genewise output
Score 17.62 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|298566227|re    3 KFLHIRVVSDIMXPWCWVGK                              
                     KFL+  VV   + P C + K                              
                     KFLYAYVVHHTLHPICTINK                              
scaffold_3:subs20162 atctgtggccacccataaaa                              
                     attacattaactactgctaa                              
                     actctcccttcccttcactg                              


//
>scaffold_3:subseq(2381976,50000).pep
KFLYAYVVHHTLHPICTINK
//
>scaffold_3:subseq(2381976,50000).[20162:20221].sp
AAATTCCTTTACGCTTACGTCGTCCATCATACCCTCCACCCTATTTGCACAATCAATAAG
//
scaffold_3:subseq(2381976,50000)	GeneWise	match	20162	20221	17.62	+	.	scaffold_3:subseq(2381976,50000)-genewise-prediction-1
scaffold_3:subseq(2381976,50000)	GeneWise	cds	20162	20221	0.00	+	0	scaffold_3:subseq(2381976,50000)-genewise-prediction-1
//

genewise output
Score 56.74 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

gi|298566227|re   16 PWCWVGKRNLETAMKASENEYKFK-----VTWEPFLLRPNMPL-EGIAK 
                     PWC++GKR LE A+K + ++ +FK     V W PF L    P   G+ K 
                     PWCFIGKRRLELAIKMANDDPQFKDVDFNVIWRPFQLNAAAPKGKGVNK 
scaffold_3:sub-20614 ctttagacccgtgaaagaggcctagggtagatactctagggcagaggaa 
                     cggttgaggtatctatcaaacataatatattggctataccccagagtaa 
                     cgctttatataagcggattttatgtttttcagaataattttgaagagcg 


gi|298566227|re   59 Q----GDFGPHTPGAQ--RLINVGRKVGVEFAFKQPRYPYTLFGHCALE 
                            FG          +   G K G+ F++    Y    F    L  
                     MEMYLEKFGKSRMDTMLPQMKETGLKEGINFSY--GGYTGNTFDSHRLI 
scaffold_3:sub-20467 agattgatgataagaacccaagagcaggaatat  ggtagaatgacaca 
                     tatataatgacgtacttcataacgtaagtatga  ggacgactagagtt 
                     gagcgaattatggtagccggaataaaaattttt  tttcttattttaaa 


gi|298566227|re  102 FAIKKDPSGSIQTQLQESLFKSYFTDGE-YPDVETVSTVAATCG--LNR 
                     +  K+     +Q ++ ESLFK+YF + +   D+  +   A      ++  
                     WKAKEVGGIDLQDKVVESLFKAYFEEEKSMGDLSVLIDCANRVEGMMDD 
scaffold_3:sub-20326 tagaggggagtcgagggattagttgggaaaggcagcagtgaagggaagg 
                     gacaatggtataaattagttacataaaagtgatgtttagcagtagttaa 
                     ggaaaatactaatgccatatgactaaagtgctattttttatgggtggcc 


gi|298566227|re  148 EEVKSFISDESN--LAAVKRKAAQWSANGVSGVPYFIINDCPVFSGAQE 
                       VK F+ + +N     +K         GVSGVP+FI+ND   +SGAQ  
                     VSVKEFLEESNNGKNETLKELEEYRRVYGVSGVPFFIFNDKYSLSGAQP 
scaffold_3:sub-20179 gagagtcggtaagaagatagtggtccgtggtggcttatagatacaggcc 
                     tgtaattaacaagaaactaataaaggtagtcgtcttttaaaagtggcac 
                     acagattagattcgtatgggagatatgtttattactcctcattttataa 


gi|298566227|re  195 PAAFQNIFAKV                                       
                     P  + ++F K+                                       
                     PDEILSVFKKL                                       
scaffold_3:sub-20032 cggactgtaac                                       
                     caattcttaat                                       
                     gtatagacgga                                       


//
>scaffold_3:subseq(2381976,50000).pep
PWCFIGKRRLELAIKMANDDPQFKDVDFNVIWRPFQLNAAAPKGKGVNKMEMYLEKFGKS
RMDTMLPQMKETGLKEGINFSYGGYTGNTFDSHRLIWKAKEVGGIDLQDKVVESLFKAYF
EEEKSMGDLSVLIDCANRVEGMMDDVSVKEFLEESNNGKNETLKELEEYRRVYGVSGVPF
FIFNDKYSLSGAQPPDEILSVFKKL
//
>scaffold_3:subseq(2381976,50000).[20614:19998].sp
CCCTGGTGCTTTATTGGTAAACGTCGACTTGAATTAGCGATCAAGATGGCAAATGATGAT
CCTCAATTTAAGGATGTTGATTTTAATGTCATATGGAGACCATTTCAATTAAATGCTGCT
GCTCCGAAAGGAAAGGGAGTGAACAAGATGGAAATGTACTTGGAAAAATTTGGTAAATCT
AGGATGGATACAATGCTCCCCCAGATGAAAGAAACTGGACTAAAAGAAGGAATTAATTTT
AGTTATGGTGGTTATACCGGTAATACATTTGATAGTCATAGACTAATATGGAAGGCAAAA
GAAGTAGGTGGAATCGATTTACAAGATAAGGTCGTCGAAAGTTTATTTAAGGCATACTTT
GAAGAAGAAAAGAGTATGGGCGATCTAAGTGTTCTTATTGATTGTGCAAATAGGGTGGAG
GGTATGATGGACGACGTAAGCGTAAAGGAATTTCTTGAAGAGTCAAATAATGGCAAGAAT
GAAACTTTGAAGGAGTTAGAGGAATATCGACGTGTGTATGGTGTTTCAGGTGTTCCATTC
TTTATCTTCAATGACAAATATAGTCTTAGTGGAGCTCAACCACCGGATGAAATTCTATCG
GTATTCAAGAAGCTA
//
scaffold_3:subseq(2381976,50000)	GeneWise	match	20614	20000	67.72	-	.	scaffold_3:subseq(2381976,50000)-genewise-prediction-1
scaffold_3:subseq(2381976,50000)	GeneWise	cds	20614	20000	0.00	-	0	scaffold_3:subseq(2381976,50000)-genewise-prediction-1
//