T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=85
*
 BAD AVG GOOD
*
EhSep2_emiliani   :  85
scaffold_28_sub   :  85
cons              :  85

EhSep2_emiliani   MALRSLTLLCAAAGASAGAIELTPDNFDELVLKSGKAAFIKFLAP
scaffold_28_sub   --------------------RLNYDNYDELT--ESKTVFLKFFAP

cons                                  .*. **:***.  ..*:.*:**:**


EhSep2_emiliani   WXGHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEKYGV
scaffold_28_sub   WCGHCKRMAKDWERLAGQWEDSKIGLVAEVDCTGGGKRLCDYFGI

cons              * ****:*  **: **. :****  *:*:**** *** **: :*:


EhSep2_emiliani   RGYPTIKYFNPPDEEGEDYKGGRSLDELKKFAENELGPGCSVDLM
scaffold_28_sub   ESFPTMKYGDPNDL--QDYNGKRSLQEMSEFAEEHLVPICSPTNL

cons              ..:**:** :* *   :**:* ***:*:.:***:.* * **   :


EhSep2_emiliani   DNCSEEQKGKLKEYIDMAPEKRTEMLETLKKELADAESTHEALLK
scaffold_28_sub   KLCDDEALAKMKQYLDLSINEL-----------HQFKALEEEKLK

cons              . *.:*  .*:*:*:*:: ::             : :: .*  **


EhSep2_emiliani   ELQATYKESMDKLEKLKEESAPKIKLLKAATPAPKAEGAKDEV
scaffold_28_sub   KAEVDFETTVDRLTKEY-------------------------E

cons              : :. :: ::*:* *