TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|298286511|ref|NP_001177244.1| selenoprotein S [Ciona intestinalis] (204 letters) Database: D.discoideum_AX4/genome.fa 6 sequences; 33,943,072 total letters Searching......done Score E Sequences producing significant alignments: (bits) Value gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromos... 37 0.010 gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromoso... 36 0.017 gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso... 36 0.023 gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromoso... 35 0.029 gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso... 35 0.029 gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromoso... 34 0.086 >gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromosome 2, whole genome shotgun sequence Length = 8484197 Score = 37.0 bits (84), Expect = 0.010 Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +3 Query: 66 KSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQ 125 K +K + + E EQ AR++ + ++K + +E EER REQ E+ Sbjct: 1739859 KELKEKEDKERKEQRQRERQEKEQERARALKEKIEKEKERLNQQKLDQEKEEREREQRER 1740038 Query: 126 KRMQKINDHD-ALKAGKTQSKTSKKLDQKPDP-NQATQSHIKRNKESK 171 K Q+ +++ L+ + + + +KL Q+ + + Q K+++E K Sbjct: 1740039 KEQQEREENEKQLEKEREEKERREKLKQRNEQLEKERQERFKKDQEEK 1740182 Score = 31.6 bits (70), Expect = 0.43 Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 5/109 (4%) Frame = +3 Query: 74 RRKTYYDDTENMTPEQVEARSVAMERAR-KKLQDRHDAAAREHEERLREQEEQKRMQKIN 132 R++ + E +++E + + E A K++ D AAA+ +ERL ++ E+KR I Sbjct: 1739454 RKRLEKEAEEKRIAQELEKKRLEKEAAEVKRIADEAAAAAKLEKERLEKEAEEKR---IA 1739624 Query: 133 DHDALKAGKTQSKTSKKL----DQKPDPNQATQSHIKRNKESKPLRSSD 177 D A A + + K+ +++ A ++ +++ + K R +D Sbjct: 1739625 DEAAAAAKLEKERLEKEAAAAEEKRIADEAAAEAKLEKERLEKEKRIAD 1739771 Score = 31.6 bits (70), Expect = 0.43 Identities = 22/89 (24%), Positives = 37/89 (41%) Frame = +3 Query: 79 YDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALK 138 YD+ + + E+ + + +E+ ++KLQ + D ++ ND + Sbjct: 4604823 YDNIDELLVEEEKIKRKELEQKKRKLQSQLDNDGLANKNDNNSNNNNYNNSNNNDSNNNN 4605002 Query: 139 AGKTQSKTSKKLDQKPDPNQATQSHIKRN 167 K SK KKL +K Q S IK N Sbjct: 4605003 TNKPLSKRQKKLLKK----QQNSSQIKEN 4605077 Score = 30.4 bits (67), Expect = 0.95 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Frame = -1 Query: 63 NIEKSVKNLF-GRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLRE 121 NI+ + N F G + + TEN E E++ + ++ ++ ++ E EE E Sbjct: 1403255 NIDDNFDNSFEGNDSSDQESTENEESEVEESQESDQQSISEESEEDEESEQEESEESEEE 1403076 Query: 122 QEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKE 169 E ++ DH+ +K + + Q+ Q TQ N+E Sbjct: 1403075 IPESFE-EREQDHNFIKQPPQSPQLQTQQQQQQQQQQQTQPQKHLNRE 1402935 Score = 30.0 bits (66), Expect = 1.2 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 1/106 (0%) Frame = +2 Query: 84 NMTPEQVEARSVAMERARKKLQDRHDAAAR-EHEERLREQEEQKRMQKINDHDALKAGKT 142 N T ++ + M + +KKL+ + AR E ER R+++++KR +K Sbjct: 5108660 NNTNDENNDNNNKMNKRQKKLKQLQELLARAEENERKRKEKKRKRKEK------------ 5108803 Query: 143 QSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNS 188 IK +K+S SSD GGG S+S Sbjct: 5108804 -------------------KKIKASKKSHHRHSSDSDSSGGGSSDS 