T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=94
*
 BAD AVG GOOD
*
EhSep2_emiliani   :  94
contig_36_subse   :  94
cons              :  94

EhSep2_emiliani   MALRSLTLLCAAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAP
contig_36_subse   ----SLCVFCALRSSSAEVQVATKDNFDKIYTDGTQNVMLLFYAP

cons                  ** ::**  .:** .   * ****::  .. : .:: * **


EhSep2_emiliani   WXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGV
contig_36_subse   WCGHCQKLHPVYEKVAKSLE-SENVIIAKMDATTNDF-DREKFEV

cons              * ***:*::* ::.:*.::* *::*:**.:*.**..    **: *


EhSep2_emiliani   RGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGPGCSVDLM
contig_36_subse   SGFPTI-YFIPAGKPPIVYEGGRTADDIKAFVKS-----------

cons               *:*** ** *..:    *:***: *::* *.:.           


EhSep2_emiliani   DNCSEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHEALLK
contig_36_subse   ---------------------------------------------

cons                                                           


EhSep2_emiliani   ELQATYKESMDKLEKLKEESAPKIKLLKAATPAPKAEGAKDEV
contig_36_subse   -----------------------------------------HL

cons                                                       .: