TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|298286511|ref|NP_001177244.1| selenoprotein S [Ciona intestinalis] (204 letters) Database: F.cylindrus/genome.fa 271 sequences; 80,540,407 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value scaffold_65 36 0.039 scaffold_21 36 0.039 scaffold_15 35 0.067 scaffold_6 35 0.067 scaffold_8 35 0.087 scaffold_18 34 0.19 scaffold_89 33 0.25 scaffold_7 33 0.25 scaffold_66 33 0.33 scaffold_25 33 0.33 scaffold_86 33 0.43 scaffold_13 33 0.43 scaffold_2 32 0.56 scaffold_37 31 1.3 scaffold_23 31 1.3 scaffold_10 31 1.3 scaffold_4 31 1.3 scaffold_35 31 1.6 scaffold_9 31 1.6 scaffold_28 30 2.8 scaffold_26 30 2.8 scaffold_16 30 2.8 scaffold_3 30 2.8 scaffold_1 30 3.7 scaffold_30 29 4.8 scaffold_11 29 4.8 scaffold_81 29 6.2 scaffold_63 28 8.1 scaffold_40 28 8.1 >scaffold_65 Length = 283846 Score = 36.2 bits (82), Expect = 0.039 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Frame = -3 Query: 80 DDTENM---TPEQ--VEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDH 134 DDTEN T Q + S+A+ K+ ++ HE+RLRE+EE+ R + + Sbjct: 40106 DDTENSGLKTNSQFFIPFESIALPNGNTKMLKTEKKFSKYHEDRLREEEEKFRKENFENE 39927 Query: 135 DALKAGKTQSKTSKKLDQKP---DPNQATQSHIKRNKESKPLRS 175 + + S + Q P +++++ I +K K L S Sbjct: 39926 EVSTSESEPESKSPQESQSPLSSTSSKSSEPDILMSKTRKRLES 39795 >scaffold_21 Length = 951085 Score = 36.2 bits (82), Expect = 0.039 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Frame = -3 Query: 80 DDTENM---TPEQ--VEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDH 134 DDTEN T Q + S+A+ K+ ++ HE+RLRE+EE+ R + + Sbjct: 200990 DDTENSGLKTNSQFFIPFESIALPNGNTKMLKTEKKFSKYHEDRLREEEEKFRKENFENE 200811 Query: 135 DALKAGKTQSKTSKKLDQKP---DPNQATQSHIKRNKESKPLRS 175 + + S + Q P +++++ I +K K L S Sbjct: 200810 EVSTSESEPESKSPQESQSPLSSTSSKSSEPDILMSKTRKRLES 200679 >scaffold_15 Length = 1348792 Score = 35.4 bits (80), Expect = 0.067 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = +1 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTS 147 E+V + + KKL R + ++ +EQK +IN D+ ++ Q Sbjct: 1184800 EEVHTTADSCSNNEKKLSHRRQEKTSDEGKKNLSDDEQKSNDEINS-DSHRSNSCQQPRE 1184976 Query: 148 KKLDQKPDPNQATQSHIKRNKES 170 +K+D+K P + + +RN ES Sbjct: 1184977 EKVDKKRRPQSSDEPSDERNTES 1185045 Score = 35.0 bits (79), Expect = 0.087 Identities = 21/66 (31%), Positives = 32/66 (48%) Frame = -3 Query: 137 LKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPGNS 196 L+ K ++K S K P+ ++ NK K +RSS+ SP NS ++ P NS Sbjct: 312191 LRQRKRETKMSSKRSISPNNKRSASPVPSNNKRLKTIRSSNNSP-----KNSPKYSPNNS 312027 Query: 197 RPSAGG 202 + GG Sbjct: 312026 NNNRGG 312009 >scaffold_6 Length = 2967614 Score = 35.4 bits (80), Expect = 0.067 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = +2 Query: 113 REHEERLREQEEQKRMQKINDHDALKAGKTQS-----KTSKKLDQKPDPNQATQSHIKRN 