T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=93
*
 BAD AVG GOOD
*
EhSep2_emiliani   :  93
scaffold_2_subs   :  93
cons              :  93

EhSep2_emiliani   MALRSLTLLCAAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAP
scaffold_2_subs   --------------------------------------FLKFYAP

cons                                                    *:** **


EhSep2_emiliani   WXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGV
scaffold_2_subs   WCGHCKKMAPVLEAIAPTLK--GKMAIGKIDCTK-HKAVCKEQKV

cons              * ****** *  :::*.*::   *: *..:***.  *.:*::  *


EhSep2_emiliani   RGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGPGCSVDLM
scaffold_2_subs   KGFPTLKYS--IDGEVFDYSGGRDEKSLVAFAEKMSS--------

cons              :*:**:**    * *  **.***. ..*  ***:  .        


EhSep2_emiliani   DNCSEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHEALLK
scaffold_2_subs   ---------------------------------------------

cons                                                           


EhSep2_emiliani   ELQATYKESMDKLEKLKEESAPKIKLLKAATPAPKAEGAKDEV
scaffold_2_subs   ------------------------------------------P

cons