genewise output
Score 55.72 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0   27 GEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLV-VL 
                     GEP+   + +G+V ++ NVAS  G T   Y  + +L   +     + +L 
                     GEPIEFNTFKGQVTVVVNVASECGYTDSHYRSLVKLWSSVKHTNQINIL 
scaffold_3:subs20000 ggcagtaatagcgagggaggtgtgtagactcatgattaagacaacaaac 
                     gactatactagatctttatccaggacagaaggttatgggtaacaatatt 
                     tagcatcataaattaagttagatatctttttcataagtcgatatgctaa 


SPP00000004_1.0   75 GFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGA  
                      FPC+QFGHQE    +EILN   +     G E  F ++EK +VNG  A  
                     AFPCDQFGHQEPGSGKEILN---FAVQEYGVE--FTMMEKIDVNGNSA  
scaffold_3:subs20147 gtctgctgccgcgtgagaca   tggcgtggg  taaagaaggagaag  
                     ctcgaatgaaacgcgaatta   tctaaagta  tcttaatatagagc  
                     tttctatataattttaattc   cttgaccaa  tgggagatctactc  


//
>scaffold_3:subseq(1584627,50000).pep
GEPIEFNTFKGQVTVVVNVASECGYTDSHYRSLVKLWSSVKHTNQINILAFPCDQFGHQE
PGSGKEILNFAVQEYGVEFTMMEKIDVNGNSA
//
>scaffold_3:subseq(1584627,50000).[20000:20275].sp
GGTGAACCGATCGAATTTAACACATTTAAAGGACAAGTTACTGTAGTAGTGAATGTTGCA
TCGGAATGTGGATATACCGATAGTCATTATCGTAGCTTAGTTAAATTATGGAGTAGCGTG
AAACATACAAATCAGATCAATATACTAGCTTTTCCTTGCGATCAATTTGGACATCAAGAA
CCTGGTTCTGGTAAAGAAATTCTTAACTTCGCTGTTCAGGAATACGGCGTAGAATTTACG
ATGATGGAAAAGATAGATGTCAATGGAAACAGTGCC
//
scaffold_3:subseq(1584627,50000)	GeneWise	match	20000	20275	58.71	+	.	scaffold_3:subseq(1584627,50000)-genewise-prediction-1
scaffold_3:subseq(1584627,50000)	GeneWise	cds	20000	20275	0.00	+	0	scaffold_3:subseq(1584627,50000)-genewise-prediction-1
//

genewise output
Score 19.05 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0   76 FPCNQFGHQENAKNEEI                                 
                     FPC QF     AKN  +                                 
                     FPCIQFYRSTRAKNSSV                                 
scaffold_3:sub-48453 tctacttctacgaattg                                 
                     tcgtatagccgcaacct                                 
                     tttaacttcgttatccg                                 


//
>scaffold_3:subseq(1584627,50000).pep
FPCIQFYRSTRAKNSSV
//
>scaffold_3:subseq(1584627,50000).[48453:48401].sp
TTTCCTTGTATACAATTCTATCGTTCCACGCGTGCTAAAAATTCCTCCGTG
//
scaffold_3:subseq(1584627,50000)	GeneWise	match	48453	48403	19.05	-	.	scaffold_3:subseq(1584627,50000)-genewise-prediction-1
scaffold_3:subseq(1584627,50000)	GeneWise	cds	48453	48403	0.00	-	0	scaffold_3:subseq(1584627,50000)-genewise-prediction-1
//