genewise output
Score 17.70 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0    7 AAAAAAAQSVYAFSA                                   
                     AAAAAAA ++  FSA                                   
                     AAAAAAAAALTIFSA                                   
Cf_Contig1034:s35036 gggggggggcaattg                                   
                     ccccccccctcttcc                                   
                     cccccccagcctccg                                   


//
>Cf_Contig1034:subseq(226172,48005).pep
AAAAAAAAALTIFSA
//
>Cf_Contig1034:subseq(226172,48005).[35036:35080].sp
GCCGCCGCCGCCGCCGCCGCCGCAGCGCTCACCATTTTCTCCGCG
//
Cf_Contig1034:subseq(226172,48005)	GeneWise	match	35036	35080	17.70	+	.	Cf_Contig1034:subseq(226172,48005)-genewise-prediction-1
Cf_Contig1034:subseq(226172,48005)	GeneWise	cds	35036	35080	0.00	+	0	Cf_Contig1034:subseq(226172,48005)-genewise-prediction-1
//

genewise output
Score 68.25 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0   36 RGKVLLIENVASLXGT-TVRDYTQMNELQRRLGPRGLVVLGFPCNQFGH 
                     +G V+LI NVAS     T   YT + +L ++       VL FPCN+FG+ 
                     KGSVVLICNVASKDKEYTEAGYTILTKLYQKHRHEKFAVLAFPCNEFGN 
Cf_Contig1034:-20440 agtggcataggaagagtagggtaacaactcacccgatggtgtctagtga 
                     agcttttgatcgaaaaacacgacttcataaaagaaatcttctcgaatga 
                     acgcgccccggcgcggccgcccgtaggccggcgcggtgggctgccatct 


SPP00000004_1.0   84 QENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREA 
                      E    +E+  ++  V P  G E +F ++ K EVNG  A PLF FL+   
                     GEPGNEDEVAENISCVYPRIG-EVDFPIMAKVEVNGDHASPLFTFLKSR 
Cf_Contig1034:-20293 ggcgaggggggaattgtccag gggtcaagagggaggcgtcctatcaac 
                     gacgaaaatcaatcgtacgtg atatcttcatatagaacccttcttagg 
                     tgcgcgcggggccccgccccg ggccgtgcgcgcccccgcgccccggct 


SPP00000004_1.0  133 LPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSR 
                     +                     + ++ V WNF  FL    GVP  R++  
                     IRG------------------TLGQSSVKWNFTYFLCDATGVPYARFAP 
Cf_Contig1034:-20149 acg                  acgcttgatatattttggaggctgctgc 
                     tgg                  ctgacctagatcattgaccgtcacgtcc 
                     ccc                  ggcgccgggcccccgccgatcacccctt 


SPP00000004_1.0  182 RFQTIDIEPDIEALLSQGP                               
                         +DIE  ++ LL   P                               
                     GSTLMDIEARVDELLHPAP                               
Cf_Contig1034:-20056 gtacagaggcgggccccgc                               
                     gccttatacgtaattaccc                               
                     aggagccatcgcgggcgga                               


//
>Cf_Contig1034:subseq(226172,48005).pep
KGSVVLICNVASKDKEYTEAGYTILTKLYQKHRHEKFAVLAFPCNEFGNGEPGNEDEVAE
NISCVYPRIGEVDFPIMAKVEVNGDHASPLFTFLKSRIRGTLGQSSVKWNFTYFLCDATG
VPYARFAPGSTLMDIEARVDELLHPAP
//
>Cf_Contig1034:subseq(226172,48005).[20440:19998].sp
AAAGGCTCGGTCGTGCTCATCTGCAACGTGGCGAGCAAGGACAAGGAGTACACCGAGGCC
GGCTACACGATTCTAACGAAGCTCTACCAGAAGCACCGGCACGAGAAGTTTGCGGTGTTG
GCCTTTCCGTGCAACGAATTTGGCAATGGTGAGCCCGGGAACGAGGACGAGGTGGCGGAG
AACATCTCCTGCGTGTACCCCCGCATCGGGGAGGTGGACTTCCCGATTATGGCCAAGGTC
GAGGTCAACGGCGACCACGCGTCCCCGCTCTTCACCTTCCTGAAGAGCCGTATCCGCGGC
ACGCTGGGCCAGTCCTCCGTGAAGTGGAACTTCACCTACTTCTTGTGCGACGCGACAGGT
GTCCCATACGCCCGCTTCGCTCCTGGATCGACGCTAATGGACATCGAAGCTCGCGTGGAC
GAGCTGCTGCACCCGGCGCCA
//
Cf_Contig1034:subseq(226172,48005)	GeneWise	match	20440	20000	85.22	-	.	Cf_Contig1034:subseq(226172,48005)-genewise-prediction-1
Cf_Contig1034:subseq(226172,48005)	GeneWise	cds	20440	20000	0.00	-	0	Cf_Contig1034:subseq(226172,48005)-genewise-prediction-1
//