TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000004_1.0 # Protein # Glutathione peroxidase 1 (GPx1) # Homo sapiens # Complete (203 letters) Database: C.fasciculata/genome.fa 1089 sequences; 37,048,325 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value Cf_Contig944 | | 1 to 108260 79 2e-15 Cf_Contig1047 | | 1 to 300975 79 2e-15 Cf_Contig1034 | | 1 to 274177 79 3e-15 Cf_Contig755 | | 1 to 13617 79 3e-15 Cf_Contig781 | | 1 to 187108 32 0.46 Cf_Contig896 | | 1 to 63591 31 0.60 Cf_Contig885 | | 1 to 124534 30 1.0 Cf_Contig763 | | 1 to 71827 30 1.7 Cf_Contig911 | | 1 to 78501 29 2.3 Cf_Contig972 | | 1 to 178207 28 5.0 Cf_Contig900 | | 1 to 239103 28 5.0 Cf_Contig849 | | 1 to 88023 28 5.0 Cf_Contig1049 | | 1 to 302556 28 6.6 Cf_Contig1046 | | 1 to 248163 28 6.6 Cf_Contig1005 | | 1 to 178835 28 6.6 Cf_Contig973 | | 1 to 202041 28 6.6 Cf_Contig931 | | 1 to 135679 28 6.6 Cf_Contig391 | | 1 to 1037 28 6.6 Cf_Contig543 | | 1 to 18241 27 8.6 >Cf_Contig944 | | 1 to 108260 Length = 108260 Score = 79.3 bits (194), Expect = 2e-15 Identities = 64/196 (32%), Positives = 87/196 (44%), Gaps = 2/196 (1%) Frame = -2 Query: 3 AARLA--AAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMN 60 ++RLA A A S++A+SA G+ + L G V LI NVAS T + +N Sbjct: 26344 SSRLAEETAEAGMTSIFAYSAAQ--EGKTILLQRYTGCVTLIVNVASRCSFTTANLEMLN 26171 Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA 120 E+Q+ G R VLGFPC+QF +QE N EI + RP F +F+K V G Sbjct: 26170 EVQQTYGSRKFTVLGFPCSQFANQEPLSNAEIA-QWRQERP-----VLFPVFDKINVKGP 26009 Query: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 180 A PLF LR AP WN+ K+L GVP+R+ Sbjct: 26008 QADPLFQMLRAQQGAP------------------------VWNYTKYLCDRGGVPVRKLE 25901 Query: 181 RRFQTIDIEPDIEALL 196 ++ IE +L Sbjct: 25900 PGCSLDTLKRAIECVL 25853 >Cf_Contig1047 | | 1 to 300975 Length = 300975 Score = 79.0 bits (193), Expect = 2e-15 Identities = 64/196 (32%), Positives = 87/196 (44%), Gaps = 2/196 (1%) Frame = -3 Query: 3 AARLA--AAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMN 60 ++RLA A A S++A+SA G+ + L G V LI NVAS T + +N Sbjct: 225796 SSRLAEETAEAGMTSIFAYSAAQ--EGKMILLQRYTGCVTLIVNVASRCSFTTANLEMLN 225623 Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA 120 E+Q+ G R VLGFPC+QF +QE N EI + RP F +F+K V G Sbjct: 225622 EVQQTYGSRKFTVLGFPCSQFANQEPLSNAEIA-QWRQERP-----VLFPVFDKINVKGP 225461 Query: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 180 A PLF LR AP WN+ K+L GVP+R+ Sbjct: 225460 QADPLFQMLRAQQGAP------------------------VWNYTKYLCDRGGVPVRKLE 225353 Query: 181 RRFQTIDIEPDIEALL 196 ++ IE +L Sbjct: 225352 PGCSLDTLKRAIECVL 225305 >Cf_Contig1034 | | 1 to 274177 Length = 274177 Score = 78.6 bits (192), Expect = 3e-15 Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 1/166 (0%) Frame = -2 Query: 36 RGKVLLIENVASLXGT-TVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILN 94 +G V+LI NVAS T YT + +L ++ VL FPCN+FG+ E +E+ Sbjct: 246612 KGSVVLICNVASKDKEYTEAGYTILTKLYQKHRHEKFAVLAFPCNEFGNGEPGNEDEVAE 246433 Query: 95 SLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSP 154 ++ V P G E +F + K EVNG A PLF FL+ + Sbjct: 246432 NISCVYPRIG-EVDFPIMAKVEVNGDHASPLFTFLKSRIRGT------------------ 246310 Query: 155 VCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGP 200 + ++ V WNF FL GVP R++ +DIE ++ LL P Sbjct: 246309 