TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000037_1.0 # Protein # SECIS binding protein 2 (SBP2) # Homo sapiens # Complete (854 letters) Database: genome.fa 32,746 sequences; 89,612,356 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAHK01022292.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 35 0.79 gb|AAHK01017198.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 35 0.79 gb|AAHK01015934.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 35 0.79 gb|AAHK01010771.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 35 0.79 gb|AAHK01005846.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 35 0.79 gb|AAHK01006338.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 34 1.4 gb|AAHK01003850.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 34 1.4 gb|AAHK01020295.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 33 1.8 gb|AAHK01009941.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 33 1.8 gb|AAHK01009689.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 33 1.8 gb|AAHK01008378.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 33 1.8 gb|AAHK01000042.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 33 2.3 gb|AAHK01021898.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 33 3.0 gb|AAHK01022598.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 3.9 gb|AAHK01001046.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 3.9 gb|AAHK01000943.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 3.9 gb|AAHK01000660.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 3.9 gb|AAHK01000163.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 3.9 gb|AAHK01000039.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 3.9 gb|AAHK01020243.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 5.1 gb|AAHK01000505.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 5.1 gb|AAHK01011560.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 6.7 gb|AAHK01009443.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 32 6.7 gb|AAHK01023241.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 31 8.8 gb|AAHK01000392.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 31 8.8 gb|AAHK01000322.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 31 8.8 >gb|AAHK01022292.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053467401, whole genome shotgun sequence Length = 884 Score = 34.7 bits (78), Expect = 0.79 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Frame = -3 Query: 273 KNNPNESVTANAATNSPSCTRELSWT-------PMGYVVRQTLSTELSAAPKNVTSMINL 325 KN + T+ + +P T + T P T +T S APKN T+ Sbjct: 414 KNTTTTTTTSTTTSKAPKNTTTTTTTSTTTSKAPKNTTTTTTRTTATSKAPKNTTTTTTT 235 Query: 326 KTIASSADPKNVSIPSSEA 344 T SSA PKN + +S+A Sbjct: 234 STTTSSA-PKNTTTTTSKA 181 >gb|AAHK01017198.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053415097, whole genome shotgun sequence Length = 954 Score = 34.7 bits (78), Expect = 0.79 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Frame = +1 Query: 273 KNNPNESVTANAATNSPSCTRELSWT-------PMGYVVRQTLSTELSAAPKNVTSMINL 325 KN + T+ + +P T + T P T +T S APKN T+ Sbjct: 643 KNTTTTTTTSTTTSKAPKNTTTTTTTSTTTSKAPKNTTTTTTRTTATSKAPKNTTTTTTT 822 Query: 326 KTIASSADPKNVSIPSSEA 344 T SSA PKN + +S+A Sbjct: 823 STTTSSA-PKNTTTTTSKA 876 >gb|AAHK01015934.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053414951, whole genome shotgun sequence Length = 971 Score = 34.7 bits (78), Expect = 0.79 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Frame = -1 Query: 273 KNNPNESVTANAATNSPSCTRELSWT-------PMGYVVRQTLSTELSAAPKNVTSMINL 325 KN + T+ + +P T + T P T +T S APKN T+ Sbjct: 251 KNTTTTTTTSTTTSKAPKNTTTTTTTSTTTSKAPKNTTTTTTRTTATSKAPKNTTTTTTT 72 Query: 326 KTIASSADPKNVSIPSSEA 344 T SSA PKN + +S+A Sbjct: 71 STTTSSA-PKNTTTTTSKA 18 >gb|AAHK01010771.