TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|166240590|ref|XP_643546.2| thyroxine 5'-deiodinase [Dictyostelium discoideum AX4] (257 letters) Database: D.fasciculatum/genome.fa 25 sequences; 31,019,208 total letters Searching.........................done Score E Sequences producing significant alignments: (bits) Value gi|328867405|gb|GL883025.1| Dictyostelium fasciculatum unplaced ... 94 4e-50 gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced ... 32 0.44 gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced ... 29 2.8 gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced ... 29 2.8 gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced ... 28 4.8 gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced ... 28 8.3 gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced ... 28 8.3 >gi|328867405|gb|GL883025.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EU5ZYIE01EUG8B-5, whole genome shotgun sequence Length = 941765 Score = 94.0 bits (232), Expect(3) = 4e-50 Identities = 47/107 (43%), Positives = 69/107 (64%), Gaps = 6/107 (5%) Frame = +1 Query: 23 ECYRNGYHPSKWELAQVLLNGIWKPYKFKSYMQYKSRERLNLQADTQCPDAILL----DD 78 +CY+NGYHPS W++ QV L GIWKP+K KS +++K+R +L+L+ C DA LL DD Sbjct: 155020 KCYQNGYHPSGWDMVQVFLAGIWKPFKIKSILEHKNRIKLDLKVGDVCKDARLLTYHQDD 155199 Query: 79 QTNQEVSLYD--LFNSNNNEKSVQDRPMVLICGSFTUPPFRDKMCMF 123 + YD L+ +N+ + +P++L CGS+T PFRDK M+ Sbjct: 155200 IATVDDQAYDTTLYQLLDNQPT---KPILLFCGSYT*MPFRDKASMY 155331 Score = 71.6 bits (174), Expect(3) = 4e-50 Identities = 28/45 (62%), Positives = 38/45 (84%) Frame = +2 Query: 123 FQDIFVDFKEWVDIYIVYLKEIHPADEWYIGGDEISLCYRQPKTM 167 F+ I+ ++K+ V YIVYLKE+HP+DEWY+GGDEISLC++QP M Sbjct: 155411 FESIYQEYKDKVQCYIVYLKEMHPSDEWYVGGDEISLCHKQPTNM 155545 Score = 71.6 bits (174), Expect(3) = 4e-50 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%) Frame = +3 Query: 170 RREIIKDLKEYAPFCTIPFLIDKMDNNFNKVYDAVPERLYVLEDKK-FKYVXXXXXXXXI 228 R +IIK+ K+Y T+P L+D MDNNF YDAVPER++V+E+ K F YV Sbjct: 155631 RFQIIKNFKDYCNDLTVPILVDLMDNNFQAGYDAVPERIFVIENNKTFSYVGGPGPFEFF 155810 Query: 229 PEELREFLTKRY 240 PE+++E+L RY Sbjct: 155811 PEQVKEYLDNRY 155846 >gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-F-a-25c12.r2-5, whole genome shotgun sequence Length = 4166812 Score = 32.0 bits (71), Expect = 0.44 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 91 NSNNNEKSVQDRPMVLICGSFTUPPFRDKMCMFQDIFVDFKEWVDIYIVYLK 142 N+NNN+ D+P++ + S F K+ D ++DF + + VY + Sbjct: 908714 NNNNNQDDGNDQPIIYVVNSLEETEFTSKLSQMIDGYLDFYQNANQESVYFR 908869 >gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-o-80e12.f1-5, whole genome shotgun sequence Length = 2750715 Score = 29.3 bits (64), Expect = 2.8 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -2 Query: 173 IIKDLKEYAPFCTIPFLIDKMDNNF 197 I+ DLK Y PF + +L+D M NN+ Sbjct: 2292278 ILLDLKNYYPFLLLNYLMDVMINNY 2292204 Score = 28.1 bits (61), Expect = 6.3 Identities = 16/58 (27%), Positives = 27/58 (46%) Frame = -2 Query: 47 PYKFKSYMQYKSRERLNLQADTQCPDAILLDDQTNQEVSLYDLFNSNNNEKSVQDRPM 104 P K S + K + ++ Q I+ D+Q QE++ + N+NN K Q P+ Sbjct: 997340 PIKCVSKLDPKKKRNISDLQQQQSQQIIIEDEQQQQEITNNNNNNNNNKNKRKQLEPI 997167 >gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-p-12c09.r1-3, whole genome shotgun sequence Length = 1770755 Score = 29.3 bits (64), Expect = 2.8 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 6/46 (13%) Frame = +1 Query: 178 KEYAPFCTIPFLIDKMDNNFNKVYDAVPERL------YVLEDKKFK 217 +++ P+ ++PF D+++N NK+Y ++ L Y L + KFK Sbjct: 1392799 RQHNPYQSLPFQCDQLNNQTNKIYVSILALLINICYIYTLFNGKFK 1392936 >gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-b-205a01.r1-3, whole genome shotgun sequence Length = 2485436 Score = 28.5 bits (62), Expect = 4.8 Identities = 12/45 (26%), Positives = 26/45 (57%) Frame = -2 Query: 57 KSRERLNLQADTQCPDAILLDDQTNQEVSLYDLFNSNNNEKSVQD 101 K+RE+L +++ IL ++ N ++ +FN+NNN ++ + Sbjct: 1583377 KTREKLEVRSRE*I*IIILFNNNNNNNHNIISIFNNNNNNNNINN 1583243 >gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EUAJFUG02HR96I-5, whole genome shotgun sequence Length = 3408800 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +3 Query: 115 PFRDKMCMFQDIFVDFKEWVDIYIVY 140 P R +M QDIF KE+VDIY+ Y Sbjct: 1865760 PSRLRMSQSQDIF---KEYVDIYVTY 1865828 >gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_ET2XIPL01CNAVH-3, whole genome shotgun sequence Length = 1908399 Score = 27.7 bits (60), Expect = 8.3 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 2 NYLFNIFEEEKPIKKAPIITEECYRNGYHPSKWELAQ 38 ++LF IF E+P K A EE R G PS W + + Sbjct: 763906 SFLFYIFVGERPTKMADQYKEELDREG--PSAWAVVE 763802 Database: D.fasciculatum/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 31,019,208 Number of sequences in database: 25 Lambda K H 0.321 0.140 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,309,377 Number of Sequences: 25 Number of extensions: 192116 Number of successful extensions: 995 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 896 Number of HSP's gapped (non-prelim): 340 length of query: 257 length of database: 10,339,736 effective HSP length: 98 effective length of query: 159 effective length of database: 10,337,286 effective search space: 1643628474 effective search space used: 1643628474 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)