LGQSSVKWNFTYFLCDATGVPYARFAPGSTLMDIEARVDELLHPAP 246172 Score = 75.1 bits (183), Expect = 4e-14 Identities = 61/189 (32%), Positives = 79/189 (41%), Gaps = 2/189 (1%) Frame = -3 Query: 3 AARLAAAAAAAQSVYAFSARPLAGGE--PVSLGSLRGKVLLIENVASLXGTTVRDYTQMN 60 A A AAAA S+Y F GG+ P L +G LLI NVAS G T Y Sbjct: 248582 AILFGAGAAAAASIYDFKVN---GGDHQPYDLTQHKGHPLLIYNVASQCGYTKGGYEAAA 248412 Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA 120 L + RG VL FPCNQF QE E+ R F+ +F + EK +VNG Sbjct: 248411 ALYNKYKDRGFTVLAFPCNQFNGQEPGTEAEV-KEFACTR----FKADFPIMEKVDVNGD 248247 Query: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 180 PL+ +L+ A V WNF FLV +G + R++ Sbjct: 248246 KEIPLYHYLKHAQKGLLGSTA------------------VKWNFTAFLVDKEGHAVHRFA 248121 Query: 181 RRFQTIDIE 189 + +IE Sbjct: 248120 PGAKAEEIE 248094 Score = 68.6 bits (166), Expect = 3e-12 Identities = 58/184 (31%), Positives = 78/184 (42%), Gaps = 2/184 (1%) Frame = -2 Query: 15 SVYAFSARPLAGGE--PVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLV 72 S+Y F GG+ P L +G LLI NVAS G T Y L + RG Sbjct: 253782 SIYDFQVN---GGDHQPYDLTQHKGHPLLIYNVASQCGYTKGGYETAAALYNKYKDRGFT 253612 Query: 73 VLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREA 132 VL FPCNQF QE E+ R F+ +F + EK +VNG PL+ +L+ A Sbjct: 253611 VLAFPCNQFNGQEPGTEAEV-KEFACTR----FKADFPIMEKVDVNGDKEIPLYHYLKHA 253447 Query: 133 LPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDI 192 K + S V WNF FLV +G + R+S +I+ + Sbjct: 253446 --------------QKGLLGS----TSVKWNFTAFLVDKEGHAVHRFSPGATAEEIDEKL 253321 Query: 193 EALL 196 L+ Sbjct: 253320 APLM 253309 Score = 68.6 bits (166), Expect = 3e-12 Identities = 58/177 (32%), Positives = 76/177 (42%), Gaps = 2/177 (1%) Frame = -3 Query: 15 SVYAFSARPLAGGE--PVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLV 72 S+Y F GG+ P L +G LLI NVAS G T Y L + RG Sbjct: 250721 SIYDFQVN---GGDHQPYDLTQHKGHPLLIYNVASKCGYTKGGYEAAAALYNKYKDRGFT 250551 Query: 73 VLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREA 132 VL FPCNQF QE E+ R F+ +F + EK +VNG PL+ +L+ A Sbjct: 250550 VLAFPCNQFMSQEPGTEAEV-KEFACTR----FKADFPIMEKVDVNGNKESPLYHYLKHA 250386 Query: 133 LPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIE 189 K I S V WNF FLV +G + R++ + +IE Sbjct: 250385 --------------QKGILGS----TSVKWNFTAFLVDKEGHAVHRFAPGAKAEEIE 250269 Score = 67.8 bits (164), Expect = 6e-12 Identities = 58/184 (31%), Positives = 78/184 (42%), Gaps = 2/184 (1%) Frame = -3 Query: 15 SVYAFSARPLAGGE--PVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLV 72 S+Y F GG+ P L +G LLI NVAS G T Y L + RG Sbjct: 252266 SIYDFQVN---GGDHQPYDLTQHKGHPLLIYNVASKCGYTKGGYEAAAALYNKYKDRGFT 252096 Query: 73 VLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREA 132 VL FPCNQF QE E+ R F+ +F + EK +VNG PL+ +L+ A Sbjct: 252095 VLAFPCNQFMSQEPGTEAEV-KEFACTR----FKADFPIMEKVDVNGDKEIPLYHYLKHA 251931 Query: 133 LPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDI 192 K + S V WNF FLV +G + R+S +I+ + Sbjct: 251930 --------------QKGLLGS----TSVKWNFTAFLVDKEGHAVHRFSPGATAEEIDEKL 251805 Query: 193 EALL 196 L+ Sbjct: 251804 APLM 251793 >Cf_Contig755 | | 1 to 13617 Length = 13617 Score = 78.6 bits (192), Expect = 3e-15 Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 1/166 (0%) Frame = -1 Query: 36 RGKVLLIENVASLXGT-TVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILN 94 +G V+LI NVAS T YT + +L ++ VL FPCN+FG+ E +E+ Sbjct: 11196 KGSVVLICNVASKDKEYTEAGYTILTKLYQKHRHEKFAVLAFPCNEFGNGEPGNEDEVAE 11017 Query: 95 SLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSP 154 ++ V P G E +F + K EVNG A PLF FL+ + Sbjct: 11016 NISCVYPRIG-EVDFPIMAKVEVNGDHASPLFTFLKSRIRGT------------------ 10894 Query: 155 VCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQGP 200 + ++ V WNF FL GVP R++ +DIE ++ LL P Sbjct: 10893 LGQSSVKWNFTYFLCDATGVPYARFAPGSTLMDIEARVDELLHPAP 10756 Score = 68.6 bits (166), Expect = 3e-12 Identities = 58/177 (32%), Positives = 76/177 (42%), Gaps = 2/177 (1%) Frame = -3 Query: 15 SVYAFSARPLAGGE--PVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLV 72 S+Y F GG+ P L +G LLI NVAS G T Y L + RG Sbjct: 13102 SIYDFQVN---GGDHQPYDLTQHKGHPLLIYNVASQCGYTKGGYEAAAALYNKYKDRGFT 12932 Query: 73 VLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREA 132 VL FPCNQF QE E+ R F+ +F + EK +VNG PL+ +L+ A Sbjct: 12931 VLAFPCNQFNGQEPGTEAEV-KEFACTR----FKADFPIMEKVDVNGDKEIPLYHYLKHA 12767 Query: 133 LPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIE 189 K I S V WNF FLV +G + R++ + +IE Sbjct: 12766 --------------QKGILGS----TSVKWNFTAFLVDKEGHAVHRFAPGAKAEEIE 12650 >Cf_Contig781 | | 1 to 187108 Length = 187108 Score = 31.6 bits (70), Expect = 0.46 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +3 Query: 7 AAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRD 55 AAAAAAA+ ++ A G P +L +L + IE + + GT +RD Sbjct: 167856 AAAAAAARPLFCGKAVTKRVGAPCTLSTLPPRPFAIERFSGVRGTRMRD 168002 >Cf_Contig896 | | 1 to 63591 Length = 63591 Score = 31.2 bits (69), Expect = 0.60 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = +1 Query: 6 LAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTV 53 +AAAAAAA + A S PL+ G V+ + GK+L + A++ +T+ Sbjct: 59998 IAAAAAAAATASAPSQLPLSAGVVVAGAAAEGKILCGRSCAAVNASTL 60141 >Cf_Contig885 | | 1 to 124534 Length = 124534 Score = 30.4 bits (67), Expect = 1.0 Identities = 20/49 (40%), Positives = 30/49 (61%) Frame = +2 Query: 5 RLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTV 53 R A+AAAA SV + S R ++ P +LGS+RG+ L +A+ TT+ Sbjct: 90389 RTHASAAAAPSVLSAS-RQMSVAPPHALGSVRGRRALSVALAAALNTTI 90532 >Cf_Contig763 | | 1 to 71827 Length = 71827 Score = 29.6 bits (65), Expect = 1.7 Identities = 17/34 (50%), Positives = 19/34 (55%) Frame = +3 Query: 1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGS 34 M A AAAAAAA A ++R L GG PV S Sbjct: 25560 MTRAVSAAAAAAAACTVAAASRSLGGGRPVRFAS 25661 >Cf_Contig911 | | 1 to 78501 Length = 78501 Score = 29.3 bits (64), Expect = 2.3 Identities = 26/73 (35%), Positives = 30/73 (41%) Frame = -3 Query: 2 CAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNE 61 CAAR +A+AA S++ P GG P L R E VA Sbjct: 61633 CAARGVSASAARPSLHGSLRHPHHGGSPARLRPSRP-----ERVAGAG------------ 61505 Query: 62 LQRRLGPRGLVVL 74 QRRL PRGL L Sbjct: 61504 -QRRLLPRGLPAL 61469 >Cf_Contig972 | | 1 to 178207 Length = 178207 Score = 28.1 bits (61), Expect = 5.0 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 136 PSDDATALMTDPKLITWSPVC 156 P+ ATAL T P + WSP C Sbjct: 159591 PTCAATALSTTPSSVRWSPTC 159653 >Cf_Contig900 | | 1 to 239103 Length = 239103 Score = 28.1 bits (61), Expect = 5.0 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = -2 Query: 2 CAARLAAAAAAAQSVYAFSARPLAGG 27 C+AR A AAAAQ V AR L GG Sbjct: 52514 