167 R EE+ +E++++KR +K D LK T S +SKKLDQ ++ + K+N Sbjct: 1313069 RRIEEKEQEEKDRKRWKKQRKRDKLKNDPTMSISSSSSSSKKLDQNKTSDEVQTNSNKKN 1313248 Query: 168 K 168 K Sbjct: 1313249 K 1313251 Score = 30.0 bits (66), Expect = 2.8 Identities = 24/90 (26%), Positives = 36/90 (40%) Frame = +3 Query: 81 DTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAG 140 D +N + +R + + KK D H+ E+E K D D Sbjct: 2360949 DDDNQNRVRRSSRKIG-DTNNKKTDDEHEDDDDENENENETDTNNKGTNDDEDDD--DES 2361119 Query: 141 KTQSKTSKKLDQKPDPNQATQSHIKRNKES 170 KTQ K KKL K + NQ T +++ +S Sbjct: 2361120 KTQRKKIKKLPTKKNLNQPTLEAMEKYLKS 2361209 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 144 SKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSP 180 S TSK K + +S ++ + S PL+SS FSP Sbjct: 2311104 SFTSKSSTLKQRSSSTLKSSTRKQRSSSPLKSSSFSP 2311214 >scaffold_8 Length = 2651504 Score = 35.0 bits (79), Expect = 0.087 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 15/116 (12%) Frame = -2 Query: 98 ERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLD----QK 153 ER R+K D E RLR +EEQ + HD L A + ++KT+ +L+ Q Sbjct: 1369663 ERERRKRADTEKKRLTEERRRLRAEEEQLLQDR---HDKL-AKEKKTKTANRLEYLFKQS 1369496 Query: 154 P----------DPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPG-NSRP 198 P +AT + + KE+ + GGG S+S+ NS+P Sbjct: 1369495 PIFAKLRKGEGSMEEATNADAEFEKEAAAAAAKKSKKKGGGRSSSSNGNSNKNSKP 1369328 Score = 28.9 bits (63), Expect = 6.2 Identities = 15/55 (27%), Positives = 28/55 (50%) Frame = +3 Query: 113 REHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRN 167 R ++ L QE ND+++ + GK + T D+K + N ++ +H KR+ Sbjct: 233793 RNYKHILLSQEHDS-----NDNNSRRGGKNNAATEDDDDEKEEDNNSSTNHNKRD 233942 Score = 28.5 bits (62), Expect = 8.1 Identities = 23/115 (20%), Positives = 43/115 (37%) Frame = +1 Query: 63 NIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQ 122 N K V G + T DD ++ + + S + + ++ D + E R R Sbjct: 302008 NKSKRVLTKAGLKTTGLDDDDD--DMRSTSTSESSSESSSSVEKAEDEVEVDDESRSRSG 302181 Query: 123 EEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSD 177 + ND++++ ++ TS DP+ A I+R P R + Sbjct: 302182 SDDNGNDNDNDNNSIHNSARRAYTSDNNADDVDPHMAHFDRIRRRTTKLPCRERE 302346 >scaffold_18 Length = 1144490 Score = 33.9 bits (76), Expect = 0.19 Identities = 20/99 (20%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Frame = +2 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDR-HDAAAREHEERLREQEEQKRMQKINDHDALK 138 DD+++ + + + RS ++R + + R ++R H R ++E++ +D D+ Sbjct: 330287 DDSDSDSDDDRKKRSKRKRKSRHRDEKRKRSKSSRRHRRSSRHRDEEEDDNSGSDSDSDS 330466 Query: 139 AGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSD 177 + + +SKK ++ P + S ++ K S+ +S+ Sbjct: 330467 SDAKRKSSSKKRRKERRPRRKESSSSRKRKSSRDSNNSN 330583 >scaffold_89 Length = 168682 Score = 33.5 bits (75), Expect = 0.25 