genewise output
Score 20.24 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0  107 PNFMLFEKCEVNGAGAHPLFAFLR                          
                     P F+L+ +C+  G   H  FA L+                          
                     PFFILLSRCKTRGNAQHKSFAGLQ                          
Cf_Contig1047:s 5212 cttacctctaaagagccaatggcc                          
                     ctttttcggacggacaaagtcgta                          
                     attaggtacagacctgcactttta                          


//
>Cf_Contig1047:subseq(205305,50000).pep
PFFILLSRCKTRGNAQHKSFAGLQ
//
>Cf_Contig1047:subseq(205305,50000).[5212:5283].sp
CCATTTTTTATACTGCTGTCTCGATGCAAAACGAGAGGCAACGCTCAGCACAAAAGCTTT
GCTGGTCTTCAA
//
Cf_Contig1047:subseq(205305,50000)	GeneWise	match	5212	5283	20.24	+	.	Cf_Contig1047:subseq(205305,50000)-genewise-prediction-1
Cf_Contig1047:subseq(205305,50000)	GeneWise	cds	5212	5283	0.00	+	0	Cf_Contig1047:subseq(205305,50000)-genewise-prediction-1
//

genewise output
Score 67.73 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0    9 AAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYT 
                     A A   S++A+SA     G+ + L    G V LI NVAS    T  +   
                     AEAGMTSIFAYSA--AQEGKMILLQRYTGCVTLIVNVASRCSFTTANLE 
Cf_Contig1047:-20467 ggggaatatgtag  gcggaaacccctagtgacagaggtctataagacg 
                     cacgtccttcagc  caagattttagacggtctttatccgggtcccata 
                     aactgatctcccc  aggcggcgggcccccggacccgcggcctggaccg 


SPP00000004_1.0   58 QMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFE 
                      +NE+Q+  G R   VLGFPC+QF +QE   N EI    +  RP      
                     MLNEVQQTYGSRKFTVLGFPCSQFANQEPLSNAEIAQ-WRQERP----- 
Cf_Contig1047:-20326 acaggccatgacatagcgtcttctgacgccaaggagc tccgcc      
                     ttaataacagggatcttgtcgcatcaaactgacatca ggaagc      
                     ggcgggggccctgctgtccccggcgcgggccccgtgg gggggg      


SPP00000004_1.0  107 PNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTD          
                       F +F+K  V G  A PLF +LR    AP  + T  + D          
                     VLFPVFDKINVKGPQADPLFQMLRAQQGAPVWNYTKYLCD          
Cf_Contig1047:-20197 gctcgtgaaagagccggcctcaccgccggcgtataatctg          
                     tttcttaatatagcacacttattgcaagcctgaacaatga          
                     gctcctcaccggcaggtgccgggcggacggggccagcgtc          


//
>Cf_Contig1047:subseq(205305,50000).pep
AEAGMTSIFAYSAAQEGKMILLQRYTGCVTLIVNVASRCSFTTANLEMLNEVQQTYGSRK
FTVLGFPCSQFANQEPLSNAEIAQWRQERPVLFPVFDKINVKGPQADPLFQMLRAQQGAP
VWNYTKYLCD
//
>Cf_Contig1047:subseq(205305,50000).[20467:20076].sp
GCAGAAGCCGGTATGACATCTATCTTTGCCTACAGCGCCGCACAGGAGGGCAAGATGATC
CTGCTGCAGCGCTACACCGGCTGCGTGACGCTAATCGTCAACGTGGCCTCGCGGTGCAGC
TTTACGACGGCAAACCTCGAGATGCTGAACGAGGTGCAGCAGACGTACGGCAGCCGTAAG
TTCACTGTGCTTGGCTTCCCCTGCTCGCAGTTCGCGAACCAGGAGCCGCTCAGCAACGCC
GAGATTGCGCAGTGGCGGCAGGAGCGGCCGGTGCTCTTTCCCGTCTTTGACAAAATCAAC
GTGAAGGGCCCACAGGCGGATCCGCTCTTCCAGATGCTGCGCGCGCAGCAAGGCGCGCCG
GTGTGGAACTACACAAAGTACCTGTGTGAC
//
Cf_Contig1047:subseq(205305,50000)	GeneWise	match	20467	20078	72.72	-	.	Cf_Contig1047:subseq(205305,50000)-genewise-prediction-1
Cf_Contig1047:subseq(205305,50000)	GeneWise	cds	20467	20078	0.00	-	0	Cf_Contig1047:subseq(205305,50000)-genewise-prediction-1
//