TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|67191194|ref|NP_001019905.1| selenoprotein S [Gallus gallus] (194 letters) Database: P.capsici/genome.fa 917 sequences; 64,023,748 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PHYCAscaffold_29 35 0.083 PHYCAscaffold_51 33 0.24 PHYCAscaffold_34 33 0.24 PHYCAscaffold_79 32 0.54 PHYCAscaffold_35 32 0.54 PHYCAscaffold_70 31 0.92 PHYCAscaffold_5 31 0.92 PHYCAscaffold_48 31 1.2 PHYCAscaffold_569 30 1.6 PHYCAscaffold_87 30 1.6 PHYCAscaffold_40 30 1.6 PHYCAscaffold_23 30 1.6 PHYCAscaffold_20 30 1.6 PHYCAscaffold_10 30 1.6 PHYCAscaffold_15 30 2.0 PHYCAscaffold_3 30 2.0 PHYCAscaffold_46 30 2.7 PHYCAscaffold_22 30 2.7 PHYCAscaffold_71 29 4.6 PHYCAscaffold_52 29 4.6 PHYCAscaffold_50 29 4.6 PHYCAscaffold_31 29 4.6 PHYCAscaffold_17 29 4.6 PHYCAscaffold_2 29 4.6 PHYCAscaffold_1 28 5.9 PHYCAscaffold_93 28 7.8 PHYCAscaffold_27 28 7.8 PHYCAscaffold_18 28 7.8 PHYCAscaffold_7 28 7.8 >PHYCAscaffold_29 Length = 707326 Score = 34.7 bits (78), Expect = 0.083 Identities = 29/109 (26%), Positives = 46/109 (42%) Frame = -3 Query: 15 KPALEREGLELLQHTVGALLSSYGWYILLACVAIYLIVQKISPYLRMRPSSQQGATGAAV 74 K A E+EG E Q G I +A + + +K S + +Q G + Sbjct: 219458 KIASEKEGAETQQRPTKLQRGEKGEKITMALGGMRDVKKKDSGVKAVNVFDKQ-KNGEEI 219282 Query: 75 EPDMVVRRQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMW 123 E ++ R + + + +R KEK RQLEE+ +RQ+ E W Sbjct: 219281 E------HEDKRSGKRYAVDAIMEEEEQRRKEKSRQLEEESKRQRKENW 219153 >PHYCAscaffold_51 Length = 529628 Score = 33.1 bits (74), Expect = 0.24 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +2 Query: 139 SQQEAESGASTSSAVPKSKPNK-KPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG 192 +++E GA+ S ++P + P + +PL GGG GE GG R +GG Sbjct: 38654 AEEEPSLGATQSGSMPPALPGEIRPLGGGGAAASGGEAGGDAGEAERRAWRGSGG 38818 Score = 30.0 bits (66), Expect = 2.0 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +2 Query: 138 LSQQEAESGASTSSAVPKSKPNK-KPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG 192 ++++ GA+ S ++P + P + +P GGG GE GG R +GG Sbjct: 74795 MAEERPSLGATQSGSMPPALPGEIRPQDGGGVAASGGEAGGDAGEAERRAWRGSGG 74962 Score = 29.6 bits (65), Expect = 2.7 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +3 Query: 138 LSQQEAESGASTSSAVPKSKPNK-KPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG 192 ++++ GA+ S ++P + P + +P GGG GE GG R +GG Sbjct: 52884 MAEERPSLGATQSGSMPPALPGEIRPQDGGGAAASGGEAGGDAGEAERRAWRGSGG 53051 Score = 29.6 bits (65), Expect = 2.7 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +1 Query: 138 LSQQEAESGASTSSAVPKSKPNK-KPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG 192 ++++ GA+ S ++P + P + +P GGG GE GG R +GG Sbjct: 59878 MAEERPSLGATQSGSMPPALPGEIRPQDGGGAAASGGEAGGDAGEAERRAWRGSGG 60045 Score = 28.9 bits (63), Expect = 4.6 