TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|298286511|ref|NP_001177244.1| selenoprotein S [Ciona
intestinalis]
         (204 letters)

Database: G.niphandrodes/genome.fa 
           3680 sequences; 15,362,869 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|338241610|gb|AFNH01002360.1| Gregarina niphandrodes asmbl.310...    35   0.022
gi|338243196|gb|AFNH01001567.1| Gregarina niphandrodes asmbl.237...    32   0.11 
gi|338243757|gb|AFNH01001286.1| Gregarina niphandrodes asmbl.212...    32   0.11 
gi|338239282|gb|AFNH01003524.1| Gregarina niphandrodes asmbl.856...    32   0.19 
gi|338243759|gb|AFNH01001285.1| Gregarina niphandrodes asmbl.212...    32   0.19 
gi|338242810|gb|AFNH01001760.1| Gregarina niphandrodes asmbl.255...    31   0.32 
gi|338242335|gb|AFNH01001997.1| Gregarina niphandrodes asmbl.277...    30   0.42 
gi|338242215|gb|AFNH01002057.1| Gregarina niphandrodes asmbl.282...    30   0.55 
gi|338242467|gb|AFNH01001931.1| Gregarina niphandrodes asmbl.271...    30   0.55 
gi|338243556|gb|AFNH01001387.1| Gregarina niphandrodes asmbl.221...    30   0.55 
gi|338239550|gb|AFNH01003391.1| Gregarina niphandrodes asmbl.736...    30   0.72 
gi|338241700|gb|AFNH01002315.1| Gregarina niphandrodes asmbl.306...    30   0.72 
gi|338242397|gb|AFNH01001966.1| Gregarina niphandrodes asmbl.274...    30   0.72 
gi|338244917|gb|AFNH01000706.1| Gregarina niphandrodes asmbl.160...    30   0.72 
gi|338241067|gb|AFNH01002633.1| Gregarina niphandrodes asmbl.335...    29   0.94 
gi|338239395|gb|AFNH01003468.1| Gregarina niphandrodes asmbl.805...    29   1.2  
gi|338240463|gb|AFNH01002934.1| Gregarina niphandrodes asmbl.363...    29   1.2  
gi|338241039|gb|AFNH01002647.1| Gregarina niphandrodes asmbl.337...    28   1.6  
gi|338241233|gb|AFNH01002550.1| Gregarina niphandrodes asmbl.328...    28   1.6  
gi|338242333|gb|AFNH01001998.1| Gregarina niphandrodes asmbl.277...    28   1.6  
gi|338241532|gb|AFNH01002399.1| Gregarina niphandrodes asmbl.314...    28   2.1  
gi|338243000|gb|AFNH01001665.1| Gregarina niphandrodes asmbl.246...    28   2.1  
gi|338240535|gb|AFNH01002898.1| Gregarina niphandrodes asmbl.360...    28   2.7  
gi|338241434|gb|AFNH01002448.1| Gregarina niphandrodes asmbl.318...    28   2.7  
gi|338242491|gb|AFNH01001919.1| Gregarina niphandrodes asmbl.270...    28   2.7  
gi|338242564|gb|AFNH01001883.1| Gregarina niphandrodes asmbl.266...    28   2.7  
gi|338242874|gb|AFNH01001728.1| Gregarina niphandrodes asmbl.252...    28   2.7  
gi|338240596|gb|AFNH01002868.1| Gregarina niphandrodes asmbl.357...    27   4.7  
gi|338241109|gb|AFNH01002612.1| Gregarina niphandrodes asmbl.333...    27   4.7  
gi|338241584|gb|AFNH01002373.1| Gregarina niphandrodes asmbl.311...    27   4.7  
gi|338242896|gb|AFNH01001717.1| Gregarina niphandrodes asmbl.251...    27   4.7  
gi|338241338|gb|AFNH01002496.1| Gregarina niphandrodes asmbl.323...    27   6.1  
gi|338241772|gb|AFNH01002279.1| Gregarina niphandrodes asmbl.302...    27   6.1  
gi|338242197|gb|AFNH01002066.1| Gregarina niphandrodes asmbl.283...    27   6.1  
gi|338242401|gb|AFNH01001964.1| Gregarina niphandrodes asmbl.274...    27   6.1  
gi|338243691|gb|AFNH01001319.1| Gregarina niphandrodes asmbl.215...    27   6.1  
gi|338240847|gb|AFNH01002743.1| Gregarina niphandrodes asmbl.346...    26   8.0  
gi|338242822|gb|AFNH01001754.1| Gregarina niphandrodes asmbl.255...    26   8.0  
gi|338243530|gb|AFNH01001400.1| Gregarina niphandrodes asmbl.222...    26   8.0  
gi|338244931|gb|AFNH01000699.1| Gregarina niphandrodes asmbl.160...    26   8.0  

