genewise output
Score 18.38 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0  138 DDATALMTDPKLITWSP                                 
                     +DA A    P L+ WSP                                 
                     EDARASPPAPPLLPWSP                                 
Cf_Contig944:su 7187 gggcgtccgcccccttc                                 
                     aacgcccccccttcgcc                                 
                     gcttgaaaaactgcgct                                 


//
>Cf_Contig944:subseq(5853,50000).pep
EDARASPPAPPLLPWSP
//
>Cf_Contig944:subseq(5853,50000).[7187:7237].sp
GAGGACGCTCGTGCGTCACCACCAGCACCACCCCTTCTGCCCTGGTCCCCT
//
Cf_Contig944:subseq(5853,50000)	GeneWise	match	7187	7237	18.38	+	.	Cf_Contig944:subseq(5853,50000)-genewise-prediction-1
Cf_Contig944:subseq(5853,50000)	GeneWise	cds	7187	7237	0.00	+	0	Cf_Contig944:subseq(5853,50000)-genewise-prediction-1
//

genewise output
Score 68.23 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000004_1.0    9 AAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYT 
                     A A   S++A+SA     G+ + L    G V LI NVAS    T  +   
                     AEAGMTSIFAYSA--AQEGKTILLQRYTGCVTLIVNVASRCSFTTANLE 
Cf_Contig944:s-20467 ggggaatatgtag  gcggaaacccctagtgacagaggtctataagacg 
                     cacgtccttcagc  caagactttagacggtctttatccgggtcccata 
                     aactgatctcccc  aggcggcgggcccccgggcccgcggcctggaccg 


SPP00000004_1.0   58 QMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFE 
                      +NE+Q+  G R   VLGFPC+QF +QE   N EI    +  RP      
                     MLNEVQQTYGSRKFTVLGFPCSQFANQEPLSNAEIAQ-WRQERP----- 
Cf_Contig944:s-20326 acaggccatgacatagcgtcttctgacgccaaggagc tccgcc      
                     ttaataacagggatcttgtcgcatcaaactgacatca ggaagc      
                     ggcgggggccccgccgtctccggcgcgggccccgcgg gggggg      


SPP00000004_1.0  107 PNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTD          
                       F +F+K  V G  A PLF +LR    AP  + T  + D          
                     VLFPVFDKINVKGPQADPLFQMLRAQQGAPVWNYTKYLCD          
Cf_Contig944:s-20197 gctcgtgaaagagccggcctcaccgccggcgtataatctg          
                     tttcttaatatagcacacttattgcaagcctgaacaatga          
                     gctcgccaccggcaggcgccgggcggaccgggccggcgtc          


//
>Cf_Contig944:subseq(5853,50000).pep
AEAGMTSIFAYSAAQEGKTILLQRYTGCVTLIVNVASRCSFTTANLEMLNEVQQTYGSRK
FTVLGFPCSQFANQEPLSNAEIAQWRQERPVLFPVFDKINVKGPQADPLFQMLRAQQGAP
VWNYTKYLCD
//
>Cf_Contig944:subseq(5853,50000).[20467:20076].sp
GCAGAAGCCGGTATGACATCTATCTTTGCCTACAGCGCCGCACAGGAGGGCAAGACGATC
CTGCTGCAGCGCTACACCGGCTGCGTGACGCTGATCGTCAACGTGGCCTCGCGGTGCAGC
TTTACGACGGCAAACCTCGAGATGCTGAACGAGGTGCAGCAGACGTACGGCAGCCGCAAG
TTCACCGTGCTTGGCTTTCCCTGCTCGCAGTTCGCGAACCAGGAGCCGCTCAGCAACGCC
GAGATCGCGCAGTGGCGGCAGGAGCGGCCGGTGCTCTTTCCCGTGTTCGACAAAATCAAC
GTGAAGGGCCCACAGGCGGACCCGCTCTTCCAGATGCTGCGCGCGCAGCAAGGCGCCCCG
GTGTGGAACTACACGAAGTACCTGTGTGAC
//
Cf_Contig944:subseq(5853,50000)	GeneWise	match	20467	20078	73.22	-	.	Cf_Contig944:subseq(5853,50000)-genewise-prediction-1
Cf_Contig944:subseq(5853,50000)	GeneWise	cds	20467	20078	0.00	-	0	Cf_Contig944:subseq(5853,50000)-genewise-prediction-1
//