5108884 Score = 29.6 bits (65), Expect = 1.6 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 14/109 (12%) Frame = -2 Query: 61 WTNIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLR 120 ++NI+K K L K + D +N + + RKK ++ + E E++ + Sbjct: 1907938 YSNIKKKKKEL----KKFLKDEKNKNKNK--------NKKRKKNKNDNSEDEDEDEDQYK 1907795 Query: 121 EQEEQ------------KRMQKINDHDALKAGK--TQSKTSKKLDQKPD 155 +QEE+ K+ + I ++D + A + K SK+ DQ D Sbjct: 1907794 DQEEEEYEDEDDDN*LKKKRKSIENYDEISASQEVVNKKVSKEKDQYED 1907648 Score = 29.3 bits (64), Expect = 2.1 Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 12/138 (8%) Frame = -3 Query: 54 FVAAMFVWTNIEKSVKN------------LFGRRKTYYDDTENMTPEQVEARSVAMERAR 101 F+A+ F N +KS K L + D T N + E + + Sbjct: 4822110 FIASAFHSPNKKKSSKKNKNLPDGLGELTLSPDSSDFEDTTTNDNDDHKEHKE---HKEH 4821940 Query: 102 KKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQ 161 K+ ++ D +EH+++ + ++++ K +H + K + D++ + Sbjct: 4821939 KEHKEHKDKEHKEHKDKEHKHKDKEHKDKDKEH--------KDKDKEHKDKEHKDKEHRH 4821784 Query: 162 SHIKRNKESKPLRSSDFS 179 HI+R+K + ++ DF+ Sbjct: 4821783 HHIRRHKNVELNKAVDFN 4821730 Score = 28.9 bits (63), Expect = 2.8 Identities = 13/61 (21%), Positives = 34/61 (55%) Frame = +2 Query: 114 EHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPL 173 + EER++ +EEQ+R ++ + L+ K + +KL ++ + + Q +++ ++ + Sbjct: 6302639 DQEERIKVKEEQERQEQ----EKLELAKKMQEEEEKLKEEQERIRLEQERVEKERQEEEK 6302806 Query: 174 R 174 R Sbjct: 6302807 R 6302809 Score = 28.5 bits (62), Expect = 3.6 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 16/99 (16%) Frame = +3 Query: 89 QVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSK 148 ++E + E K++ D AAA+ +ERL ++ ++I D A +A + + K Sbjct: 1739574 KLEKERLEKEAEEKRIADEAAAAAKLEKERLEKEAAAAEEKRIADEAAAEAKLEKERLEK 1739753 Query: 149 K---------------LDQKPDPNQATQSHI-KRNKESK 171 + L QK + + + I K NKE K Sbjct: 1739754 EKRIADEAAAEAAAALLQQKIEKEKEERDRIAKENKELK 1739870 Score = 28.5 bits (62), Expect = 3.6 Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 12/104 (11%) Frame = +2 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLRE-QEEQKRM--QKINDH-- 134 ++ E E++E M+ +KL++ + E E +E QEE+KRM ++I + Sbjct: 6302666 EEQERQEQEKLELAK-KMQEEEEKLKEEQERIRLEQERVEKERQEEEKRMELERIEEERL 6302842 Query: 135 DALKAGKT-------QSKTSKKLDQKPDPNQATQSHIKRNKESK 171 +A++ K + K ++ +K Q + IK+ +E K Sbjct: 6302843 EAIRIEKVRIEKEERERKEEEERKEKERKRQEEEERIKKEQEEK 6302974 Score = 27.7 bits (60), Expect = 6.1 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 25/130 (19%) Frame = +1 Query: 98 ERARKKLQDRHDAAAREHEERLREQEEQKRMQ------------KINDHDALKAG----- 140 ++ +KK QD+ + +E+ +E+E++K N + +G Sbjct: 4179736 QKKKKKQQDQKQQDKEKEKEKEKEKEKEKEKTISPTTTTTTTTTTANSNSLSNSGGGNSS 4179915 Query: 141 --------KTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNSARWR 192 TQS ++ + +PN T KR K+S +++ +N+ + R Sbjct: 4179916 KKLNESSDSTQSDSTNRTKPNANPNTNTSIRKKRKKKSGRGGNNN-----NNNNNNNQGR 4180080 Query: 193 PGNSRPSAGG 202 GNS + GG Sbjct: 4180081 GGNSNSNHGG 4180110 >gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromosome 4, whole genome shotgun sequence Length = 5450249 Score = 36.2 bits (82), Expect = 0.017 Identities = 26/118 (22%), Positives = 63/118 (53%), Gaps = 7/118 (5%) Frame = +3 Query: 64 IEKSVKNLFGRRKTYYD----DTENMTPEQVEARSVAM-ERARKKLQDRHDAAAREHEER 118 +++ VK + RRK ++ + + + ++ EA + + + A +KL+ +AAA E+ Sbjct: 2554233 MQEEVKRIEERRKAEHEKRLQEEQELRQKKEEAEKLRLAQEAMEKLRLEQEAAAAAEAEK 2554412 Query: 119 LREQEEQK--RMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLR 174 +R EEQ+ + +++ + + +K Q K ++ + K +A + +R ++++ LR Sbjct: 2554413 IRLAEEQRIIKEKEVAEQERIKQLTEQQKQKEEEEAKIALEKAKKEEAERLEKAEALR 2554586 Score = 33.9 bits (76), Expect = 0.086 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Frame = +1 Query: 98 ERARKKLQDRHDAAAREHEERL-REQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDP 156 ER R+K + ++ + +++L R+Q +KR + K KT++K L +K Sbjct: 4324327 ERKRRKRKKKNQKNQKNQKKKLKRKQRLKKRKMMVMRKKTKKKKKTKNKKKNNLKKKIQR 4324506 Query: 157 NQA---TQSHIKRNKESKP 172 NQ T IKR + +KP Sbjct: 4324507 NQKKNKTLMKIKRKRRNKP 4324563 Score = 33.1 bits (74), Expect = 0.15 Identities = 16/88 (18%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Frame = -3 Query: 87 PEQVEARSVAMERARKKLQD---RHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQ 143 P+Q V ++ KK QD + D ++ +++ +E E++K ++K + + K + + Sbjct: 1837473 PKQQIEEKVEEKKDEKKEQDKKEKEDEVMKDQQDKDKEVEKEKEVEKEKEKEKEKEKEKE 1837294 Query: 144 SKTSKKLDQKPDPNQATQSHIKRNKESK 171 + K+ +++ + + + +++ E+K Sbjct: 1837293 KEKEKEKEKEKEKEKEKEKEVEKEIETK 1837210 Score = 33.1 bits (74), Expect = 0.15 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 9/105 (8%) Frame = +3 Query: 82 TENMTPEQVEARSVAMERARKKLQDRH---DAAAREHEERLREQEEQKRMQKINDHDALK 138 T+ T E++E V E +KKL+ E +ERL+ QEE+++ ++ D + + Sbjct: 3817158 TKQPTVEEIEYERVQEEIKQKKLEREQRLKQQLEEEEKERLKRQEERQKRKEQRDKELKE 3817337 Query: 139 AG---KTQSKTSKKLDQKPD---PNQATQSHIKRNKESKPLRSSD 177 + + +T KKL ++ + + Q ++R+K K + D Sbjct: 3817338 EELRIEAERETRKKLKEERELQFKKEQVQLLLERDKRVKEKQLKD 3817472 Score = 32.3 bits (72), Expect = 0.25 Identities = 14/77 (18%), Positives = 39/77 (50%) Frame = -3 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTS 147 +Q+ + ++ +++ Q + ++ +++ ++Q++Q++ Q IN + G Q Sbjct: 5055540 QQLNHSGLIAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLINQQIGQQVGMIQQPHQ 5055361 Query: 148 KKLDQKPDPNQATQSHI 164 ++ Q+P Q +HI Sbjct: 5055360 LQIGQQPPTPQQHLAHI 5055310 Score = 27.7 bits (60), Expect = 6.1 Identities = 16/91 (17%), Positives = 42/91 (46%), Gaps = 16/91 (17%) Frame = +2 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDA-------LKAG 140 +Q +A+ ++ +++ Q +H ++ +++ ++Q++Q++ Q+ ++A Sbjct: 2347202 QQQQAQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQAQQQQQQAQQQAQVQAQ 2347381 Query: 141 KTQSKTSKKL---------DQKPDPNQATQS 162 + Q K + Q+P PN T S Sbjct: 2347382 QQQQKPTTATTASTVTTTPQQQPSPNNTTSS 2347474 Score = 27.3 bits (59), Expect = 8.0 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -2 Query: 143 QSKTSKKLDQKPDPNQATQSHIKRNKESKPL 173 QSKT+KK Q+P TQ K+ + SKP+ Sbjct: 5174299 QSKTNKKQQQQPTKQTTTQKK-KKEQPSKPV 5174210 >gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole genome shotgun sequence Length = 6357299 Score = 35.8 bits (81), Expect = 0.023 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%) Frame = -3 Query: 76 