T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=92
*
 BAD AVG GOOD
*
EhSep2_emiliani   :  92
Lt_contig5552_s   :  92
cons              :  92

EhSep2_emiliani   MALRSLTLLCAAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAP
Lt_contig5552_s   -------------------------------------VMLLFYAP

cons                                                   .:: * **


EhSep2_emiliani   WXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGV
Lt_contig5552_s   WCGHCKKLHPEYEKVAKNLE-SENVIIAQLDATTNDF-DRKKFEV

cons              * *****::*:::.:*..:* *::*:**::*.**..    :*: *


EhSep2_emiliani   RGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGPGCSVDLM
Lt_contig5552_s   SGFPTM-YFIPAGESPMVYDGGRTAEDIEA---------------

cons               *:**: ** *..*.   *.***: ::::                


EhSep2_emiliani   DNCSEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHEALLK
Lt_contig5552_s   ---------------------------------------------

cons                                                           


EhSep2_emiliani   ELQATYKESMDKLEKLKEESAPKIKLLKAATPAPKAEGAKDEV
Lt_contig5552_s   ------------------------------------------F

cons                                                        .