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = +3 Query: 119 KIEMWESMQEGKSYKGNLKLSQQEAESGASTSSAVPKSKPNK-KPLRGGGYNPLSGEGGG 177 K W ++ +G++ +G GA+ S ++P + P + +PL GG GE GG Sbjct: 45693 KRRAWAAVGDGEAEEG--------PSLGATQSGSMPPALPGEIRPLGEGGAAASGGEAGG 45848 Query: 178 TCSWRPGRRGPSAGG 192 R +GG Sbjct: 45849 DAGEAERRAWRGSGG 45893 >PHYCAscaffold_34 Length = 622686 Score = 33.1 bits (74), Expect = 0.24 Identities = 22/84 (26%), Positives = 42/84 (50%) Frame = +2 Query: 81 RRQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQEGKSYKGNLKLSQ 140 R+QE A +L+ +E+ + +R KEK++Q E+QKR Q+ + + Q K + Q Sbjct: 392480 RKQEQERADQLK-KEQQQKELQRQKEKRQQEEQQKRLQEKKQQQEQQRLLQEKRLQEKKQ 392656 Query: 141 QEAESGASTSSAVPKSKPNKKPLR 164 Q+ + + + K ++ R Sbjct: 392657 QQEQQRLLQEKRLQEEKQQQEQQR 392728 Score = 31.2 bits (69), Expect = 0.92 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%) Frame = +1 Query: 71 GAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKEKQRQLEEQ--KRRQKIEMWESMQE 128 GA +E + V EA LASRL Q A A R +E ++L E+ KRRQ+ E +++QE Sbjct: 56314 GARLEAERVRAEYEAALASRL--QRSAAADALRREEMAKRLAERKLKRRQQREQ-QALQE 56484 Score = 29.6 bits (65), Expect = 2.7 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 11/74 (14%) Frame = +1 Query: 81 RRQEALLASRLRMQEE---------LNAQAERYKEK--QRQLEEQKRRQKIEMWESMQEG 129 R+QE LL RLR + + A+AE +E +++LEE+ Q+ E W +++E Sbjct: 55699 RKQEQLLRERLRQRRAARRDGAGSMVKAEAEEAEEADMKQKLEEKLCAQEDEAWAALRER 55878 Query: 130 KSYKGNLKLSQQEA 143 + + + L+ EA Sbjct: 55879 EQQELDAVLAPLEA 55920 >PHYCAscaffold_79 Length = 222129 Score = 32.0 bits (71), Expect = 0.54 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Frame = +3 Query: 83 QEALLASRLRMQEELNAQAE---RYKEKQRQLEEQKRRQKIEMWESMQEGKSYKGNLKLS 139 ++A L + Q E Q E + ++ QRQ E+++ + +E WE +E + K +L+ S Sbjct: 142680 EKATLLRFIHEQAEEKFQLEARLKDQQAQRQQEKERSQHALERWE--EEKQQLKMSLQNS 142853 Query: 140 QQEAES 145 QQE E+ Sbjct: 142854 QQETEA 142871 >PHYCAscaffold_35 Length = 603175 Score = 32.0 bits (71), Expect = 0.54 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Frame = +3 Query: 151 SAVPKSKPNKKPL------RGGGYNPLSGEGGGTCSWRPGRRG 187 +AVP KP+ +P R GG S GGG C W+ + G Sbjct: 527004 AAVPVLKPHPRPADHGCPPREGGQGETSAAGGGYCEWQSAQDG 527132 >PHYCAscaffold_70 Length = 280435 Score = 31.2 bits (69), Expect = 0.92 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 8/50 (16%) Frame = -3 Query: 109 RQLEEQKRRQKIEMWESMQE--------GKSYKGNLKLSQQEAESGASTS 150 R++E+QKR+Q + WE Q+ GKS K ++ +++ E GA S Sbjct: 236357 REMEKQKRKQMEKAWEKQQKQLRNLKASGKSSKKATEIVKKKREPGARAS 236208 >PHYCAscaffold_5 Length = 1593284 Score = 31.2 bits (69), Expect = 0.92 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 6/90 (6%) Frame = +2 Query: 81 RRQEALLASRLRMQE-ELNAQAERYK-----EKQRQLEEQKRRQKIEMWESMQEGKSYKG 134 +R E + +++ +E EL QAE K EKQR++EEQ ++++ E +E K + Sbjct: 1162781 KRMEKEIELKMQAEEMELERQAEELKKVQEMEKQREVEEQNALEQLQALE--KEKKELEE 1162954 Query: 135 NLKLSQQEAESGASTSSAVPKSKPNKKPLR 164 KL E + A+ K+K +K L+ Sbjct: 1162955 QEKLRDLELQ-------ALEKAKERQKELQ 1163023 Score = 30.8 bits (68), Expect = 1.2 Identities = 15/63 (23%), Positives = 39/63 (61%), Gaps = 1/63 (1%) Frame = +3 Query: 60 RMRPSSQQGATGA-AVEPDMVVRRQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQ 118 + R ++ G TG + + + + + QEA ++L+ Q++ + ++ + +++ LEEQK++ Sbjct: 1121745 KTRAAAANGTTGTPSSQQEQLKKAQEAQRLAQLQEQQKKLQEQQKAEAQRKLLEEQKKKL 1121924 Query: 119 KIE 121 ++E Sbjct: 1121925 QLE 1121933 Score = 29.6 bits (65), Expect = 2.7 Identities = 25/141 (17%), Positives = 54/141 (38%) Frame = -3 Query: 4 GDRGGAGPGPGKPALEREGLELLQHTVGALLSSYGWYILLACVAIYLIVQKISPYLRMRP 63 G +GGAG G G +E LEL + +++ + + Sbjct: 234981 GVKGGAGGGRGSTWAAQERLELEE-----------------------VIENMKKVIEKLR 234871 Query: 64 SSQQGATGAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMW 123 + + AA + V + L+ +L+ Q+E Q E EK + + ++ K+++ Sbjct: 234870 AENEKLKKAAAKQASVSPERVELMRRKLKEQKEAREQLESQLEKVQHESSELKKDKVKLQ 234691 Query: 124 ESMQEGKSYKGNLKLSQQEAE 144 + ++ + + K+ E Sbjct: 234690 QKLRAKAASSNSSKVESSAFE 234628 >PHYCAscaffold_48 Length = 534789 Score = 30.8 bits (68), Expect = 1.2 Identities = 27/98 (27%), Positives = 43/98 (43%) Frame = -3 Query: 47 AIYLIVQKISPYLRMRPSSQQGATGAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKE 106 A+ IV Y R + Q + + ++ LLAS+L E + AERY Sbjct: 363694 AVRTIVNSFRRYRRRQRHRQSMTVESIAQAQLIT-----LLASKLTESETEHEAAERY-- 363536 Query: 107 KQRQLEEQKRRQKIEMWESMQEGKSYKGNLKLSQQEAE 144 R++ E++RRQ+I + + K+ QQE E Sbjct: 363535 --RRVGEERRRQRIVLLQKH----------KMEQQEIE 363458 >PHYCAscaffold_569 Length = 6017 Score = 30.4 bits (67), Expect = 1.6 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +3 Query: 119 KIEMWESMQEGKSYKGNLKLSQQEAESGASTSSAVPKSKPNK-KPLRGGGYNPLSGEGGG 177 K W ++ +G++ ++E GA+ S ++P + P + +PL GG GE GG Sbjct: 5736 KRRAWAAVGDGEA--------EEEPSLGATQSGSMPPALPGEIRPLGEGGAAASGGEAGG 5891 Query: 178 TCSWRPGRRGPSAGG 192 R +GG Sbjct: 5892 DAGEAERRAWRGSGG 5936 >PHYCAscaffold_87 Length = 182599 Score = 30.4 bits (67), Expect = 1.6 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +3 Query: 93 MQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQEGKSYKGNLKLSQQEAESGASTSSA 152 M+ L++ + ++ RQL++QKRR E +S++ K + + Q+ + T + Sbjct: 62772 MENHLSSYDHHHTKRLRQLQQQKRRVGSEEEQSVKRRKEQQQEELMLQRRITAQTKTVRS 62951 Query: 153 VPKSK 157 P SK Sbjct: 62952 SPTSK 62966 >PHYCAscaffold_40 Length = 570383 Score = 30.4 bits (67), Expect = 1.6 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = +3 Query: 32 ALLSSYGWYILLACVAIYLIVQKISPYLRMRPSSQQGATGAAVEPDMVVR-RQEALLASR 90 A+ S Y+LL V + L V+ YL + A GA + R RQ LLA Sbjct: 472647 