TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|166240590|ref|XP_643546.2| thyroxine 5'-deiodinase
[Dictyostelium discoideum AX4]
         (257 letters)

Database: I.multifiliis_strain_G5/genome.fa 
           2017 sequences; 48,799,969 total letters

Searching..................................................done

 ***** No hits found ******

  Database: I.multifiliis_strain_G5/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 48,799,969
  Number of sequences in database:  2017
  
Lambda     K      H
   0.321    0.140    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,260,105
Number of Sequences: 2017
Number of extensions: 329211
Number of successful extensions: 966
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 865
Number of HSP's gapped (non-prelim): 181
length of query: 257
length of database: 16,266,656
effective HSP length: 101
effective length of query: 156
effective length of database: 16,062,939
effective search space: 2505818484
effective search space used: 2505818484
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)