TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000053_1.0 # Protein # Selenoprotein K1 (SelK1) #
Leishmania Braziliensis 
         (117 letters)

Database: L.donovani_BPK282A1/genome.fa 
           36 sequences; 32,444,998 total letters

Searching....................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig_36                                                             150   1e-37

>contig_36
          Length = 2713248

 Score =  150 bits (380), Expect = 1e-37
 Identities = 79/117 (67%), Positives = 82/117 (70%)
 Frame = -3

Query: 1       MAYIHNGRVVEKKPFTVRGFLLAFWGMLSLFARTLFTTQPMTQVVEEYQHXXXXXXXXXX 60
               MAYIHNGRVVEKKPFTVRGFLLA W  LSLFA+TLFTT+PM QVVEE+QH          
Sbjct: 2381413 MAYIHNGRVVEKKPFTVRGFLLALWTALSLFAQTLFTTEPMAQVVEEHQHPAPRAANAAA 2381234

Query: 61      XDGGILGSLRAMLNRRXXXXXXXXXXXXXXXXXXVNRRGGNVHTLPKAPISGGXASG 117
                 GGILGSLRAMLNRR                  VNRRGGNVHTLPKAPISGG ASG
Sbjct: 2381233 DGGGILGSLRAMLNRRGGGGQALGGGGNSGWAAAVNRRGGNVHTLPKAPISGGCASG 2381063


  Database: L.donovani_BPK282A1/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 32,444,998
  Number of sequences in database:  36
  
Lambda     K      H
   0.324    0.140    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,175,626
Number of Sequences: 36
Number of extensions: 26285
Number of successful extensions: 145
Number of sequences better than 1.0e-04: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142
Number of HSP's gapped (non-prelim): 14
length of query: 117
length of database: 10,814,999
effective HSP length: 86
effective length of query: 31
effective length of database: 10,811,903
effective search space: 335168993
effective search space used: 335168993
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 97 (42.0 bits)