AMTFSASTYVLLPAVVVTL-VEVGDAYLLLFLGQLLLAVGAVEWSWLAFRIRQRLLLAVN 472823 Query: 91 LRMQEELNAQAERYKEKQRQLEEQKRRQ 118 E+ + ++YK ++++ +QK+R+ Sbjct: 472824 YMKAEQRQTRPQQYKAQEKKHNKQKKRR 472907 Score = 29.6 bits (65), Expect = 2.7 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Frame = -2 Query: 77 DMVVRRQ-EALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQEGKSYKGN 135 + +VR Q E A + QE L AQ R ++KQR+LEEQ+R+ + E+ +E + + Sbjct: 367648 EALVRAQAEKEAAEAKQKQEALEAQL-REQKKQRELEEQRRKAE----EAAREAEKQR-L 367487 Query: 136 LKLSQQEAESGASTSSAVPKSKPN-KKPLRGGGYNPLSGEGGGT 178 L Q EA + + + N K+ G LSG G + Sbjct: 367486 AALQQAEAMRIKAVEEERRRQEENGKRNYDGNRLKSLSGCGSNS 367355 Score = 29.6 bits (65), Expect = 2.7 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Frame = +2 Query: 70 TGAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWES-MQE 128 T A + D +E ++RLR + QAER KQR EQ +++ W++ + E Sbjct: 374090 TRAVLHDDASDSAEETQDSTRLRSSRKQRLQAERKGGKQR---EQASALRVKNWDAGLME 374260 Query: 129 GKSYKGNL 136 + Y G + Sbjct: 374261 SEEYAGKV 374284 >PHYCAscaffold_23 Length = 821542 Score = 30.4 bits (67), Expect = 1.6 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -1 Query: 137 KLSQQEAESGASTSSAVPKSKPNKKPLRGGGYNPLSGEGGGTCSWR 182 +L QE E T P S P+K+P G N +G + SWR Sbjct: 664123 RLRPQELEHPWYTRE*TPPSPPHKRPCSAPGRNAAAGHDARSRSWR 663986 Score = 29.6 bits (65), Expect = 2.7 Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 2/77 (2%) Frame = -2 Query: 90 RLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQE-GKSYKGNLKL-SQQEAESGA 147 +L+++E+ A A + +E++R L+E + + + + G+ + KL +Q +AE+ A Sbjct: 651969 KLKLREKRAADAAKKREEERALKEAQGEDGEDAETTKKSRGQRQREKKKLRAQAKAEAKA 651790 Query: 148 STSSAVPKSKPNKKPLR 164 KSK KP++ Sbjct: 651789 EAEGGKTKSKKTPKPVK 651739 >PHYCAscaffold_20 Length = 899172 Score = 30.4 bits (67), Expect = 1.6 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = -3 Query: 82 RQEALLASRLRMQEELNAQAERYKEKQRQLEEQKR---RQKIEMWESMQEGKSYKGNLKL 138 + E L+A R ++ N ++KE QR+++E R + +++E ++ GNL Sbjct: 442663 KYEKLIAQRAVLKGLANKS--KFKENQREIQEVSRLLRESTKSLCRNLKENPNFAGNLMK 442490 Query: 139 SQQEAE 144 QQE E Sbjct: 442489 IQQERE 442472 Score = 30.4 bits (67), Expect = 1.6 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = -2 Query: 165 GGGYNPLSGEGGGTCSWRPGRRGPSAGGXG 194 GGGY G GGG WR G RG G G Sbjct: 172331 GGGYGGRGGRGGG---WRGGGRGAGGGYNG 172251 >PHYCAscaffold_10 Length = 1190366 Score = 30.4 bits (67), Expect = 1.6 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -3 Query: 105 KEKQRQLEEQ--KRRQKIEMWESMQEGKSYKGNLKLSQQEAESGASTSSAVPKSK 157 KEKQR++EEQ RQK+E + + E K+ +L + AE + A K++ Sbjct: 899301 KEKQREMEEQAEMERQKLERAQQLAEEKA-----RLEAEAAEKARLEAEAAEKAR 899152 >PHYCAscaffold_15 Length = 1032281 Score = 30.0 bits (66), Expect = 2.0 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = +2 Query: 