>gi|338241610|gb|AFNH01002360.1| Gregarina niphandrodes asmbl.3104,
            whole genome shotgun sequence
          Length = 5617

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = -1

Query: 83   ENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQ---EEQKRMQKINDHDALK 138
            + M  +Q  AR   + R ++  ++R   AARE ++R REQ   EE++R + +    A+K
Sbjct: 4432 QQMARDQQMARDQQLARDQQLARERESLAARERKQRAREQAAAEERQRAEAVKREQAVK 4256


>gi|338243196|gb|AFNH01001567.1| Gregarina niphandrodes asmbl.2379,
            whole genome shotgun sequence
          Length = 7378

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +1

Query: 83   ENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHD 135
            E     +VE     MER +++L+ + + AAR  + R   ++E+KR ++++D D
Sbjct: 7204 ERKLERKVEREETKMERKQRRLRKKEEKAAR-RQAREERRQERKRKREMDDWD 7359


>gi|338243757|gb|AFNH01001286.1| Gregarina niphandrodes asmbl.2121,
           whole genome shotgun sequence
          Length = 1046

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +3

Query: 83  ENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHD 135
           E     +VE     MER +++L+ + + AAR  + R   ++E+KR ++++D D
Sbjct: 51  ERKLERKVEREETKMERKQRRLRKKEEKAAR-RQAREERRQERKRKREMDDWD 206


>gi|338239282|gb|AFNH01003524.1| Gregarina niphandrodes asmbl.856,
           whole genome shotgun sequence
          Length = 1195

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 129 QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
           QK+ DHD LK      +T  KL  +P PN+  + +I  +  +  L  S  S
Sbjct: 387 QKVKDHDILKIYCQNFRTKPKLTYQPQPNKPLRLYIDTSNVAVGLNLSQGS 235


>gi|338243759|gb|AFNH01001285.1| Gregarina niphandrodes asmbl.2120,
           whole genome shotgun sequence
          Length = 1049

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 129 QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
           QK+ DHD LK      +T  KL  +P PN+  + +I  +  +  L  S  S
Sbjct: 97  QKVKDHDILKIYCQNFRTKPKLTYQPQPNKPLRLYIDTSNVAVGLNLSQGS 249



 Score = 31.6 bits (70), Expect = 0.19
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 129 QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
           QK+ DHD LK      +T  KL  +P PN+  + +I  +  +  L  S  S
Sbjct: 915 QKVKDHDILKIYCQNFRTKPKLTYQPQPNKPLRLYIDTSNVAVGLNLSQGS 763


>gi|338242810|gb|AFNH01001760.1| Gregarina niphandrodes asmbl.2557,
            whole genome shotgun sequence
          Length = 7512

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
 Frame = -3

Query: 88   EQVEARSVAMERARKKLQDRHDAAAREH--EERLREQEEQKRMQKINDHD-ALKAGKTQS 144
            EQ+  R  A E   +KLQ   +A  + H  EE LR Q+E+++ Q+  + +  L+  + Q 
Sbjct: 5845 EQLAQRLRARESQLEKLQQEREALLQTHQEEEVLRRQDEEEKEQRGRERERQLETVQRQL 5666

Query: 145  KT-SKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPL 181
            +   ++L++     Q      +   E+   R+S+ + L
Sbjct: 5665 EALQRQLEETNSKEQLVARRAEDLSEAASQRASELATL 5552


>gi|338242335|gb|AFNH01001997.1| Gregarina niphandrodes asmbl.2772,
            whole genome shotgun sequence
          Length = 8566

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
 Frame = +1

Query: 61   WTNIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLR 120
            W  + +S + ++ R        E     +     + M R R++L+       R    R R
Sbjct: 2173 WEKVRRSRELIWVRMCPQMSCPERPRTSRRRQLRLRMSRQRQQLRRSRRCRCRFRRRRRR 2352

Query: 121  EQEEQK--RMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDF 178
             +  Q+  R QK+      ++ K     S++  ++   N   Q  +  +  S    ++ F
Sbjct: 2353 NRRLQRLWRSQKVRAWRRRRSTKITRPVSRRHRKRNCVNGLKQKDVTWSWTSP---ATSF 2523

Query: 179  SPLGGGPSNSARWR 192
            +P G GP    RWR
Sbjct: 2524 TPSGVGPQCRTRWR 2565


>gi|338242215|gb|AFNH01002057.1| Gregarina niphandrodes asmbl.2829,
            whole genome shotgun sequence
          Length = 3911

 Score = 30.0 bits (66), Expect = 0.55
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
 Frame = -3

Query: 141  KTQSKT--------SKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSP-------LGGGP 185
            KT +KT        S      PDP   +++H++R  ++ PLR + +SP       L    
Sbjct: 2046 KTPTKTYPTKPTSDSSAYTASPDPTTHSEAHLRRFLKTTPLRITLYSPPRLTKARLKKTR 1867

Query: 186  SNSARWRPG 194
                 WRPG
Sbjct: 1866 HEQTNWRPG 1840


>gi|338242467|gb|AFNH01001931.1| Gregarina niphandrodes asmbl.2711,
             whole genome shotgun sequence
          Length = 34847

 Score = 30.0 bits (66), Expect = 0.55
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 94    SVAMERARKKLQDRHDAAAREHEERLREQEEQK 126
             S+ ++R R++ Q RH   AR    RLR Q  Q+
Sbjct: 12486 SLHLQRRRRRSQSRHQRLARRSTSRLRRQSTQR 12388


>gi|338243556|gb|AFNH01001387.1| Gregarina niphandrodes asmbl.2213,
           whole genome shotgun sequence
          Length = 1815

 Score = 30.0 bits (66), Expect = 0.55
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 129 QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
           QK+ DHD LK      +T  +L  +P PN+  + +I  +  +  L  S  S
Sbjct: 886 QKVKDHDILKIYCQNFRTKPQLTYQPQPNKPLRLYIDTSNVAVGLNLSQGS 734


>gi|338239550|gb|AFNH01003391.1| Gregarina niphandrodes asmbl.736,
            whole genome shotgun sequence
          Length = 2374

 Score = 29.6 bits (65), Expect = 0.72
 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
 Frame = -2

Query: 80   DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKA 139
            DD +   P + +     M + R   Q+       E ++++   +E K  +K+N H+A  A
Sbjct: 1110 DDEDAKCPTKRQRSGTKMWKPRTPQQEDEAKKRSEKKKKVNTIKEAKAKKKLNIHNARLA 931

Query: 140  GKT------QSKTSKKLDQK 153
             KT       S T KK+  K
Sbjct: 930  KKTGRVVGNYSPTGKKVGDK 871


>gi|338241700|gb|AFNH01002315.1| Gregarina niphandrodes asmbl.3062,
            whole genome shotgun sequence
          Length = 6770

 Score = 29.6 bits (65), Expect = 0.72
 Identities = 18/100 (18%), Positives = 40/100 (40%)
 Frame = -2

Query: 87   PEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKT 146
            P + E  +   E +R++  ++ + ++R  E   RE+  ++    I     L      +  
Sbjct: 5917 PNRREESNQREESSRREESNQREESSRREESSRREESSRREGVAIVITSPLSPTPPPTSR 5738

Query: 147  SKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPS 186
                  K  PN+   S +  + E+    ++   P+ G P+
Sbjct: 5737 GHPFPGKAQPNRLVGSSVSSSSEASGSPAAGVRPVAGSPA 5618


>gi|338242397|gb|AFNH01001966.1| Gregarina niphandrodes asmbl.2744,
             whole genome shotgun sequence
          Length = 14893