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 4/147 (2%) Frame = -2 Query: 62 TNIEKSVKNLFGRRKTYYDDTENMTPEQVEA-RSVAMERARKKLQDRHDAAAREHEERLR 120 TN ++N RR D+T + E V + R A + AA+ ++ Sbjct: 117465 TNNNGDIRNFVSRRPRLVDETRMRSMENVRSSRHDIQGHANVTMMKNPPPAAKRRSQQEE 117286 Query: 121 EQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPL---RSSD 177 E ++ + K A + +++T +P P T+ ++++KP R Sbjct: 117285 EDDDVIEVYKDETAPPAPARRARTRTRTTTTTRPKPKVKTKRKRATSRKAKPRKGGRKRT 117106 Query: 178 FSPLGGGPSNSARWRPGNSRPSAGGXG 204 S G G + R G +AGG G Sbjct: 117105 ASTRGKGRGGNKFGRRGG---AAGGGG 117034 >scaffold_7 Length = 2770240 Score = 33.5 bits (75), Expect = 0.25 Identities = 25/94 (26%), Positives = 42/94 (44%) Frame = +1 Query: 84 NMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQ 143 N + +Q +S+ + + +L + EE E+++Q+ Q+ +GKT Sbjct: 106177 NQSIDQSINQSIMFRKMKNRLGGASATTDQVPEETKEEEQQQQPKQE-------GSGKTT 106335 Query: 144 SKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSD 177 + T KK K +PN K K+ KP SSD Sbjct: 106336 TTTKKKKSSKKEPNS------KLKKKEKPPISSD 106419 >scaffold_66 Length = 283846 Score = 33.1 bits (74), Expect = 0.33 Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Frame = +1 Query: 93 RSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQ 152 ++V + ++ QDRH R+H+++ +E+ ++K+ ++IND K + + Q Sbjct: 90595 QTVHLRLVAQQQQDRH---RRQHQQKQQEKLQRKKEEQIND----------IKLLELIQQ 90735 Query: 153 KPDPNQATQS-HIKRNKE 169 + D +Q TQ H++R ++ Sbjct: 90736 EQDRHQLTQQLHLQRQRQ 90789 >scaffold_25 Length = 923391 Score = 33.1 bits (74), Expect = 0.33 Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Frame = -1 Query: 93 RSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQ 152 ++V + ++ QDRH R+H+++ +E+ ++K+ ++IND K + + Q Sbjct: 772785 QTVHLRLVAQQQQDRH---RRQHQQKQQEKLQRKKEEQIND----------IKLLELIQQ 772645 Query: 153 KPDPNQATQS-HIKRNKESK 171 + D +Q TQ H++R ++ + Sbjct: 772644 EQDRHQLTQQLHLQRQQQQQ 772585 >scaffold_86 Length = 153064 Score = 32.7 bits (73), Expect = 0.43 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 2/123 (1%) Frame = +2 Query: 81 DTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAG 140 D +N + +R + + KK D H+ E+E + + +D D Sbjct: 83270 DDDNQNRVRRSSRKIG-DTNNKKTDDEHEDDDDENENENENETDTNNKGINDDEDDDDES 83446 Query: 141 KTQSKTSKKLDQKPDPNQATQSHIKRNKESKPL--RSSDFSPLGGGPSNSARWRPGNSRP 198 KTQ K KKL K + NQ T +++ +S S ++ +G S R+ +R Sbjct: 83447 KTQRKKIKKLPTKKNLNQPTLEAMEKYLKSGKFFDDSLEYEEVGAFASKIHRYTTERTRL 83626 Query: 199 SAG 201 G Sbjct: 83627 RRG 83635 >scaffold_13 Length = 1481013 Score = 32.7 bits (73), Expect = 0.43 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 1/98 (1%) Frame = -1 Query: 88 EQVEARSVAMERAR-KKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKT 146 EQ +A++V M + + K D +D A E+E+ + + ++ GK T Sbjct: 684069 EQYKAQAVGMLKPQLDKYVDDYDQTAGAGAGEDGEEEDVEEDSSSSSNNKPPQGKPSYLT 683890 Query: 147 SKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGG 184 SKK D + D + + ++ KP + P GGG Sbjct: 683889 SKKDDDEDDEAEDDAEKEEEEEDVKPTPAPTKKPSGGG 683776 Score = 28.9 bits (63), Expect = 6.2 Identities = 23/111 (20%), Positives = 42/111 (37%) Frame = -2 Query: 82 TENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGK 141 T T E R + RK D ++ +E N D Sbjct: 653642 TTTTTTTTTERRQKRRQERRKTAVTGADMSSVSSATATSIDDENNNKNNNNRSDESFVES 653463 Query: 142 TQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWR 192 + + + + D NQ+ + ++ ++S+ R +SP GGGP++S + R Sbjct: 653462 SSTTMPHQGGGRDDENQSRRRRQQQQQQSQQRRI--YSPFGGGPTSSTKRR 653316 >scaffold_2 Length = 3822992 Score = 32.3 bits (72), Expect = 0.56 Identities = 27/103 (26%), Positives = 40/103 (38%) Frame = +3 Query: 75 RKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDH 134 R+ D++ E+ R VA E AR++ AAA E R EEQ+ Q Sbjct: 392601 RRREIDESRRRAAEEEGRRRVAEEEARRR------AAAEEEARRRAAMEEQQLRQ----- 392747 Query: 135 DALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSD 177 +A +TQ + QK + H K ++ R D Sbjct: 392748 ---RAAQTQYAQQQAAWQKQQQQDDQRRHAAEQKSAEERRQRD 392867 Score = 32.0 bits (71), Expect = 0.74 Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +3 Query: 99 RARKKLQDRHDAAAREHEER-LREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPN 157 R K+ +D+ ++ EE+ LRE +++ + +K+ D L+ K ++K K D+K + Sbjct: 1326855 RDEKRAEDKKTKDNKKAEEKKLREDKKEAKKRKVEDEKKLRDNKKEAKKRKIEDEKKLQD 1327034 Query: 158 QATQSHIKRNKESKPLRSSD 177 ++ ++ + + R D Sbjct: 1327035 DKKEAKKRKIRAAAKKRMDD 1327094 Score = 29.6 bits (65), Expect = 3.7 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Frame = -3 Query: 100 ARKKLQDRHDAAAREHEERLREQEEQKRMQK--INDHDALKAGKTQSKTSKKLDQKPDPN 157 A K + +R D + E+E + + + + D D + + K+LDQ Sbjct: 3550548 ANKFISERFDLKGSTVGREVSEEELKSKGSQAVLKDLDLCREREVDDLVKKRLDQN---- 3550381 Query: 158 QATQSHIKRNKESKPLRSSDFSPLGGGPSNSARW 191 Q+ +++ K+ L+ S S GGG + +RW Sbjct: 3550380 ---QNQMQQQKQQLRLQFSSSSNSGGGGNIFSRW 3550288 >scaffold_37 Length = 579102 Score = 31.2 bits (69), Expect = 1.3 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 2/100 (2%) Frame = +1 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERL--REQEEQKRMQKINDHDAL 137 D+ EN + E+ S + +K D + + E L R +Q++ Q+ A+ Sbjct: 242533 DNEENDNQNENESESNSTNNDKKDESDNNSINTEDDELELLRRSPAQQQQQQQQQQQQAV 242712 Query: 138 KAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSD 177 K + KK P P + I+ + S SSD Sbjct: 242713 VVKKQKKIIKKKKKMSPPPPKKVVKKIQNSPRSTSTSSSD 242832 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = -3 Query: 80 DDTENMTPEQVEARSVAMERARKK------LQDRHDAAAREHEERLREQEE 124 D+ E E + + ER RK+ LQDRHD A+E + + + E Sbjct: 379837 DERERRKRADTEKKRITEERRRKRAEEEQLLQDRHDKLAKEKKTKTANRLE 