KTYYDDTENMTPEQVEA-RSVAMERARKKLQDRHDAAAREHEERLREQEEQK-RMQKIND 133 +T +D + + EQ E R ER +K+ ++R + E E + +E+EE+K R K+ Sbjct: 4722927 RTNKNDIKKLKEEQEEKERKEKQEREKKEQEEREEKERIEKERKEKEEEERKEREMKLEQ 4722748 Query: 134 HDALKAGKTQSKTSKKLDQKPDPNQA----TQSHIKRNKE-SKPLRSS 176 + K + +KL + Q Q H K NK+ +K L SS Sbjct: 4722747 EKKERELKLEQDRIQKLKDEIQLQQKLRSLNQKHSKANKQGTKDLDSS 4722604 Score = 33.5 bits (75), Expect = 0.11 Identities = 26/104 (25%), Positives = 42/104 (40%) Frame = +1 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKA 139 ++ + EQ E + VA E + KK D + H R ++ K+N + Sbjct: 2065453 EEKKKAASEQAEQKQVA-EDSDKKKADEAEIRPLSHPTLSRPSKKSSSSLKLNRVETESE 2065629 Query: 140 GKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSSDFSPLGG 183 + K ++KP+P + K E KP DF P+GG Sbjct: 2065630 VEASKSEETKEEEKPEPEEE-----KPKVEYKP----DFKPVGG 2065734 Score = 30.4 bits (67), Expect = 0.95 Identities = 15/77 (19%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Frame = -3 Query: 79 YDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERL-------REQEEQKRMQKI 131 Y D + + E R + + + +K L++ + ++HE+ L + Q++ +R+++ Sbjct: 2246754 YSDLDKLNKSNCEKRDITLGKEQKLLEELENKRMKKHEKDLIVNGLIEQHQQDDQRLKQA 2246575 Query: 132 NDHDALKAGKTQSKTSK 148 N + + +KT+K Sbjct: 2246574 NHYQNEQCKIILNKTNK 2246524 Score = 30.4 bits (67), Expect = 0.95 Identities = 15/86 (17%), Positives = 39/86 (45%) Frame = +1 Query: 84 NMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQ 143 N P V + A + Q + ++ +++ ++Q++Q++ Q+ + + Q Sbjct: 4779871 NNPPSPVTQFNQASPQHNNNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 4780050 Query: 144 SKTSKKLDQKPDPNQATQSHIKRNKE 169 + Q+P N ++I++NK+ Sbjct: 4780051 QQQQNGSPQQPHVNNNNNNNIQQNKD 4780128 Score = 30.4 bits (67), Expect = 0.95 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 3/91 (3%) Frame = -3 Query: 63 NIEKSVKNLF---GRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERL 119 N +K KNLF R+K E ++ ++ KK + + ++ +++ Sbjct: 1420941 NFKKKKKNLFIDYRRKKKKKKKKEKSNDTKIFLFI*RKKKKIKKKKKKKKKKKKKKKKKK 1420762 Query: 120 REQEEQKRMQKINDHDALKAGKTQSKTSKKL 150 ++++ +K+ +KINDH K K + +KKL Sbjct: 1420761 KKKK*KKKKKKINDHVIKKK*KKKINENKKL 1420669 Score = 29.6 bits (65), Expect = 1.6 Identities = 19/111 (17%), Positives = 49/111 (44%), Gaps = 1/111 (0%) Frame = +1 Query: 66 KSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQ 125 KS K+ T T N + ++ + E +++ Q + ++ +++ ++Q++Q Sbjct: 6301495 KSSKSSSSSSATTTTATTNTSSRAIKPTAKPNENKQQQQQQQQQQQQQQQQQQQQQQQQQ 6301674 Query: 126 -KRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRS 175 Q+IND + + S Q+ ++ + + +N +KP+ + Sbjct: 6301675 PNNQQRINDQTKSMYIQPSLQPSNNKQQQQKSVSSSTTTVSKNSLNKPIEN 6301827 Score = 28.5 bits (62), Expect = 3.6 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 9/49 (18%) Frame = -2 Query: 26 NENPYVMMSVFNQGLAFLQAYGWF---------LLFGFVAAMFVWTNIE 65 N + +FN G+ ++Y WF +L G A+F W N++ Sbjct: 537202 NSGSLTGLIIFNTGIGDKESYNWFEIIPFLLIGVLGGLGGALFTWINVK 537056 Score = 27.3 bits (59), Expect = 8.0 Identities = 11/39 (28%), Positives = 27/39 (69%) Frame = +3 Query: 113 REHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLD 151 ++ +++ ++++++K+ +KIN K K S+TSKK++ Sbjct: 1021920 KKKKKKKKKKKKKKKKKKINTKKKKKKKKIPSQTSKKIN 