82 RQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWES--MQEGKSYKGNLKLS 139 R+E R+R +EE AER +++Q ++EE+ RRQ+ E E + E K + + Sbjct: 897257 REEEEEKERIRREEE----AERERQRQLEVEEELRRQEEEEAEEARIAEEKEREERAQRE 897424 Query: 140 QQEAE 144 ++E E Sbjct: 897425 REEEE 897439 >PHYCAscaffold_3 Length = 1611504 Score = 30.0 bits (66), Expect = 2.0 Identities = 20/88 (22%), Positives = 37/88 (42%) Frame = -1 Query: 52 VQKISPYLRMRPSSQQGATGAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKEKQRQL 111 ++ +SP P +T +AVEP V Q S + + + E +EK+R+ Sbjct: 541542 IEAVSPVKCRLPKGSSSSTNSAVEPSSVRWPQRMAPFSSTKRTRAVALELEDDEEKRREE 541363 Query: 112 EEQKRRQKIEMWESMQEGKSYKGNLKLS 139 RR ++E + + + L L+ Sbjct: 541362 GLMARRGRLERRRTKRSNAGIRSRLCLT 541279 >PHYCAscaffold_46 Length = 525601 Score = 29.6 bits (65), Expect = 2.7 Identities = 23/93 (24%), Positives = 45/93 (48%) Frame = +1 Query: 52 VQKISPYLRMRPSSQQGATGAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKEKQRQL 111 ++++SP R A A VE +RR++ + + R +EEL + ++R+L Sbjct: 130465 LKELSPEERAAKELNDAAYDARVEESRRLRREQ--IENERRAEEELRMKMAADASERRRL 130638 Query: 112 EEQKRRQKIEMWESMQEGKSYKGNLKLSQQEAE 144 EE+ R+ E+ ++ + + +QEAE Sbjct: 130639 EEE--RKAAELAAKLEAERLAEEERVRKEQEAE 130731 >PHYCAscaffold_22 Length = 843021 Score = 29.6 bits (65), Expect = 2.7 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%) Frame = +2 Query: 54 KISPYLRMRPSSQQGAT---GAAVEPDMVVRRQE-------ALLASRLRMQEELNAQAER 103 + S L+ + SS Q A+ G + M+ R+E L+ R +EEL + R Sbjct: 359717 RASDELKQKISSIQAASSGFGGNIMEMMLFLREENEIKAEARLIEEDRRRREELELREAR 359896 Query: 104 YKEKQRQLEEQKRRQKIEMWE 124 Y+ ++R+ E+++R+ +E E Sbjct: 359897 YQAEKRETEDRRRQDLLEREE 359959 Score = 29.3 bits (64), Expect = 3.5 Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%) Frame = +1 Query: 95 EELNAQAERYKEKQRQLEEQKRRQKI--EMWESMQEGKSYKGNLKLSQQEAESGASTSSA 152 EE+ + E++ + + E+Q R++K ++W+S +EG++ G L L A G+ + Sbjct: 767143 EEIQSSKEQFASVETEREDQSRKRKRVEDVWQSREEGRA-TGEL-LLDWIAVPGSYSRWW 767316 Query: 153 VPKSKPNKKPL 163 + K+ K+PL Sbjct: 767317 LLKTDEEKEPL 767349 >PHYCAscaffold_71 Length = 252329 Score = 28.9 bits (63), Expect = 4.6 Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Frame = -2 Query: 74 VEPDMVVRRQEALLASRLRMQEELNAQA---ERYKEKQRQLEEQKRRQKIEMWESMQEGK 130 +E + +Q+ L RL +++ Q ++ KEKQRQ EQ+RRQ+ + + + Sbjct: 114670 LEQQQRLEQQKRLEQQRLEQEKQRQEQQRLEQQRKEKQRQ--EQQRRQQEQQQRLELQRR 114497 Query: 131 SYKGNLKLSQQEAESGASTSSAVP 154 + + Q + + G + VP Sbjct: 114496 QQEQQRQEQQHQFQRGKTLPQVVP 114425 >PHYCAscaffold_52 Length = 444141 Score = 28.9 bits (63), Expect = 4.6 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +1 Query: 82 RQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQEGKSYKGNLKLSQQ 141 R+E R+R +EE + + E+Y+ R+ EE R++IEM E + K SQQ Sbjct: 214654 