T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=100
*
 BAD AVG GOOD
*
gi|29165348|gb|   : 100
Contig5077_subs   : 100
cons              : 100

gi|29165348|gb|   MGSAVGFALRKLFVYISAVLMVCAAILQMSMLKLLSFISPGRMRK
Contig5077_subs   ---------------------------------------------

cons                                                           


gi|29165348|gb|   IHMKMGERSTMTQNPKFRYEDWGPAFFSLAFIKTLFFVNWCSLGL
Contig5077_subs   ---------------------------------------------

cons                                                           


gi|29165348|gb|   EAFEGHAAPDSALITLDRQKTSVHRFLKGNRPLVLSFGSCTUPPF
Contig5077_subs   ------------------------------------------PPM

cons                                                        **:


gi|29165348|gb|   LYKLDEFKQLVKDFSNVADFLIVYLAEAHATDAWAFKNNVDISVH
Contig5077_subs   RFVVPQLHALQKEFSEKMSFVCIYIAEAHATDEW-----------

cons               : : ::: * *:**:  .*: :*:******* *           


gi|29165348|gb|   KNLEERLAAARTLLKEDPPCPVVVDEMNNITASKYGALPERLYVI
Contig5077_subs   ---------------------------------------------

cons                                                           


gi|29165348|gb|   QSGKVIYQASDLGGQA
Contig5077_subs   ----------------

cons