T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=89
*
 BAD AVG GOOD
*
EhSep2_emiliani   :  89
PHYCAscaffold_8   :  89
cons              :  89

EhSep2_emiliani   MALRSLTLLCAAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAP
PHYCAscaffold_8   --------------------------------------LVEFYAP

cons                                                    :::* **


EhSep2_emiliani   WXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGV
PHYCAscaffold_8   WCGHCKKLAPIYEKVADDLKG--EVNVAKVDVTAN-AELGKRFGI

cons              * *****: * ::.:*. ::.  :* :*.** *:.   * :::*:


EhSep2_emiliani   RGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGPGCSVDLM
PHYCAscaffold_8   RGFPTVLHFS-----------------------------------

cons              **:**: :*.                                   


EhSep2_emiliani   DNCSEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHEALLK
PHYCAscaffold_8   ---------------------------------------------

cons                                                           


EhSep2_emiliani   ELQATYKESMDKLEKLKEESAPKIKLLKAATPAPKAEGAKDEV
PHYCAscaffold_8   -------------------------------------------

cons