TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000004_1.0 # Protein # Glutathione peroxidase 1 (GPx1) #
Homo sapiens # Complete
         (203 letters)

Database: I.multifiliis_strain_G5/genome.fa 
           2017 sequences; 48,799,969 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|340505327|gb|GL983833.1| Ichthyophthirius multifiliis unplace...    32   0.59 
gi|340501555|gb|GL984262.1| Ichthyophthirius multifiliis unplace...    30   1.7  

>gi|340505327|gb|GL983833.1| Ichthyophthirius multifiliis unplaced
            genomic scaffold scaff_1120509250869, whole genome
            shotgun sequence
          Length = 31548

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -1

Query: 159  DVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 196
            ++ WNF KFL+  +G   R Y+ +    ++ P+IE LL
Sbjct: 2364 NIPWNFGKFLINKEGKVHRFYTPKEMPNEMIPEIEKLL 2251


>gi|340501555|gb|GL984262.1| Ichthyophthirius multifiliis unplaced
             genomic scaffold scaff_1120509251301, whole genome shotgun
             sequence
          Length = 54917

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
 Frame = -3

Query: 28    EPVSLGSL-RGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQE- 85
             E + +G + + KV+++ N+ S          ++NEL++R     + +LG P N F ++  
Sbjct: 30630 EEILIGDITKNKVVIVVNLGS*NNCY*E*INKLNELKKRFA-N*VEILGIPSN*FHNEPF 30454

Query: 86    NAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLR 130
             N +  + ++  K   P         +  K E+NG   HPL+ FL+
Sbjct: 30453 NYEKTK*IHL*KC*FP---------ILGKLEING*YIHPLYKFLK 30346


  Database: I.multifiliis_strain_G5/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 48,799,969
  Number of sequences in database:  2017
  
Lambda     K      H
   0.321    0.137    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,113,337
Number of Sequences: 2017
Number of extensions: 57358
Number of successful extensions: 90
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 74
Number of HSP's gapped (non-prelim): 22
length of query: 203
length of database: 16,266,656
effective HSP length: 98
effective length of query: 105
effective length of database: 16,068,990
effective search space: 1687243950
effective search space used: 1687243950
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)