RREREERERVR-REEASVKEEKYR---REREEDSNRREIEMERLRMERIERQEEKKQSQQ 214821 Query: 142 EAES 145 + E+ Sbjct: 214822 QFEA 214833 >PHYCAscaffold_50 Length = 475612 Score = 28.9 bits (63), Expect = 4.6 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +1 Query: 80 VRRQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQEGKSYK 133 ++R+E A L+++E + Q + +R L KRR KIEM E M K K Sbjct: 382885 LKRREESEAENLKLREMVQIQIHEARNLRRVL---KRRTKIEMMEEMLGMKRQK 383037 >PHYCAscaffold_31 Length = 686815 Score = 28.9 bits (63), Expect = 4.6 Identities = 20/82 (24%), Positives = 41/82 (50%) Frame = -1 Query: 83 QEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQEGKSYKGNLKLSQQE 142 QE + + +++ QAE KEK EEQK+ +K + ++ +E ++ ++ + Sbjct: 369121 QEEAAKPKEKKEKKQKKQAEVKKEKTEDAEEQKKTKKSKKRKAKKEAETE------TEVK 368960 Query: 143 AESGASTSSAVPKSKPNKKPLR 164 ES +++ KSK K ++ Sbjct: 368959 KESEQVETTSPKKSKKQKVEIK 368894 >PHYCAscaffold_17 Length = 985188 Score = 28.9 bits (63), Expect = 4.6 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Frame = +3 Query: 125 SMQEGKSYKGNLKLSQ----QEAESGASTSSAVPKSKPNKKP--LRGGGYNPLSGE 174 ++ E KG +K ++ ASTS A+P K +K+P L GG PLS E Sbjct: 859545 ALDEFNGRKGRMKTLTGSPFRQRSGSASTSPALPVHKGSKRPFHLESGGVPPLSLE 859712 >PHYCAscaffold_2 Length = 1925921 Score = 28.9 bits (63), Expect = 4.6 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = -1 Query: 125 SMQEGKSYKGNLKLSQQEAESGASTSSAVPKSKPNKKPLRGGGYNPLSGEGGGTCSWRPG 184 S E + K NL + + A+ P+ K ++ RGGG G GGG R Sbjct: 315704 SANEITTGKSNLAQGATFSSNEATRELTGPEEKEERRGGRGGGGG---GRGGGRGGGRGT 315534 Query: 185 RRGPSAGG 192 RG GG Sbjct: 315533 SRGTGGGG 315510 >PHYCAscaffold_1 Length = 2170955 Score = 28.5 bits (62), Expect = 5.9 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +2 Query: 81 RRQEALLASRLRMQEELNAQAERYKEKQRQLEEQKRRQKIEMWESMQEGKSYKGNLKLSQ 140 +RQE LA L QEE N E EK + L+E+ + ++ + + K G++K+ + Sbjct: 1148300 KRQELQLARELAEQEESNLMRE---EKYQSLQEEAEAKARKLKKVYTKVKEVLGDIKVME 1148470 Query: 141 Q 141 + Sbjct: 1148471 K 1148473 Score = 28.5 bits (62), Expect = 5.9 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -3 Query: 164 RGGGYNPLSGEGGGTCSW--RPGRRGPSAGGXG 194 RGGG G GGG S+ R G RG GG G Sbjct: 232830 RGGGRGGFGGRGGGRGSFGGRGGGRGGGFGGRG 232732 Score = 28.5 bits (62), Expect = 5.9 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = -3 Query: 164 RGGGYNPLSGEGGGTCSWRPGRRGPSAGGXG 194 RGGG G GGG GR G GG G Sbjct: 232800 RGGGRGSFGGRGGGRGGGFGGRGGGRGGGRG 232708 Score = 28.1 bits (61), Expect = 7.8 Identities = 41/161 (25%), Positives = 56/161 (34%), Gaps = 23/161 (14%) Frame = +1 Query: 57 PYLRMRPSSQQGATGAAVEPDMVVRRQEALLA-SRLRMQEELNAQAERYKEKQRQLEEQK 115 P L + G TGA EPD V +A +R+ A R +K R++ K Sbjct: 578470 PGLGLET*EAAGLTGAGPEPDPAVDPDPTEVAGTRVGDAWRRRRSAARDMDKARRVSCSK 578649 Query: 116 RRQKIEMWE-SMQEGKSYKGNLKLSQQEAESGASTSSAVP---------KSKPNKKPLRG 