379685 >scaffold_23 Length = 885465 Score = 31.2 bits (69), Expect = 1.3 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Frame = +3 Query: 88 EQVEARSVAMERARKKLQD----RHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQ 143 EQ EA + + ++ + R AAR ++R ++ ++ R + + DALK Sbjct: 358059 EQFEANQMLHQNRQEGTESILFRRLSFAARVLKKRKKKSTKKFRKKSSSPSDALKKS--S 358232 Query: 144 SKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWRPGNSRPSA 200 K+SKK +K P+ + S SKP S PS+S P S A Sbjct: 358233 KKSSKKFSKKSKPS-GSPSESPSESPSKPPSESPSGGPNSLPSSSPSKSPSESPSGA 358400 >scaffold_10 Length = 1906272 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +3 Query: 109 DAAAREHEERLRE-QEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRN 167 D EHEE+ + + K Q I HD K K K K + DPN+ +S ++ Sbjct: 158037 DFVEEEHEEKEGDVSKSNKNQQYIVPHDRKKLKKKLKKVKKLISTTDDPNE-LESLKQKK 158213 Query: 168 KESKPL 173 KE K + Sbjct: 158214 KEYKAM 158231 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = +1 Query: 93 RSVAMERARKKLQDRHDAAAREHEERLREQEE--QKRMQKINDHDALKAGKTQSKTSKKL 150 + +A++R ++ + + A + EER + QEE Q+ +Q + ++ K Q K Sbjct: 1024786 KGIAVKRKAEEAEKKRQEALQLAEERKQVQEEKRQEALQMAEERKEIQEQKQQEKLQVAE 1024965 Query: 151 DQKPDPNQATQSHIKRNKESKPLR 174 ++K Q Q ++ +E K ++ Sbjct: 1024966 ERKQIQEQKRQEALQVAEERKQIQ 1025037 Score = 29.6 bits (65), Expect = 3.7 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Frame = +1 Query: 96 AMERARKKLQDRHDAAAREHEERLREQ-----EEQKRMQK 130 A + ARKK+ D AAA EER E EEQ RM+K Sbjct: 1277626 AAKIARKKIADAVKAAAEAEEERKAEDSRIAGEEQTRMEK 1277745 >scaffold_4 Length = 3206981 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +1 Query: 109 DAAAREHEERLRE-QEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRN 167 D EHEE+ + + K Q I HD K K K K + DPN+ +S ++ Sbjct: 1074145 DFVEEEHEEKEGDVSKSNKNQQYIVPHDRKKLKKKLKKVKKLISTTDDPNE-LESLKQKK 1074321 Query: 168 KESKPL 173 KE K + Sbjct: 1074322 KEYKAM 1074339 Score = 30.8 bits (68), Expect = 1.6 Identities = 22/106 (20%), Positives = 52/106 (49%), Gaps = 14/106 (13%) Frame = +2 Query: 72 FGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEER----LREQEEQKR 127 + +++ +YD+ EQ + E+ + Q +H+ ++HE++ L++Q EQ++ Sbjct: 529778 YQQQEQHYDNNSQPQQEQYMQQQYLQEQYEQ--QQQHEQQQQQHEQQQQYELQQQYEQQQ 529951 Query: 128 MQKIND----------HDALKAGKTQSKTSKKLDQKPDPNQATQSH 163 +Q+ + H + + +QS+ S+ Q +Q+ QS+ Sbjct: 529952 LQQQYEQQQQQESQHYHGSYSSQISQSQYSQSQSQYSQQSQSQQSY 530089 Score = 29.6 bits (65), Expect = 3.7 Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Frame = +3 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEE--QKRMQKINDHDALKAGKTQSK 145 E + +A++R ++ + + A + EER + QEE Q+ +Q + ++ K Q K Sbjct: 1980096 EMRRQKGIAVKRKAEEAEMKRQEALQLAEERKQVQEEKRQEALQMAEERKEIQEQKQQEK 1980275 Query: 146 TSKKLDQKPDPNQATQSHIKRNKESKPLR 174 ++K Q Q ++ +E K ++ Sbjct: 1980276 LQVAEERKQIQEQKRQEALQVAEERKQIQ 1980362 Score = 28.9 bits (63), Expect = 6.2 Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 10/152 (6%) Frame = -3 Query: 63 NIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQ 122 +++ + K + R + D N + R VA+ R+R D+ + +E+LR Sbjct: 998892 DLQSAKKQVGERSSNFIDKIRNAAHK----RRVAVTRSR-------DSLVAKEQEQLRSI 998746 Query: 123 EEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRN----------KESKP 172 E K + + L+ +K + PN+ H K+N K K Sbjct: 998745 AESKTRSAASVMNDLQTVDENTKEVVDAKENGIPNRHQSKHTKKNSIGFGGVGVPKVDKR 998566 Query: 173 LRSSDFSPLGGGPSNSARWRPGNSRPSAGGXG 204 + SP+ G R G+S S GG G Sbjct: 998565 PTTMPLSPMLGSR------RKGDSAASFGGSG 998488 >scaffold_35 Length = 575126 Score = 30.8 bits (68), Expect = 1.6 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%) Frame = +1 Query: 88 EQVEARSV---AMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQS 144 E+VE R V A + +K+ Q + E + +LRE+EEQ++ D+ AG Sbjct: 241987 ERVEKRRVHKIAFKLQQKEEQQQAKEEEEEKQRQLREEEEQQQ-----DNTTTNAG---- 242139 Query: 145 KTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSP-LGGG 184 + S+ KR + P+ SS SP LGGG Sbjct: 242140 ---------------SSSNSKRKSKWSPIWSSSSSPGLGGG 242217 >scaffold_9 Length = 2734635 Score = 30.8 bits (68), Expect = 1.6 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Frame = -3 Query: 98 ERARKKLQDRHD--AAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTS----KKLD 151 E+ +K+ +D+ AAA+E E R + EQKR Q I + +A KT+ ++L Sbjct: 1915723 EQDQKQQEDKKASIAAAKEEAENARIEREQKR-QNIEEEKKARAAAISEKTNIERQQQLQ 1915547 Query: 152 QKPDPNQATQSHIKRNKESK 171 K + + + +++ K+ K Sbjct: 1915546 IKEEEEKGKAAEVEKLKQEK 1915487 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Frame = -2 Query: 89 QVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQK--RMQKINDHDALKAGKTQSKT 146 Q+ + MER R +DR++ +E E + E+ E++ RM++I + + + +T Sbjct: 2087522 QITTQFSEMERDRIMREDRNEMKRQERETKAEEKREERDARMEEIRLQTDTRMEEIRLET 2087343 Query: 147 SKKLDQ 152 K+ Q Sbjct: 2087342 ESKMKQ 2087325 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/74 (22%), Positives = 36/74 (48%) Frame = +3 Query: 101 RKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQAT 160 +++ Q +H ++H +Q +QK + L KT + TSK + ++P P ++ Sbjct: 800007 QQQQQQQHYYPHQQHRSHPSDQRDQKESPPSSK--LLTLTKTSTDTSKSILKQPKPPRSA 800180 Query: 161 QSHIKRNKESKPLR 174 K NK+ + ++ Sbjct: 800181 FMCFKDNKKKEVMK 800222 >scaffold_28 Length = 785617 Score = 30.0 bits (66), Expect = 2.8 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 15/137 (10%) Frame = +2 Query: 60 VWTNIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAA------- 112 ++ NI++S + G YD + AR R L D + +++ Sbjct: 640118 IYYNIQESCEQEGGPAFLRYDGHSYSVVGEPVARERITSAFRDCLSDCYKSSSKNKVAKR 640297 Query: 113 ------REHEERLREQEEQKRMQKINDHDALKAGKTQS--KTSKKLDQKPDPNQATQSHI 