbjct: 4499 VEGTGSASTAGQGPKVNTEPNKSLTEDTKEQQSRTEPSTEQRNKVSETSAQTTTTTTTTK 4678

Query: 326  NLKKTTSSADAKNVSVTS 343
                TT++   +  S T+
Sbjct: 4679 PPTTTTTTTAPEAPSTTT 4732


>gb|AAHK01000101.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507959, whole genome
             shotgun sequence
          Length = 67754

 Score = 32.0 bits (71), Expect = 5.2
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 396   TVQEPPRIEDAEEFPNLSVASERRHRGQSPKLHSK---QQTQNEFKTSGKK 443
             TVQEPP ++  E  P   +++E    G+  K   K    +T  E KT+ KK
Sbjct: 31769 TVQEPPAVKLRENVPAELISTEDAAEGEKQKAEEKAEEAETNEEQKTTAKK 31921


>gb|AAHK01007549.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053443899, whole
           genome shotgun sequence
          Length = 1315

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = +1

Query: 564 DSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEP------AGTEFQRDPEAC 617
           ++  V SG +  TP++     P+  E         E ESEEP      A T   R+  A 
Sbjct: 718 NTSSVPSGGAASTPAEPKSEEPKPAESRPEEPEPAESESEEPKPAEPNAATSSAREGTAD 897

Query: 618 QPA 620
           QPA
Sbjct: 898 QPA 906


>gb|AAHK01000935.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509195, whole genome
             shotgun sequence
          Length = 20235

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 555   AVSLTVASDDSQDVESGASNQTPSQDNPTGPEKTEESVSST 595
             A S T  +       + AS+QTP   +PT P KT +S SST
Sbjct: 10048 AGSTTAGNQYGTGSSAAASSQTPRAADPTSPLKTGDSASST 9926


>gb|AAHK01000778.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509033, whole genome
            shotgun sequence
          Length = 24091

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
 Frame = +3

Query: 560  VASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAG--------TEFQ 611
            V+   S+     AS++T  +    GP  TE S S+   + GE++ PAG        T   
Sbjct: 2442 VSGKQSRAPTQRASHKTIRKGRHKGPSHTENSNSNNTAIHGENKFPAGHSGLHSNATNRS 2621

Query: 612  RDPEACQPA 620
              P AC  A
Sbjct: 2622 VQPSACSSA 2648


>gb|AAHK01000560.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510531, whole genome
            shotgun sequence
          Length = 30390

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 16/56 (28%), Positives = 32/56 (57%)
 Frame = +1

Query: 561  ASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEA 616
            AS     +E   +N +P +++  G ++T+  ++S   ++GE +EP  T F ++P A
Sbjct: 5371 ASLQRMPLEGKVNNASPPKNDEQGLQQTK--LTSQKQIQGEEKEPPTTSFSKEPLA 5532


>gb|AAHK01000059.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510307, whole genome
             shotgun sequence
          Length = 83489

 Score = 31.6 bits (70), Expect = 6.7
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -2

Query: 561   ASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQRDPEACQPA 620
             A+ ++  V SG +  TP++    GP+  E   +     E +S EP   E    P++ +P 
Sbjct: 61912 ATLNTSSVPSGGAPSTPAEPKSAGPKPAEPKSAGPKPAEPKSAEPKPAE----PKSAEPK 61745

Query: 621   P 621
             P
Sbjct: 61744 P 61742


>gb|AAHK01007113.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053434965, whole
           genome shotgun sequence
          Length = 1359

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -2

Query: 561 ASDDSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEPAGTEFQ-RDPEACQP 619
           A+ ++  V SG +  TP++     P+  E         E ESEEP   E +  +P+  +P
Sbjct: 845 ATLNTSSVPSGGAPPTPAEPKSEEPKPAESGSEEPKPAESESEEPKPAESESEEPKPAEP 666


>gb|AAHK01002148.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053504341, whole genome
            shotgun sequence
          Length = 7161

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
 Frame = -2

Query: 564  DSQDVESGASNQTPSQDNPTGPEKTEESVSSTPVVEGESEEP------AGTEFQRDPEAC 617
            ++  V SG +  TP++     P+  E         E ESEEP      A T   R+  A 
Sbjct: 2261 NTSSVPSGGAPPTPAEPKSEEPKPAESRPEEPKPAESESEEPKPAEPNAATSSAREGTAD 2082

Query: 618  QPA 620
            QPA
Sbjct: 2081 QPA 2073


>gb|AAHK01000595.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509529, whole genome
             shotgun sequence
          Length = 29259

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 1/130 (0%)
 Frame = +3

Query: 124   RTAKPRHEHVCPPPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEARPARGXXXXX 183
             RTA P      PPP     + +   +  RR+    +S+ R A    P  AR A+      
Sbjct: 21516 RTAPPARSRRSPPPPHRASLLRPSRTARRRSA-TTRSAQRSARRPAPSTARKAQDSRRPA 21692

Query: 184   XXXXXXXXXDGYHKR-PDRKSRILAKSASTSKPEFEFSRLDFPELQSPKNSNMPETQKPP 242
                          +R P   SR   ++ ST  P+   +R + P+ ++P+ +    T+   
Sbjct: 21693 QRGAASPRSRRQAQRTPTAPSRPRGRTHSTQCPQRAAAR-ELPQARTPRRARRCRTRTRT 21869

Query: 243   RWGPLGPAAS 252
                   P+ S
Sbjct: 21870 HRSSCSPSPS 21899


>gb|AAHK01000130.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053505997, whole genome
             shotgun sequence
          Length = 62042

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -2

Query: 107   VPTLQYDYSQARCHPGFRTAKPRHEHVCPPPQEAKGVFKKKPSDERRACEEQKSSSRRAD 166
             +P   ++  ++R HP F+TA+P   H C P              +RR CE+   S R A 
Sbjct: 36157 IPDAAHNRIRSR-HPAFQTARP-STHRCSP--------------DRRLCEDDPDSRRSAR 36026

Query: 167   NAVPC 171
             N   C
Sbjct: 36025 NPTHC 36011


>gb|AAHK01000015.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053504081, whole genome
             shotgun sequence
          Length = 122583

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 21/62 (33%), Positives = 23/62 (37%)
 Frame = -3

Query: 115   SQARCHPGFRTAKPRHEHVCPPPQEAKGVFKKKPSDERRACEEQKSSSRRADNAVPCEAR 174
             S  R  P   TA+P   + CP            PS  R A E    SSRR      C  R
Sbjct: 65866 SHDRAAPMPTTAQPAASYSCP-----------SPSSYRHASETDPRSSRRCSRRHSCSVR 65720

Query: 175   PA 176
             PA
Sbjct: 65719 PA 65714


  Database: genome.fa
    Posted date:  Jan 19, 2010  5:13 PM
  Number of letters in database: 89,612,356
  Number of sequences in database:  32,746
  
Lambda     K      H
   0.311    0.126    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,176,113
Number of Sequences: 32746
Number of extensions: 1588457
Number of successful extensions: 9882
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4583
Number of HSP's successfully gapped in prelim test: 668
Number of HSP's that attempted gapping in prelim test: 2983
Number of HSP's gapped (non-prelim): 8158
length of query: 858
length of database: 29,870,785
effective HSP length: 115
effective length of query: 743
effective length of database: 26,104,995
effective search space: 19396011285
effective search space used: 19396011285
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)