165 S + S +L S + G+S+ S P P + G Sbjct: 578650 ASSLDSASSGSSLDSASSGSSLDSSSLGSSEGSSSLSVRPVICRGRGGRTGDPRSESGLG 578829 Query: 166 GGYNPLS--GEGGGTCSWRP----------GRRGPSAGGXG 194 GG +P G GGG W G G +AGG G Sbjct: 578830 GGVSPRPDPGLGGGVSPWPDPGLGGGVPPAGLTGTTAGGFG 578952 >PHYCAscaffold_93 Length = 150113 Score = 28.1 bits (61), Expect = 7.8 Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 15/133 (11%) Frame = +2 Query: 71 GAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKE---KQRQLEEQKRRQKIEMWESMQ 127 G+ V D ++ Q + S EEL E ++ Q E Q R + + E + Sbjct: 148505 GSLVATDEILA-QLPTVQSTFTSFEELRRTVEEHQSAPPSQPAYETQHRAADVTIGEHVA 148681 Query: 128 EGKSYKGNLKLSQQEAESGASTSSAVPK-------SKPNKKPLRGGGYNPLS-GE----G 175 ++ L +EA +T K PN++PLR G P+S GE G Sbjct: 148682 NARTVSTTAPLPPREAP--VTTDEITGKWFDGGSTRNPNRQPLRQGRAKPVSTGEDTHSG 148855 Query: 176 GGTCSWRPGRRGP 188 S R G+ GP Sbjct: 148856 QEVLSARTGQTGP 148894 >PHYCAscaffold_27 Length = 705730 Score = 28.1 bits (61), Expect = 7.8 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%) Frame = +3 Query: 51 IVQKISPYLRM---RPSSQQGATGAAVEPDMVVRRQEALLASRLRMQEELNAQAERYKEK 107 +VQ + PYLRM R + + A A V+ E L+ +R R EL + E+++E Sbjct: 560268 LVQSVPPYLRMKACRAVAGKLALMARVDSQPHQNDTEGLVGTRFR--NELVGKMEKWQEP 560441 Query: 108 QRQLEEQKRRQKIEMWESMQEGKSYK 133 Q+ ++ E + GK Y+ Sbjct: 560442 QKAKSKKALPIPDEKPSRKRGGKRYR 560519 >PHYCAscaffold_18 Length = 984210 Score = 28.1 bits (61), Expect = 7.8 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = -3 Query: 83 QEALLASRLRMQEELNAQAERYKEKQRQLEEQKR 116 +EALLA R ++E A+R+K Q+ L+EQ++ Sbjct: 880828 KEALLAVIRRKEQEATTLAKRFKLLQQTLKEQQK 880727 >PHYCAscaffold_7 Length = 1368812 Score = 28.1 bits (61), Expect = 7.8 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Frame = +3 Query: 123 WESMQEGKSYKGNLKLSQQEAESGASTSSAVPKSKPNKKPLRGGGYNPLSGEGGGTCSW- 181 W S+ G S KGN +S S S SSA P+S ++ P G SW Sbjct: 150399 WASLGSGGSTKGNA*VSSTSTFSS*S-SSASPRSSSSR*LCSKSMRKPEKSSSGSRTSWS 150575 Query: 182 RPGRRGPSAG 191 R GR S G Sbjct: 150576 RSGRA*LSLG 150605 Database: P.capsici/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 64,023,748 Number of sequences in database: 917 Lambda K H 0.311 0.131 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,981,952 Number of Sequences: 917 Number of extensions: 193994 Number of successful extensions: 1333 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 76 Number of HSP's that attempted gapping in prelim test: 728 Number of HSP's gapped (non-prelim): 1034 length of query: 194 length of database: 21,341,249 effective HSP length: 99 effective length of query: 95 effective length of database: 21,250,466 effective search space: 2018794270 effective search space used: 2018794270 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 60 (27.7 bits)