164 R +R +Q+EQ Q++N + + K KKL ++ N+ + Sbjct: 640298 RIANKKRTETDRKMQQKEQPPQQQVNPLSRIVVANEEKSGKEQKKLHKQEQVNKTFTRNN 640477 Query: 165 KRNKESKPLRSSDFSPL 181 + + L+S DF+P+ Sbjct: 640478 DKTRVCGALKSDDFAPV 640528 >scaffold_26 Length = 868567 Score = 30.0 bits (66), Expect = 2.8 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Frame = -3 Query: 65 EKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEE 124 ++ +KNL ++Y++D E+ ++ E ++ R +LQ A +HE+RL EQE Sbjct: 37328 QEQLKNL----QSYFEDQESHLRQRQEQLNLDESRVGAQLQK-----ATKHEQRLAEQEN 37176 Query: 125 Q--KRMQKINDHDALKAGKTQSKTSKKLD 151 + Q I L Q ++L+ Sbjct: 37175 NITSQQQSIEAQHVLMEQTVQELQQQRLE 37089 >scaffold_16 Length = 1295603 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 17/63 (26%) Frame = +1 Query: 130 KINDHDALKAGKTQSKTSK-----------------KLDQKPDPNQATQSHIKRNKESKP 172 K ++HD++ + K+ S+TSK +++ QAT H ++NKE + Sbjct: 755476 KRSEHDSVDSNKSDSETSKLQEIRS*IQSDSNDNESDIEKTATKRQATHHHHRQNKEQQQ 755655 Query: 173 LRS 175 +RS Sbjct: 755656 MRS 755664 >scaffold_3 Length = 3437899 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/99 (19%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Frame = -2 Query: 65 EKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMER---ARKKLQDRHDAAAREHEERLRE 121 ++ K RR+T ++ + Q++ ++ AM++ K L+ R + + ++ + Sbjct: 1566366 DELAKEALSRRQTQTEEANGLQ-SQLDGQADAMDKLYEGMKMLEKRISESKAQKDQMVAR 1566190 Query: 122 QEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQAT 160 + QK+ND + GKT ++++K + +A+ Sbjct: 1566189 ARTAQSTQKVNDMLSGVTGKTSMDAFTRMEEKVEQLEAS 1566073 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%) Frame = +3 Query: 113 REHEERLREQEEQKRMQKINDHDAL------KAGKTQSKTSKKLDQKPDPNQ 158 RE EER+R++EE K + D+D K K SK S +L Q+ + N+ Sbjct: 2736948 REREERIRDKEE*K*RNESEDYDKARSLYINKHYKCSSKLSYQLSQQRNLNK 2737103 >scaffold_1 Length = 5926375 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +2 Query: 66 KSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAR---EHEERLREQ 122 ++ + + RR+T + D + +Q R ++ ++K Q + + +H+ER REQ Sbjct: 5618846 RTTNSYYRRRRTRFCDVQQ*--QQEREREQLQDQQQQKQQQQQQQQQQ*Q*QHQEREREQ 5619019 Query: 123 EEQKRMQKI 131 + ++R +KI Sbjct: 5619020 KREQRSRKI 5619046 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Frame = +2 Query: 129 QKINDHDALK------AGKTQSKTSKKLDQKPDPNQATQSHIKRNK 168 +K++DHD + AGKT SKT+ K+ + D + K +K Sbjct: 1231706 KKVDDHDVISCISPTTAGKTASKTASKMREMDDSISVMEIESKEDK 1231843 Score = 28.5 bits (62), Expect = 8.1 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Frame = -2 Query: 89 QVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSK 148 Q+E V ER KL+ D R+H + + E EE R ++ + + LK K Q+ + Sbjct: 4145577 QIEMMQVETERLLCKLKAESDENERQHSKIIIELEESLR-ERESRLEVLKGEKGQTLHNL 4145401 Query: 149 KLDQKPDPNQATQSHIK-----RNKESK 171 + + K + + T K N ESK Sbjct: 4145400 EKESKGNETKHTDKTEKLQEALENVESK 4145317 >scaffold_30 Length = 728828 Score = 29.3 bits (64), Expect = 4.8 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = -2 Query: 120 REQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKES 170 ++Q+ Q + D + G + S +++ Q+P P T++H+K NKE+ Sbjct: 370960 QQQQLQMIRMLLEDQQQQRNGNSNSNPAEEQPQEP-PLSPTETHVKTNKEA 370811 >scaffold_11 Length = 1700871 Score = 29.3 bits (64), Expect = 4.8 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Frame = -2 Query: 98 ERARKKLQDRHD--AAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTS----KKLD 151 E+ +K+ +D+ AAA+E E R EQKR Q I + +A KT+ ++L Sbjct: 400772 EQDQKQQEDKKASIAAAKEEAENARIGREQKR-QNIEEEKKARAAAISEKTNIERQQQLQ 400596 Query: 152 QKPDPNQATQSHIKRNKESK 171 K + + + +++ K+ K Sbjct: 400595 IKEEEEKGKAAEVEKLKQEK 400536 >scaffold_81 Length = 180574 Score = 28.9 bits (63), Expect = 6.2 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = +3 Query: 63 NIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQ 122 N ++S + D + + +++++ + ++A KKLQD+ +E +E Sbjct: 35454 NAQRSSDREISELRKQIQDEKRDSIKRLQSEASLRKQAEKKLQDKEHNFDKERSHHEQET 35633 Query: 123 EEQKR--MQKINDHDALKAGKTQSKTS--KKLDQKPDPNQATQSHIKRNK 168 E K+ +I H K Q ++S K+LD + Q + + K Sbjct: 35634 SELKKQLQDEIQGHRDEKQAFLQEESSFHKQLDTEISRRQEAEELFHKGK 35783 >scaffold_63 Length = 289507 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/74 (22%), Positives = 36/74 (48%) Frame = +2 Query: 101 RKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQAT 160 +++ Q +H ++H +Q +QK + L KT + TSK + ++P P ++ Sbjct: 55559 QQQQQQQHYYPHQQHRSHPSDQRDQKESPPSSK--LLTLTKTSTDTSKSILKQPKPPRSA 55732 Query: 161 QSHIKRNKESKPLR 174 K NK+ + ++ Sbjct: 55733 FMCFKDNKKKEVMK 55774 >scaffold_40 Length = 507195 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = +1 Query: 119 LREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSS 176 LR+++++K+ ++ NDH + Q + L Q Q+TQS N E + +R++ Sbjct: 107158 LRKRKKEKKDEENNDHLTTEKSTQQKLRDRVLQQTEWIIQSTQSWNVANNERQKMRTT 107331 Database: F.cylindrus/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 80,540,407 Number of sequences in database: 271 Lambda K H 0.312 0.129 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,483,496 Number of Sequences: 271 Number of extensions: 165916 Number of successful extensions: 1037 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 58 Number of HSP's that attempted gapping in prelim test: 720 Number of HSP's gapped (non-prelim): 614 length of query: 204 length of database: 26,846,802 effective HSP length: 101 effective length of query: 103 effective length of database: 26,819,431 effective search space: 2762401393 effective search space used: 2762401393 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 61 (28.1 bits)