 Score = 29.6 bits (65), Expect = 0.72
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 154   PDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSAR 190
             P PN  T+S +  + ES PLR+   SPLGG  S   R
Sbjct: 12278 PVPNDLTES-LPLSAESLPLRTPSPSPLGGPASGERR 12171


>gi|338244917|gb|AFNH01000706.1| Gregarina niphandrodes asmbl.16011,
             whole genome shotgun sequence
          Length = 22759

 Score = 29.6 bits (65), Expect = 0.72
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = -2

Query: 141   KTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSP-----LGGGPSNSARWRPGN 195
             K+++  S  +D  P+  +A  S  ++  E+ P  SS   P      G GP+   RW+   
Sbjct: 17367 KSRTMKSYSMDLMPNSRKARSS--RKWTETAPSSSSYLRPRSSNSAGPGPTRKRRWKTST 17194

Query: 196   SRPSA 200
               PSA
Sbjct: 17193 DSPSA 17179


>gi|338241067|gb|AFNH01002633.1| Gregarina niphandrodes asmbl.3359,
             whole genome shotgun sequence
          Length = 62082

 Score = 29.3 bits (64), Expect = 0.94
 Identities = 25/89 (28%), Positives = 35/89 (39%)
 Frame = +2

Query: 112   AREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESK 171
             AREHE   RE E ++   +  D    KA  T       L    D  ++  +H+ RN    
Sbjct: 21305 AREHEHEAREHEAREHEAREQDVSRFKARSTLPDLRLHLPNLGD-MRSWHTHVSRN---- 21469

Query: 172   PLRSSDFSPLGGGPSNSARWRPGNSRPSA 200
              +R    SP      + AR +P   R  A
Sbjct: 21470 GVRLPPLSPSAKARLDRARCQPAKLRSLA 21556


>gi|338239395|gb|AFNH01003468.1| Gregarina niphandrodes asmbl.805,
           whole genome shotgun sequence
          Length = 1428

 Score = 28.9 bits (63), Expect = 1.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 129 QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFS 179
           QK+ D+D LK      +T  KL  +P PN+  + +I  +  +  L  S  S
Sbjct: 647 QKVKDNDILKIYCQNFRTKPKLTYQPQPNKPLRLYIDTSNVAVGLNLSQGS 495


>gi|338240463|gb|AFNH01002934.1| Gregarina niphandrodes asmbl.3639,
            whole genome shotgun sequence
          Length = 9307

 Score = 28.9 bits (63), Expect = 1.2
 Identities = 16/51 (31%), Positives = 20/51 (39%)
 Frame = -2

Query: 154  PDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSRPSAGGXG 204
            P P  A     ++  ES+   S+ F     GPS   R R    RP   G G
Sbjct: 1272 PSPGPAPAPSWRQESESRRSGSTSFETFTSGPSMDLRPRRWGPRPPGAGGG 1120


>gi|338241039|gb|AFNH01002647.1| Gregarina niphandrodes asmbl.3372,
            whole genome shotgun sequence
          Length = 18266

 Score = 28.5 bits (62), Expect = 1.6
 Identities = 15/66 (22%), Positives = 32/66 (48%)
 Frame = -1

Query: 117  ERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSS 176
            +RLR+ +EQ++ +++ND +    G+ +S  S     +    +  + H++R +        
Sbjct: 6560 DRLRKAKEQRKGKRVNDSEGADRGEGESSASSDSSLRV---EVGKKHVERQQNEADGNEL 6390

Query: 177  DFSPLG 182
            D S  G
Sbjct: 6389 DVSVSG 6372


>gi|338241233|gb|AFNH01002550.1| Gregarina niphandrodes asmbl.3280,
           whole genome shotgun sequence
          Length = 1540

 Score = 28.5 bits (62), Expect = 1.6
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 145 KTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGG 184
           +TSKK D+KP P   T   +     S+ +RS     LGGG
Sbjct: 449 RTSKKGDRKPRPGSMTAQQL-----SQLMRSGSLLDLGGG 345


>gi|338242333|gb|AFNH01001998.1| Gregarina niphandrodes asmbl.2773,
             whole genome shotgun sequence
          Length = 20732

 Score = 28.5 bits (62), Expect = 1.6
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +1

