T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=56
*
BAD AVG GOOD
*
SPP00000033_1.0 : 56
contig_36_subse : 56
cons : 56
SPP00000033_1.0 MAEASATGACGEAMAAAEGSSGPAGLTLGRSFSNYRPFEPQALGL
contig_36_subse ----SSHRSCAAAIRRVESRTTCTGKTVSRSFGRAKPWSRHHLAL
cons *: :*. *: .*. : :* *:.***.. :*:. : *.*
SPP00000033_1.0 SPSWR----------------------------------------
contig_36_subse QPAWRLLCGKIVVATEDSQRPTVVGGEGKGVGGPRCTHSRACWSL
cons .*:**
SPP00000033_1.0 ---------------------------------------------
contig_36_subse LPFLPSPEGRRFAGPPSRLCCRRLVPAARESNGTADLKKPRFDPV
cons
SPP00000033_1.0 ---------LTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPLG
contig_36_subse SLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQELSTTPGQKDVG
cons **.:: :** .**:** ** ** *: . : :*
SPP00000033_1.0 RGLVGGQEEASQEAGLPAGAGPSP----TFPAL--GIGMDSC---
contig_36_subse RTLDNAWAEGRRHGLQHCAAAPHKQQRGSVPRLHHGLLLPQCVRP
cons * * .. *. :.. ..*.* :.* * *: : .*
SPP00000033_1.0 ------------VIPLRHGGLSLVQTTDFFYPLVEDPYMMGRIAC
contig_36_subse VPAGSDRGCKRLVRPVQHGHPGLYN--------------------
cons * *::** .* :
SPP00000033_1.0 ANVLSDLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMV----
contig_36_subse -----------------------ADAARGQHRDGRATPDYDARNH
cons .. : .:.. :.**
SPP00000033_1.0 ---KGFRDAA-EEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEFI
contig_36_subse EGLCGAGAAGDDDGDRRADGHEPVAADWR--GGHGRRVRSGN---
cons * *. ::*. . * :.*. * ** . * . *
SPP00000033_1.0 MPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSRE
contig_36_subse ----GAASRALVRRGHLGADEAAGVPGCSESQ----------AVA
cons .... .** **:: *... :. :
SPP00000033_1.0 EVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQ
contig_36_subse AAALAAVRRGHCRAHLPRRDRGAVQHGHGHAASEPRRGSADAEAR
cons . ** . . * * * * :: :.***:: . ..::
SPP00000033_1.0 NLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRFGLLQGTSAETSG
contig_36_subse RTRGHRRDRLW---H-------------SGAREQL--WSSADRRR
cons . ::*:.: * :..* * :**:
SPP00000033_1.0 GLLICLPREQAARFCSEIKSS------------------------
contig_36_subse CTALALPRTGTAADVQDRRRRLEADERQVPPPRRVLGRDERRAAG
cons :.*** :* .: :
SPP00000033_1.0 -----------KYGEGHQAWIVGIVEK----GNRTAR--------
contig_36_subse GVPEHHRSRGVLRGAHGDRWRVSVVDCRACGGSRRQRRRWAARSR
cons * : * *.:*: *.* *
SPP00000033_1.0 --------------------------------IIDKPRVIEVLPR
contig_36_subse RPGDVAAVQPEGWRRTSFTFCCPWLRCRVPCVAPTRWRADGVPPT
cons : *. * *
SPP00000033_1.0 GATAAVLAPDSSNASSEPSS
contig_36_subse NSSSAVVPPT-PSAPRSPPA
cons .:::**:.* ..*. .*.: