TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|267844904|ref|NP_058651.3| O-phosphoseryl-tRNA(Sec) selenium transferase [Homo sapiens] (501 letters) Database: genome.fa 5578 sequences; 78,051,097 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAQY01000053.1| Phytophthora sojae strain P6497 Psojae_Cont53... 262 e-106 gb|AAQY01001585.1| Phytophthora sojae strain P6497 Psojae_Cont15... 32 2.6 gb|AAQY01000535.1| Phytophthora sojae strain P6497 Psojae_Cont53... 32 2.6 gb|AAQY01001191.1| Phytophthora sojae strain P6497 Psojae_Cont11... 32 3.4 gb|AAQY01000221.1| Phytophthora sojae strain P6497 Psojae_Cont22... 31 5.9 gb|AAQY01001351.1| Phytophthora sojae strain P6497 Psojae_Cont13... 30 7.7 gb|AAQY01000349.1| Phytophthora sojae strain P6497 Psojae_Cont34... 30 7.7 >gb|AAQY01000053.1| Phytophthora sojae strain P6497 Psojae_Cont53, whole genome shotgun sequence Length = 75531 Score = 262 bits (670), Expect(2) = e-106 Identities = 130/254 (51%), Positives = 175/254 (68%), Gaps = 7/254 (2%) Frame = +3 Query: 1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAI 60 MN S A + LV YV+QG +A RS E L+ LL + + P+ GWD++++EL L L+ Sbjct: 22329 MNARSAALAQHLVPSTYVQQGLDAVRSREKLVTSLLAQRRLPDEGWDDASVELLLQTLSA 22508 Query: 61 MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS 120 MDSNNF G+ G GERE RV S LVARRH+ HG+GRSGD++AVQPKAAGSSLL ++ N+ Sbjct: 22509 MDSNNFRGSAGAGEREARVFSPLVARRHFYLAHGVGRSGDVAAVQPKAAGSSLLVQLANA 22688 Query: 121 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI 180 L D+++LAG+ V V+P+ATGMSLTL L L+ +P A+Y+IWPRIDQKSCFKS++ Sbjct: 22689 LAKDVLRLAGMRAVQAALVLPVATGMSLTLVLLQLKESKPHARYVIWPRIDQKSCFKSIV 22868 Query: 181 TAGFEPVVIENVL-------EGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPD 233 AG P+V+ NVL G L+TDL + A + + G D +L + STTSCFAPR D Sbjct: 22869 AAGLTPLVLANVLVEQEDGKPGGFLKTDLVGMTALMDQYGSDSVLAVMSTTSCFAPRAYD 23048 Query: 234 RLEELAVICANYDI 247 +EE+A +C ++ Sbjct: 23049 SVEEIAKLCEERNV 23090 Score = 143 bits (360), Expect(2) = e-106 Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 55/211 (26%) Frame = +1 Query: 249 HIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK 308 H++NNAYGVQ+SKC+H +++ R GR+DA VQSLDKNFMVPVGGAI+ + + ++K Sbjct: 23170 HVINNAYGVQASKCVHHVERAMRTGRVDAVVQSLDKNFMVPVGGAIVCSASREVVDRVAK 23349 Query: 309 MYPGRASASPSLDVLITLLSL------------------------GSNGYKKLLKERKEM 344 YPGRASA+P+LD IT+L + G +GYK+LL+ERK + Sbjct: 23350 FYPGRASATPTLDFFITMLQMVGQFDLCFVVVLGE*CYSTVMCCQGKHGYKRLLEERKHL 23529 Query: 345 FSYLSNQIKKLSEAYNERLL-------------------------HTPHNPISLAMTLKT 379 +Y++ Q++ L+ ER+L + H IS AMTL T Sbjct: 23530 AAYMNQQLETLAADERERVLLVSNNEVALVDCCVGGWQLGGISISNALHAQISFAMTLGT 23709 Query: 380 LD------EHRDKAVTQLGSMLFTRQVSGAR 404 + + + +T LG+MLF+R VSGAR Sbjct: 23710 FCSDVTDLQEKSRQLTLLGAMLFSRGVSGAR 23802 Score = 45.4 bits (106), Expect = 2e-04 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +2 Query: 392 GSMLFTRQVSGA---RVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVD 448 G +L SGA VV + ++GY F F +H + +P AY+ A A+GM+ +VD Sbjct: 23825 GGLLAVA*HSGACCSSVVSCLDRKAIAGYEFNAFGAHHDGFPVAYVTFACALGMQRGEVD 24004 Query: 449 LFIKRLDRCLKAVRKERSK 467 L + +L + + R +R K Sbjct: 24005 LLVTKLRKTIHEWRTKRVK 24061 >gb|AAQY01001585.1| Phytophthora sojae strain P6497 Psojae_Cont1585, whole genome shotgun sequence Length = 233777 Score = 32.0 bits (71), Expect = 2.6 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = -1 Query: 297 GFNDSFIQEISKMYPGR----ASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQI 352 GFND + I KM+ R A +P +VL L + S+ K L+K + ++S Sbjct: 189728 GFNDQITKTIRKMFNARLKYKAEGNPLQEVL--KLMMNSSYGKLLMKPIVKKKVFVSGGD 189555 Query: 353 KKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQ 390 KK+ +AY + +H + ++ L +EH KA++Q Sbjct: 189554 KKI-DAYTRKNIHRIISRTPISDNLVMFEEH--KALSQ 189450 >gb|AAQY01000535.1| Phytophthora sojae strain P6497 Psojae_Cont535, whole genome shotgun sequence Length = 138662 Score = 32.0 bits (71), Expect = 2.6 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = -3 Query: 312 GRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQ-IKKLSEAYNERLLHTPHNP 370 GR+ + ++ +S GY+ LL K + +Y Q I KL HNP Sbjct: 130545 GRSLPKRAEKAIVLGISTTQKGYRLLLPRTKRIITYPDLQNIDKLDI----------HNP 130396 Query: 371 ISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSG 402 ++ + + LDEH D + T + + T + G Sbjct: 130395 LTAEVLRELLDEHFDASATSTDTPVRTTEQEG 130300 >gb|AAQY01001191.1| Phytophthora sojae strain P6497 Psojae_Cont1191, whole genome shotgun sequence Length = 47776 Score = 31.6 bits (70), Expect = 3.4 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%) Frame = -3 Query: 296 AGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSN-GYKKLLKE---RKEMFSYLSNQ 351 AGF D + I KM+ R + L +L L N Y KLL + +K++F +S Sbjct: 31457 AGFTDQITKTIRKMFNARLKYKAEGNPLQAVLKLMMNSSYGKLLMKSIVKKKVF--VSGG 31284 Query: 352 IKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQ 390 KK+ +AY + +H + ++ L +EH KA++Q Sbjct: 31283 DKKI-DAYTRKNIHRMISRTPISDNLAMFEEH--KALSQ 31176 >gb|AAQY01000221.1| Phytophthora sojae strain P6497 Psojae_Cont221, whole genome shotgun sequence Length = 399879 Score = 30.8 bits (68), Expect = 5.9 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -3 Query: 218 LCIHSTTSCFAPRVPDRLEELAVICAN 244 LC S+T CFAP +P L IC N Sbjct: 58570 LCPSSSTFCFAPSLPSSLSRALCICIN 58490 >gb|AAQY01001351.1| Phytophthora sojae strain P6497 Psojae_Cont1351, whole genome shotgun sequence Length = 178562 Score = 30.4 bits (67), Expect = 7.7 Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 7/88 (7%) Frame = -3 Query: 147 SLTLC---FLTLRHKRPKAKYIIWPRI----DQKSCFKSMITAGFEPVVIENVLEGDELR 199 SL +C +L + + K + ++ + D++ FK + + E VV+ + + E Sbjct: 158637 SLAMCCRHYLEYKQLKKKLRKVVEAKREETRDEQENFKHALDSEVERVVLFFLTKQGEFA 158458 Query: 200 TDLKAVEAKVQELGPDCILCIHSTTSCF 227 T L+ + A+ QEL P + +HS + Sbjct: 158457 TTLQGLRAQQQELAPGDLEAMHSIADMY 158374 >gb|AAQY01000349.1| Phytophthora sojae strain P6497 Psojae_Cont349, whole genome shotgun sequence Length = 153154 Score = 30.4 bits (67), Expect = 7.7 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +3 Query: 87 RHYRFIHGIGRSGDISAVQPKAAGSSLLNK 116 R YRFI G+ GDI+ + P AG S L + Sbjct: 108246 RRYRFITGVDWRGDIARINPVWAGLSALRR 108335 Database: genome.fa Posted date: Jan 19, 2010 5:09 PM Number of letters in database: 78,051,097 Number of sequences in database: 5578 Lambda K H 0.320 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,621,756 Number of Sequences: 5578 Number of extensions: 648619 Number of successful extensions: 3815 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 503 Number of HSP's successfully gapped in prelim test: 157 Number of HSP's that attempted gapping in prelim test: 2821 Number of HSP's gapped (non-prelim): 1891 length of query: 501 length of database: 26,017,032 effective HSP length: 111 effective length of query: 390 effective length of database: 25,397,874 effective search space: 9905170860 effective search space used: 9905170860 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 66 (30.0 bits)