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053404469, whole genome shotgun sequence Length = 1101 Score = 34.7 bits (78), Expect = 0.79 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Frame = +3 Query: 273 KNNPNESVTANAATNSPSCTRELSWT-------PMGYVVRQTLSTELSAAPKNVTSMINL 325 KN + T+ + +P T + T P T +T S APKN T+ Sbjct: 354 KNTTTTTTTSTTTSKAPKNTTTTTTTSTTTSKAPKNTTTTTTRTTATSKAPKNTTTTTTT 533 Query: 326 KTIASSADPKNVSIPSSEA 344 T SSA PKN + +S+A Sbjct: 534 STTTSSA-PKNTTTTTSKA 587 >gb|AAHK01005846.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053406567, whole genome shotgun sequence Length = 1540 Score = 34.7 bits (78), Expect = 0.79 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Frame = +1 Query: 754 GAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQAPPSLPTQG-PSCPAEDGPPAL 812 G QD+F E+T R +ENV+ ELV A PS+ T+G S PA+ GP Sbjct: 1168 GVQDEFPAEEEVTEGDRSDKGGKMENVE-ELVKSQPATATPSVTTEGVASSPADAGPEDS 1344 Query: 813 KEKEE 817 +E E Sbjct: 1345 QEDGE 1359 >gb|AAHK01006338.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053468005, whole genome shotgun sequence Length = 1464 Score = 33.9 bits (76), Expect = 1.4 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 3/114 (2%) Frame = -3 Query: 257 EVVKPAAVLSKGEIVVKN---NPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELS 313 + KP V +K V N ES N +S + + + + TP+ + + L ++ Sbjct: 1261 KTAKPIGVYTKSSQVFATPSMNSTESTPLNGHKHSSNVSWKRTHTPVSFSIPNGLFSQPQ 1082 Query: 314 AAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKAS 367 A + SM+ + PKN++ +S A SS K + PTQ S+ + Sbjct: 1081 VANSSQPSMMRVDAPPFEPSPKNMAATASYAASSPMG----KRGVTPTQVSQTN 932 >gb|AAHK01003850.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053457023, whole genome shotgun sequence Length = 2447 Score = 33.9 bits (76), Expect = 1.4 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 3/114 (2%) Frame = -2 Query: 257 EVVKPAAVLSKGEIVVKN---NPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELS 313 + KP V +K V N ES N +S + + + + TP+ + + L ++ Sbjct: 1306 KTAKPIGVYTKSSQVFATPSMNSTESTPLNGHKHSSNISWKRTHTPVSFSIPNGLFSQPQ 1127 Query: 314 AAPKNVTSMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKAS 367 A + SM+ + PKN++ +S A SS K + PTQ S+ + Sbjct: 1126 VANSSQPSMMRVDAPPFEPSPKNMAATASYAASSPMG----KRGVTPTQVSQTN 977 >gb|AAHK01020295.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053434881, whole genome shotgun sequence Length = 912 Score = 33.5 bits (75), Expect = 1.8 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = -1 Query: 307 TLSTELSAAPKNVTSMINLKTIASSADPKN--VSIPSSEALSSDPSYNKEKHIIHPTQKS 364 T ST S APKN T+ +T A+S PKN + +S SS P PT + Sbjct: 756 TTSTTTSNAPKNTTTTTTTRTTATSKAPKNTTTTTTTSTTTSSAPKNTTTTTSKAPTPED 577 Query: 365 KASQG 369 S G Sbjct: 576 ARSPG 562 >gb|AAHK01009941.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053413519, whole genome shotgun sequence Length = 1141 Score = 33.5 bits (75), Expect = 1.8 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +2 Query: 275 NPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADP 334 +P ++ T T++ + S P T +T S APKN T+ T SSA P Sbjct: 683 DPKKNTTTTTTTSTTT-----SKAPKNTTTTTTRTTATSKAPKNTTTTTTTSTTTSSA-P 844 Query: 335 KNVSIPSSEA 344 KN + +S+A Sbjct: 845 KNTTTTTSKA 874 >gb|AAHK01009689.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053433927, whole genome shotgun sequence Length = 1155 Score = 33.5 bits (75), Expect = 1.8 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +2 Query: 275 NPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADP 334 +P ++ T T++ + S P T +T S APKN T+ T SSA P Sbjct: 431 DPKKNTTTTTTTSTTT-----SSAPKNTTTTTTRTTATSKAPKNTTTTTTTSTTTSSA-P 592 Query: 335 KNVSIPSSEA 344 KN + +S+A Sbjct: 593 KNTTTTTSKA 622 >gb|AAHK01008378.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053430225, whole genome shotgun sequence Length = 1241 Score = 33.5 bits (75), Expect = 1.8 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +1 Query: 275 NPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADP 334 +P ++ T T++ + S P T +T S APKN T+ T SSA P Sbjct: 868 DPKKNTTTTTTTSTTT-----SSAPKNTTTTTTRTTATSKAPKNTTTTTTTSTTTSSA-P 1029 Query: 335 KNVSIPSSEA 344 KN + +S+A Sbjct: 1030KNTTTTTSKA 1059 >gb|AAHK01000042.