Query: 142   TQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSRPS 199
             T  K    L++   PN+  +S  K    + P  +S  S L  GP    +WRPG +R S
Sbjct: 10111 TAVKKRLPLEKLSTPNRRPKSSSKFPSTNPPPATSWVSRLDPGPG--LKWRPGRNRRS 10278


>gi|338241532|gb|AFNH01002399.1| Gregarina niphandrodes asmbl.3143,
           whole genome shotgun sequence
          Length = 11334

 Score = 28.1 bits (61), Expect = 2.1
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +1

Query: 164 IKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSRPSA 200
           + R   S   R  D S L  GPS  ++WR  +SRPSA
Sbjct: 649 VSRQAASHTTRG*DISSLSCGPS*RSKWR--SSRPSA 753


>gi|338243000|gb|AFNH01001665.1| Gregarina niphandrodes asmbl.2468,
            whole genome shotgun sequence
          Length = 15668

 Score = 28.1 bits (61), Expect = 2.1
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = -1

Query: 149  KLDQKPDPNQAT--QSHIKRN--KESKPLRSSDFSPLGGGPSNSARWRPGNSRPSAGG 202
            +L + P P +A     H  RN  +ES P+R  +   L   P  S + RPG+ R S  G
Sbjct: 9092 QLSRHPSPAEAVCLPEHPGRNPPQESDPVRPEERPDLLARPGQSPQDRPGDRRESHPG 8919


>gi|338240535|gb|AFNH01002898.1| Gregarina niphandrodes asmbl.3605,
            whole genome shotgun sequence
          Length = 34762

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +2

Query: 110  AAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQ 158
            +AA   EER RE  +Q+  Q+ N+H  L A   Q +++K  D   + N+
Sbjct: 9485 SAATAWEERAREPPQQEPPQQENEHSGLCASPDQ-RSAKVRDPLVEDNR 9628


>gi|338241434|gb|AFNH01002448.1| Gregarina niphandrodes asmbl.3188,
            whole genome shotgun sequence
          Length = 22809

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 20/76 (26%), Positives = 36/76 (47%)
 Frame = +1

Query: 81   DTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAG 140
            + E    E+ + +  A E   KK       AARE +++ R+QEE+K  ++          
Sbjct: 5356 ERERKEKEKKKEKKAAQEEKEKK------KAAREEQDKNRKQEEKKEKRE---------- 5487

Query: 141  KTQSKTSKKLDQKPDP 156
             +++ TSK+  +  DP
Sbjct: 5488 -SKNLTSKQKAKAKDP 5532


>gi|338242491|gb|AFNH01001919.1| Gregarina niphandrodes asmbl.2700,
            whole genome shotgun sequence
          Length = 7567

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
 Frame = +2

Query: 116  EERLREQEEQKRMQKIN--DHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPL 173
            EER   QE  K  ++ N    D  + G  Q       DQ+PD N         +++    
Sbjct: 2516 EERKSGQESAKGGEEHNYRSTDQRQHGGGQGTVRPNQDQRPDHNGLGHGRGSFDRDPDDY 2695

Query: 174  RSSDFSPLGGGPS 186
            R  D+ P   GPS
Sbjct: 2696 RPGDYGPGIQGPS 2734


>gi|338242564|gb|AFNH01001883.1| Gregarina niphandrodes asmbl.2669,
            whole genome shotgun sequence
          Length = 19534

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = -2

Query: 64   IEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQE 123
            ++ S++N F R   +     ++  E +EAR           + R  A+ARE  +   + E
Sbjct: 5292 LQSSIRNYFHRDPVFVTLARHVFREHMEARVFTQGDPNAPCRHRLRASAREKPQTEEQAE 5113

Query: 124  EQKRMQKI 131
            +  R+Q +
Sbjct: 5112 KIARLQDV 5089


>gi|338242874|gb|AFNH01001728.1| Gregarina niphandrodes asmbl.2526,
            whole genome shotgun sequence
          Length = 9074

 Score = 27.7 bits (60), Expect = 2.7
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 14/92 (15%)
 Frame = +3

Query: 75   RKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEER--------------LR 120
            ++TY ++ E    + VE R +        L+  HD    +++ R               +
Sbjct: 8232 KETYKEELEKYERDMVELRGINKALEDANLRALHDVETLQNQNRDLRSEVEKLNRDMDRQ 8411

