T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=89
*
 BAD AVG GOOD
*
PHYCAscaffold_2   :  89
EhSep2_emiliani   :  89
cons              :  89

PHYCAscaffold_2   ---------------------LTSKNFDDFMAKY-ELVLVNFYAP
EhSep2_emiliani   MALRSLTLLCAAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAP

cons                                   **..***::: *  : .:::* **


PHYCAscaffold_2   WCPFCHQLHPEWERAAAQLPDHPEYSEMVRMASVDCTDPDAVWLC
EhSep2_emiliani   WXGHCKKMKPDWDSLASTFED----SKKVLIADVDCTTG-GKPLC

cons              *  .*::::*:*:  *: : *    *: * :*.****   .  **


PHYCAscaffold_2   RRAHIRAFPS-----------------------------------
EhSep2_emiliani   EKYGVRGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGPGC

cons              .:  :*.:*:                                   


PHYCAscaffold_2   ---------------------------------------------
EhSep2_emiliani   SVDLMDNCSEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTH

cons                                                           


PHYCAscaffold_2   ---------------------------------------------
EhSep2_emiliani   EALLKELQATYKESMDKLEKLKEESAPKIKLLKAATPAPKAEGAK

cons                                                           


PHYCAscaffold_2   --M
EhSep2_emiliani   DEV

cons                :