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506599, whole genome shotgun sequence Length = 90725 Score = 33.1 bits (74), Expect = 2.3 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = +3 Query: 778 ENVQQELVGEPRPQAPPSLPTQGPSCPA----EDGPPALKEKEEPHYIEIWKKHLEA 830 E Q L P P PP LP G P+ E GP A KE + ++ KK LEA Sbjct: 30138 EGAPQSLSAPPPPPPPPPLPPSGGPAPSSTAVEGGPTAEKENLQ----KVTKKDLEA 30296 >gb|AAHK01021898.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053432289, whole genome shotgun sequence Length = 890 Score = 32.7 bits (73), Expect = 3.0 Identities = 21/66 (31%), Positives = 29/66 (43%) Frame = -1 Query: 279 SVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVS 338 S T + + + S P T +T S APKN T+ T SSA PKN + Sbjct: 890 SKAPKTTTTTTTTSTTTSKAPKNTTTTTTRTTATSKAPKNTTTTTTTSTTTSSA-PKNTT 714 Query: 339 IPSSEA 344 +S+A Sbjct: 713 TTTSKA 696 >gb|AAHK01022598.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053406031, whole genome shotgun sequence Length = 880 Score = 32.3 bits (72), Expect = 3.9 Identities = 24/80 (30%), Positives = 33/80 (41%) Frame = +3 Query: 590 TPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLL 649 TPS + + P G +R T A+HL P H RR R C+Q + KE D Sbjct: 357 TPS---RGQTPIGYLKRRATPATHLLRFEAHVPHYHQRRPRTVCTQQIVKERRIRQADSK 527 Query: 650 KELVRFQDRMYQKDPVKAKT 669 + R + K + KT Sbjct: 528 TSADKSHRRHHHKHQQRQKT 587 >gb|AAHK01001046.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506269, whole genome shotgun sequence Length = 18315 Score = 32.3 bits (72), Expect = 3.9 Identities = 24/80 (30%), Positives = 33/80 (41%) Frame = -1 Query: 590 TPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLL 649 TPS + + P G +R T A+HL P H RR R C+Q + KE D Sbjct: 10794 TPS---RGQTPIGYLKRRATPATHLLRFEAHVPHYHQRRPRTVCTQQIVKERRIRQADSK 10624 Query: 650 KELVRFQDRMYQKDPVKAKT 669 + R + K + KT Sbjct: 10623 TSTDKSHRRHHHKHQQRQKT 10564 >gb|AAHK01000943.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503585, whole genome shotgun sequence Length = 20117 Score = 32.3 bits (72), Expect = 3.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = -3 Query: 779 NVQQELVGEPRPQAPPSLPTQGPSCPAEDGPP 810 N+ + +G+PR + P +LP Q S P GPP Sbjct: 13815 NLSRPSIGDPRARIPRTLPVQCVSVPVSRGPP 13720 >gb|AAHK01000660.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506267, whole genome shotgun sequence Length = 26943 Score = 32.3 bits (72), Expect = 3.9 Identities = 24/80 (30%), Positives = 33/80 (41%) Frame = -3 Query: 590 TPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDYCSQMLSKEVDACVTDLL 649 TPS + + P G +R T A+HL P H RR R C+Q + KE D Sbjct: 7465 TPS---RGQTPIGYLKRRATPATHLLRFEAHVPHYHQRRPRTVCTQQIVKERRIRQADSK 7295 Query: 650 KELVRFQDRMYQKDPVKAKT 669 + R + K + KT Sbjct: 7294 TSADKSHRRHHHKHQQRQKT 7235 >gb|AAHK01000163.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510713, whole genome shotgun sequence Length = 57165 Score = 32.3 bits (72), Expect = 3.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 779 NVQQELVGEPRPQAPPSLPTQGPSCPAEDGPP 810 N+ Q G+PR + P +LP Q S P GPP Sbjct: 46443 NLSQSSTGDPRARIPRTLPVQCVSVPVGRGPP 46538 >gb|AAHK01000039.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506767, whole genome shotgun sequence Length = 92210 Score = 32.3 bits (72), Expect = 3.9 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Frame = +2 Query: 557 TSDDTQDGESGGDDQFPEQAELSGPEGMDELIS----TPSVEDKSEEPPGTE--LQRDTE 610 T + + G++G D S PEG D L TPS +K+EE GTE + +T Sbjct: 32693 TQSEDKAGKAGKDSGSTN----SNPEGQDHLTESPGKTPSPPEKNEEGRGTEDSQKMETL 32860 Query: 611 ASHLAPNHTTFPK 623 ASH T P+ Sbjct: 32861 ASHTTATVTETPQ 32899 Score = 32.3 bits (72), Expect = 3.9 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Frame = +3 Query: 557 TSDDTQDGESGGDDQFPEQAELSGPEGMDELIS----TPSVEDKSEEPPGTE--LQRDTE 610 T + + G++G D S PEG D L TPS +K+EE GTE + +T Sbjct: 47952 TQSEDKAGKAGKDSGSTN----SNPEGQDHLTESPGKTPSPPEKNEEGRGTEDSQKMETL 48119 Query: 611 ASHLAPNHTTFPK 623 ASH T P+ Sbjct: 48120 ASHTTATVTETPQ 48158 >gb|AAHK01020243.