Query: 121  EQEEQKRMQKINDHDALKAGKTQSKTSKKLDQ 152
            EQ + K  Q I + +    G+ Q+   K L Q
Sbjct: 8412 EQRQHKAQQNIMELEGKLRGEQQAFEQKVLQQ 8507


>gi|338240596|gb|AFNH01002868.1| Gregarina niphandrodes asmbl.3579,
            whole genome shotgun sequence
          Length = 7132

 Score = 26.9 bits (58), Expect = 4.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 180  PLGGGPSNSARWRPGNSRPSA 200
            P+G   S+ AR RP NSRP A
Sbjct: 2215 PVGSNTSSRARSRPRNSRPRA 2277


>gi|338241109|gb|AFNH01002612.1| Gregarina niphandrodes asmbl.3339,
            whole genome shotgun sequence
          Length = 4684

 Score = 26.9 bits (58), Expect = 4.7
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +1

Query: 142  TQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRP 193
            T+S T   +D  P P++ T S         P  +S   P  G PS  +   P
Sbjct: 1921 TRSPTKPTMDSSPSPSKTTLSTYVITLTKSPPPTSTSPPESGSPSRLSHPNP 2076


>gi|338241584|gb|AFNH01002373.1| Gregarina niphandrodes asmbl.3117,
            whole genome shotgun sequence
          Length = 18343

 Score = 26.9 bits (58), Expect = 4.7
 Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
 Frame = -1

Query: 110  AAAREHEERLREQEEQKRMQKINDHDALKAG-KTQSKTSKKLDQKPDPNQATQSHIKRNK 168
            ++AR H+     +E  +   + +   A ++G +T+SK++          Q+++++ +R  
Sbjct: 8971 SSARSHKSGSSGEEPTE--SRSSSRSASRSGSRTESKSA----------QSSRNNPRRGS 8828

Query: 169  ESKPLRSSDFSPLGGGPSNSARWRPGNSRPSAGG 202
             ++  RS+  +P  G P   A W+   S   AGG
Sbjct: 8827 WTRNDRSNGSNPRPGDPRWPAEWKTQESVLGAGG 8726


>gi|338242896|gb|AFNH01001717.1| Gregarina niphandrodes asmbl.2515,
            whole genome shotgun sequence
          Length = 18286

 Score = 26.9 bits (58), Expect = 4.7
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 91   EARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGK 141
            E R   MERARK+ +D     AR  ++   ++ E + M++I DH  L++GK
Sbjct: 6624 ELRFKDMERARKRYEDLVKLTARGQDK--GKKAECEMMKEILDH--LESGK 6764


>gi|338241338|gb|AFNH01002496.1| Gregarina niphandrodes asmbl.3230,
           whole genome shotgun sequence
          Length = 18089

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 170 SKPLRSSDFSPLGGGPSNSARWRPGNSRPS 199
           S+P  S  FS   GGPSN  R+ P    PS
Sbjct: 190 SRPRFSVSFSTTLGGPSNKYRYPPLTPGPS 101


>gi|338241772|gb|AFNH01002279.1| Gregarina niphandrodes asmbl.3028,
            whole genome shotgun sequence
          Length = 14770

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 171  KPLRSSDFSPLGGGPSNSARWRPGNSRPS 199
            +P+ S + SPLGG P+      PG   PS
Sbjct: 5299 RPVGSFETSPLGGSPTGRPCASPGQPLPS 5213


>gi|338242197|gb|AFNH01002066.1| Gregarina niphandrodes asmbl.2837,
            whole genome shotgun sequence
          Length = 6154

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 21/64 (32%), Positives = 26/64 (40%)
 Frame = +3

Query: 139  AGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSRP 198
            A KT+ K     D +     A  S    + E    RS   S   GG     R+RPG SR 
Sbjct: 2700 AAKTRRKPQTSTDVRRAGLSAGFSDGLVSSEGGACRSPRMSNRPGGSRPGPRFRPGGSRW 2879

