T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=88
*
 BAD AVG GOOD
*
scaffold_30_sub   :  88
eEFsec.Celegans   :  88
cons              :  88

scaffold_30_sub   -TSPPNPE-EVININVGILGHVDSGKTSLVKTLSTLLSTASLDKS
eEFsec.Celegans   MTSPPSTSSSVGPLNLGILGHVDSGKTTLTRRIAELGSTSAFDAH

cons               ****... .*  :*:***********:*.: :: * **:::*  


scaffold_30_sub   KQSRQRDNTNNNNNVVSKSKSNKLKYLQMTLVDCPGHASLIRTII
eEFsec.Celegans   ATSTTTDGIRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVL

cons                *   *. ..*.  :. *. ..*.  :::*:*****:.***:::


scaffold_30_sub   GGAQIIDIVLLVVDAYKGWQAQTTECLVLAE-LTSSTLIIALNKI
eEFsec.Celegans   AASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKC

cons              ..: ::*:.::::*.  * *.**:* *:**. : .. :**.*** 


scaffold_30_sub   DMFPIAEREQRLQEATQKVRERLKQSTKFNDPSQVPIIGVSACMG
eEFsec.Celegans   DL---AEK-SKISESAKKVRKGLKSM-GVDE--NSPIVEMSLADG

cons              *:   **: .::.*:::***: **.   .::  : **: :* . *


scaffold_30_sub   GEKA--PSSSTSSTITKGSSTNSNSNSNFYFAIDHCFPIKGMGTV
eEFsec.Celegans   YFKEEMLQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTV

cons                   .. . :  : ..:.:.:* :******.*** ***


scaffold_30_sub   LTGTCLNGSINVNDIIEFPSLGNLQRKVKSIQMFKRRCLKIQQGD
eEFsec.Celegans   LTGTVIRGVLRLNTEIEFPAL-NEKRRVKTLETWKQRVGQVAAGA

cons              **** :.* :.:*  ****:* * :*:**::: :*:*  ::  * 


scaffold_30_sub   RAGICVS-NFDSTSLERGVCSTPGSVKYVKGGIALVRKIIPHYKG
eEFsec.Celegans   RAAFLVAPSFDEHRFSRCICGPLGTLKSTKFVLATVEPIQFFRK-

cons              **.: *: .**.  :.* :*.. *::* .*  :* *. *  . * 


scaffold_30_sub   PYLKNKSKYHVSVGHSTVMATVSFWGAK-----------------
eEFsec.Celegans   -SINSKSKIHVAVAFETVMAECQFLKEKENGEFEMLPSLLAPCQV

cons                ::.*** **:*...****  .*   *                 


scaffold_30_sub   ---------------------------------------------
eEFsec.Celegans   LFSFEKSIFLPENYSNPFMAARLEQQPGSGCRFAFSGIFSQILPE

cons                                                           


scaffold_30_sub   ---------------------------------------------
eEFsec.Celegans   NGKNLPPRFTRKCRKGHVERVEKDGFSAICTGMFKAETNFDVFRG

cons                                                           


scaffold_30_sub   ---------------------------------------------
eEFsec.Celegans   FQICTSSGPRGKIEGAFGKSGKFRVTFAEKIDGILTEKEEISLFL

cons                                                           


scaffold_30_sub   --------------E
eEFsec.Celegans   KKYHNENRLVSYVPD

cons                            :