TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|70879148|gb|EAN92345.1| hypothetical protein, conserved
[Trypanosoma cruzi]
         (386 letters)

Database: genome.fa 
           697 sequences; 71,881,135 total letters

Searching.....................................................done

 ***** No hits found ******

  Database: genome.fa
    Posted date:  Feb 10, 2010 10:01 AM
  Number of letters in database: 71,881,135
  Number of sequences in database:  697
  
Lambda     K      H
   0.319    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,092,417
Number of Sequences: 697
Number of extensions: 269263
Number of successful extensions: 771
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 737
Number of HSP's gapped (non-prelim): 100
length of query: 386
length of database: 23,960,378
effective HSP length: 108
effective length of query: 278
effective length of database: 23,885,102
effective search space: 6640058356
effective search space used: 6640058356
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)