Query: 199  SAGG 202
             +GG
Sbjct: 2880 *SGG 2891


>gi|338242401|gb|AFNH01001964.1| Gregarina niphandrodes asmbl.2742,
            whole genome shotgun sequence
          Length = 14790

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
 Frame = -1

Query: 76   KTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQE--------EQKR 127
            K + DD     P Q E   + + +  + ++DR     R   +R  E E        EQK 
Sbjct: 1887 KNHKDDERLRMPIQNEPNPMVILQISELVRDR--LVLRTKRKRAVETEFANSRRLLEQKD 1714

Query: 128  MQKINDHDALKAGKTQSKTSKKLDQKPDP 156
              +    DA  +GKT+S T+K   Q+P P
Sbjct: 1713 AARPARGDASDSGKTKSATTK---QQPRP 1636


>gi|338243691|gb|AFNH01001319.1| Gregarina niphandrodes asmbl.2152,
           whole genome shotgun sequence
          Length = 1732

 Score = 26.6 bits (57), Expect = 6.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 164 IKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSR 197
           + R+  S+  R  D S L  GPS  +RWR   SR
Sbjct: 517 VLRHAASRTKRG*DISSLSCGPSWRSRWRSS*SR 618


>gi|338240847|gb|AFNH01002743.1| Gregarina niphandrodes asmbl.3461,
            whole genome shotgun sequence
          Length = 12589

 Score = 26.2 bits (56), Expect = 8.0
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
 Frame = -1

Query: 88   EQVEARSVAMERARKKLQDRHDAAARE--HEERLREQEEQKRMQKINDHDALKAGKTQSK 145
            ++ + R+  +  A++++ DR   A+R     +    +  Q+ ++ + ++DA K  +  S 
Sbjct: 5023 DKEDVRASRLAEAQRRVSDREFEASRPVLDGDGCSSERLQRFVEAVKENDAAKYAEVYSS 4844

Query: 146  TSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLG-GGPSNSARWRPGNSRPS 199
                                   +S P    + SP     P  S  W PG  RP+
Sbjct: 4843 -----------------------KSLPFHHDELSPFWFKAPCGSGMWVPGEPRPT 4748


>gi|338242822|gb|AFNH01001754.1| Gregarina niphandrodes asmbl.2550,
            whole genome shotgun sequence
          Length = 48726

 Score = 26.2 bits (56), Expect = 8.0
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 167  NKESKPLRSSDFSPLGGGPSNSARWRPGNSRPSA 200
            N  S  L SSD +P  G P N A   P N  P +
Sbjct: 2548 NLTSSNLTSSDLTPSNGAPPNGA---PSNGTPES 2456


>gi|338243530|gb|AFNH01001400.1| Gregarina niphandrodes asmbl.2225,
           whole genome shotgun sequence
          Length = 1089

 Score = 26.2 bits (56), Expect = 8.0
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
 Frame = -3

Query: 137 LKAGKTQSKTSKKLDQKPDPNQATQS-------HIKRNKESKPLRSSDFSPLGGGPSNSA 189
           L  G +  +    +  +P+    TQ         + R   S+  R  D S L  GPS  +
Sbjct: 202 LHRGLSPRRKQHHVSSRPETYGRTQRWRASSTRRVSRRAASRTKRGGDISSLSCGPSWRS 23

Query: 190 RWR 192
           +WR
Sbjct: 22  KWR 14


>gi|338244931|gb|AFNH01000699.1| Gregarina niphandrodes asmbl.16005,
           whole genome shotgun sequence
          Length = 29705

 Score = 26.2 bits (56), Expect = 8.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 47  GWFLLFGFVAAMFVWTNIEKSVKNLFGRRKTYYD 80
           GW+   G+    FVW+ ++K V +   R +  YD
Sbjct: 472 GWYTRCGWQTYRFVWSLLQKGVADGTSRCRLPYD 371


  Database: G.niphandrodes/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 15,362,869
  Number of sequences in database:  3680
  
Lambda     K      H
   0.312    0.129    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,737,479
Number of Sequences: 3680
Number of extensions: 51999
Number of successful extensions: 453
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of query: 204
length of database: 5,120,956
effective HSP length: 90
effective length of query: 114
effective length of database: 4,789,756
effective search space: 546032184
effective search space used: 546032184
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)