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053409461, whole genome shotgun sequence Length = 913 Score = 32.0 bits (71), Expect = 5.1 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -2 Query: 307 TLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEA 344 T ST S+APKN T+ + +S+ PKN + +S+A Sbjct: 294 TTSTTTSSAPKNTTTTTTTTSTTTSSAPKNTTTTTSKA 181 >gb|AAHK01000505.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511257, whole genome shotgun sequence Length = 32308 Score = 32.0 bits (71), Expect = 5.1 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = -3 Query: 779 NVQQELVGEPRPQAPPSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSG 833 ++ Q G+PR + P +LP Q S P GPP E + +++ H +A SG Sbjct: 13424 SLSQSSTGDPRARIPRTLPVQCVSVPVSRGPP---E*SDHCRLDLMAWHRQAGSG 13269 >gb|AAHK01011560.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053414037, whole genome shotgun sequence Length = 1071 Score = 31.6 bits (70), Expect = 6.7 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = +1 Query: 307 TLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEA 344 T ST S APKN T+ T SSA PKN + +S+A Sbjct: 289 TTSTTTSKAPKNTTTTTTTSTTTSSA-PKNTTTTTSKA 399 >gb|AAHK01009443.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053421129, whole genome shotgun sequence Length = 1168 Score = 31.6 bits (70), Expect = 6.7 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = -2 Query: 307 TLSTELSAAPKNVTSMINLKTIASSADPKNVSIPSSEA 344 T ST S APKN T+ T SSA PKN + +S+A Sbjct: 441 TTSTTTSKAPKNTTTTTTTSTTTSSA-PKNTTTTTSKA 331 >gb|AAHK01023241.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053400923, whole genome shotgun sequence Length = 870 Score = 31.2 bits (69), Expect = 8.8 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 11/108 (10%) Frame = -3 Query: 274 NNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSAD 333 +NPN S TA+A+ CT + T Y + T LS + T L + AD Sbjct: 778 HNPNNSFTASASETPLRCTFQFFTTA*VYFSQATTDVSLSMSQSLNTP---LNSSGKGAD 608 Query: 334 PKNVSIPSSEALSSDPSYNKEKHIIH-----------PTQKSKASQGS 370 PS+ + P++N + +H +QKS + GS Sbjct: 607 CWAYFTPSTSSRIISPTFNLIEGAVHSAGERFTACTASSQKSSTAMGS 464 >gb|AAHK01000392.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509611, whole genome shotgun sequence Length = 37911 Score = 31.2 bits (69), Expect = 8.8 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 11/108 (10%) Frame = -3 Query: 274 NNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSAD 333 +NPN S TA+A+ CT + T Y + T LS + T L + AD Sbjct: 36709 HNPNNSFTASASETPLRCTFQFFTTA*VYFSQATTDVSLSMSQSLNTP---LNSSGKGAD 36539 Query: 334 PKNVSIPSSEALSSDPSYNKEKHIIH-----------PTQKSKASQGS 370 PS+ + P++N + +H +QKS + GS Sbjct: 36538 CWAYFTPSTSSRIISPTFNLIEGAVHSAGERFTACTASSQKSSTAMGS 36395 >gb|AAHK01000322.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506939, whole genome shotgun sequence Length = 41346 Score = 31.2 bits (69), Expect = 8.8 Identities = 24/111 (21%), Positives = 43/111 (38%) Frame = +1 Query: 261 PAAVLSKGEIVVKNNPNESVTANAATNSPSCTRELSWTPMGYVVRQTLSTELSAAPKNVT 320 PA +S GE NP S + T + S T + +T ++ T Sbjct: 33403 PAMAISAGE----TNPTASTGSQNTTETTSTTSPSNAKAEREATEKTSGNVAPNQNRHDT 33570 Query: 321 SMINLKTIASSADPKNVSIPSSEALSSDPSYNKEKHIIHPTQKSKASQGSD 371 L +++ P ++PS SD + NKE + + Q++ + + D Sbjct: 33571 DTPGLMKGTTTSRPAETAVPSVSKSGSDGAQNKEGKVDNGAQRTNSKEPQD 33723 Database: genome.fa Posted date: Jan 19, 2010 5:13 PM Number of letters in database: 89,612,356 Number of sequences in database: 32,746 Lambda K H 0.311 0.128 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,962,448 Number of Sequences: 32746 Number of extensions: 1319101 Number of successful extensions: 9409 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4487 Number of HSP's successfully gapped in prelim test: 440 Number of HSP's that attempted gapping in prelim test: 3067 Number of HSP's gapped (non-prelim): 7361 length of query: 854 length of database: 29,870,785 effective HSP length: 115 effective length of query: 739 effective length of database: 26,104,995 effective search space: 19291591305 effective search space used: 19291591305 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 69 (31.2 bits)