CSARRDACAAAAQRVAGGRARSLCGG 52437 >Cf_Contig849 | | 1 to 88023 Length = 88023 Score = 28.1 bits (61), Expect = 5.0 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +3 Query: 102 GGGFEPNFMLFEKCEVNGAGAHP 124 GGG P+ LF C V G GAHP Sbjct: 66777 GGGQSPDRRLFRSCRVRG-GAHP 66842 >Cf_Contig1049 | | 1 to 302556 Length = 302556 Score = 27.7 bits (60), Expect = 6.6 Identities = 25/73 (34%), Positives = 29/73 (39%) Frame = +3 Query: 2 CAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNE 61 CAAR +A AA S++ P GG P L R + VA Sbjct: 274827 CAARGVSAGAARPSLHGSLRHPHHGGSPARLRPSRP-----QRVAGAG------------ 274955 Query: 62 LQRRLGPRGLVVL 74 QRRL PRGL L Sbjct: 274956 -QRRLLPRGLPAL 274991 >Cf_Contig1046 | | 1 to 248163 Length = 248163 Score = 27.7 bits (60), Expect = 6.6 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -1 Query: 4 ARLAAAAAAAQSVYAFSARPLAGGEP 29 ARL+AAAAAA +V PL G P Sbjct: 46383 ARLSAAAAAAAAVAVLCPSPLLAGRP 46306 >Cf_Contig1005 | | 1 to 178835 Length = 178835 Score = 27.7 bits (60), Expect = 6.6 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +3 Query: 11 AAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGP 68 AA + +AFS P P+S G+L LL E V T++ + E RR P Sbjct: 42051 AADDASHAFSGSPAMASPPISRGALNYDTLLDEVVGK--STSMPTFNAEEEALRRKRP 42218 >Cf_Contig973 | | 1 to 202041 Length = 202041 Score = 27.7 bits (60), Expect = 6.6 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +3 Query: 3 AARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTV 53 A R AAAAAA + A S PL+ G V+ + GK + + A++ +T+ Sbjct: 36099 ATRTIAAAAAAATASAPSQLPLSAGIVVAGAAAEGKRVCGSSCAAVNASTL 36251 >Cf_Contig931 | | 1 to 135679 Length = 135679 Score = 27.7 bits (60), Expect = 6.6 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -3 Query: 102 GGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDA 140 GGG + +LF+ A HP+ + LR P P D+A Sbjct: 2432 GGGAALDTILFDAQASTAAWQHPVASGLRTQAPTPYDEA 2316 >Cf_Contig391 | | 1 to 1037 Length = 1037 Score = 27.7 bits (60), Expect = 6.6 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +3 Query: 3 AARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIEN 44 AA AAAAAAA + A +A L GG P G G L++ + Sbjct: 471 AAAAAAAAAAAAAAAAAAAGGLHGGGPRGPGPGVGHALVVHD 596 >Cf_Contig543 | | 1 to 18241 Length = 18241 Score = 27.3 bits (59), Expect = 8.6 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = -3 Query: 7 AAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTT 52 AAAAAAA + A+ A+PL G +L + G+ + V L G+T Sbjct: 14366 AAAAAAAALLVAWFAKPLPGRVITTLRDITGR---LRCVCGLLGST 14238 Database: C.fasciculata/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 37,048,325 Number of sequences in database: 1089 Lambda K H 0.321 0.137 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,239,892 Number of Sequences: 1089 Number of extensions: 222337 Number of successful extensions: 1576 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 200 Number of HSP's successfully gapped in prelim test: 40 Number of HSP's that attempted gapping in prelim test: 1102 Number of HSP's gapped (non-prelim): 816 length of query: 203 length of database: 12,349,441 effective HSP length: 96 effective length of query: 107 effective length of database: 12,244,897 effective search space: 1310203979 effective search space used: 1310203979 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)