T-COFFEE, Version_8.99(Fri Feb 18 08:27:45 CET 2011 - Revision 596)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=93
*
 BAD AVG GOOD
*
Lt_contig2959_s   :  96
SPP00000085_1.0   :  92
cons              :  93

Lt_contig2959_s   -------------VNIGLLGHVDSGKTALAKAL
SPP00000085_1.0   MTSPPSTSSSVGPLNLGILGHVDSGKTTLTRRI

cons                           :*:*:*********:*:: :


Lt_contig2959_s   SSTASTAAFDKSPQSQ----SRGITLDLGFSAS
SPP00000085_1.0   AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTM

cons              :. .**:***  . *      *  *******: 


Lt_contig2959_s   ADLTKLQCTLVDCPGHASLIRTVVGGAQIIDVI
SPP00000085_1.0   TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMA

cons              :.*:  : :*:*****:.***:*:..: ::*: 


Lt_contig2959_s   VLVIDATKGMQVQTGECLVLGEVL-AKPLVVVL
SPP00000085_1.0   IVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVL

cons              :::**.. *:* **.* *:*.. : .: :::**


Lt_contig2959_s   NKVDQV---------------------------
SPP00000085_1.0   NKCDLAEKSKISESAKKVRKGLKSMGVDENSPI

cons              ** * .                           


Lt_contig2959_s   ---------LRAVDLAALKAAKES-----EFER
SPP00000085_1.0   VEMSLADGYFKEEMLQNLKLAIESRIFEPKRDE

cons                       ::   *  ** * **     : :.


Lt_contig2959_s   PAQFYMLVDHCFPVRGQGTVFTGTVVAGVVRVG
SPP00000085_1.0   EGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLN

cons               .:* : :****.::*****:****: **:*:.


Lt_contig2959_s   DTVLVPEMQTTRKVKGLQMFHKPVESAKSGDRV
SPP00000085_1.0   TEIEFPALNEKRRVKTLETWKQRVGQVAAGARA

cons                : .* :: .*:** *: ::: * .. :* *.


Lt_contig2959_s   GLCV-----------------------------
SPP00000085_1.0   AFLVAPSFDEHRFSRCICGPLGTLKSTKFVLAT

cons              .: *                             


Lt_contig2959_s   ---------------------------------
SPP00000085_1.0   VEPIQFFRKSINSKSKIHVAVAFETVMAECQFL

cons                                               


Lt_contig2959_s   ---------------------------------
SPP00000085_1.0   KEKENGEFEMLPSLLAPCQVLFSFEKSIFLPEN

cons                                               


Lt_contig2959_s   ---------------------------------
SPP00000085_1.0   YSNPFMAARLEQQPGSGCRFAFSGIFSQILPEN

cons                                               


Lt_contig2959_s   ---------------------------------
SPP00000085_1.0   GKNLPPRFTRKCRKGHVERVEKDGFSAICTGMF

cons                                               


Lt_contig2959_s   ---------------------------------
SPP00000085_1.0   KAETNFDVFRGFQICTSSGPRGKIEGAFGKSGK

cons                                               


Lt_contig2959_s   ---------------------------------
SPP00000085_1.0   FRVTFAEKIDGILTEKEEISLFLKKYHNENRLV

cons                                               


Lt_contig2959_s   ----A
SPP00000085_1.0   SYVPD

cons