1022036 >gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromosome 6, whole genome shotgun sequence Length = 3602379 Score = 35.4 bits (80), Expect = 0.029 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Frame = +1 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEE-----QKRMQKINDHDALKAGKT 142 EQ E E+A KKL+ + E EE+ REQ E ++R +K+ + + + K Sbjct: 1774096 EQKEKEQKEKEKA-KKLKQQEQKEKEEKEEKEREQREKEQKDKEREKKLAEFEKQQKEKK 1774272 Query: 143 QSKTSKKLDQKPDPNQAT 160 Q + ++L KPD +T Sbjct: 1774273 QQQQVEELSSKPDDASST 1774326 Score = 33.1 bits (74), Expect = 0.15 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +2 Query: 126 KRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESK 171 K+M I + K KTQ KT KK +K DP + TQ + K K K Sbjct: 1158494 KKMTIIGKYLFKKKKKTQKKTQKKRPKKKDPKKKTQKNPKNPKLPK 1158631 Score = 27.7 bits (60), Expect = 6.1 Identities = 15/100 (15%), Positives = 44/100 (44%) Frame = +3 Query: 31 VMMSVFNQGLAFLQAYGWFLLFGFVAAMFVWTNIEKSVKNLFGRRKTYYDDTENMTPEQV 90 ++ S+F + F +F FGF +++W Y+ + E ++ Sbjct: 3032883 ILFSIFELVIIFWIFLDFFFFFGFFLFIYLWC--------------VYFKN*EERKEKRE 3033020 Query: 91 EARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQK 130 + + + +KK+ ++ ++++++++ +K+ QK Sbjct: 3033021 KKKKKEKKEKKKKMNGLKS*PTKQKKKKIKKKK*KKKKQK 3033140 >gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole genome shotgun sequence Length = 4923596 Score = 35.4 bits (80), Expect = 0.029 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 5/108 (4%) Frame = +3 Query: 74 RRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHD-----AAAREHEERLREQEEQKRM 128 R K +D E EQ EA +KLQ D A +E EER REQE Q+R Sbjct: 3445449 REKKEKNDREEK--EQREAEEKRQREKERKLQRERDEKELRAQQKEKEEREREQERQERE 3445622 Query: 129 QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSS 176 + + + + KK P+ +AT + ++ +S RSS Sbjct: 3445623 RLEAKRRVKEEKDRREREEKKKLISPNVKKATPATSAKSVKSTAHRSS 3445766 Score = 32.7 bits (73), Expect = 0.19 Identities = 20/71 (28%), Positives = 38/71 (53%) Frame = -2 Query: 83 ENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKT 142 E E+VEA VA E A+K +DR A ++RL E+E+ K++ + + + Sbjct: 2746003 EKKLTEEVEANRVAQEAAKKVEEDR---LAELEKKRLAEEEQTKKLAEEAAAKKAEDDRL 2745833 Query: 143 QSKTSKKLDQK 153 ++ +KK +++ Sbjct: 2745832 AAEAAKKAEEE 2745800 Score = 32.3 bits (72), Expect = 0.25 Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Frame = -2 Query: 80 DDTENMTPEQVEARSVAMERARK-KLQDRHDAAAREHEERLREQEEQKRMQKINDHDALK 138 ++ + + E++EA + A +A K +L+ AAA+ +ERL E+EE +R++K + L+ Sbjct: 2114410 EEADRLEKEKLEAEAAAATQAEKERLEAEAAAAAQAEKERL-EKEETERLEK----EKLE 2114246 Query: 139 AGKTQSKTSKKLDQKPDPNQATQSHIKR 166 A + ++K + + A Q+ +R Sbjct: 2114245 AEAAAAAQAEKEKLEAEAAAAAQAEKER 2114162 Score = 32.0 bits (71), Expect = 0.33 Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 88 EQVEARSVAMERARK-KLQDRHDAAAREHEERLREQEEQKRMQK 130 E++EA + A +A K KL+ +AAA+ +ERL E+EE +R++K Sbjct: 2113921 ERLEAEAAAAAQAEKEKLEAEAEAAAQAEKERL-EKEEAERLEK 2113793 Score = 32.0 bits (71), Expect = 0.33 Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +1 Query: 87 PEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKT 146 P+ ++++ + + K + +++ +++ ++Q++Q++ Q+ K+ QSK+ Sbjct: 3780103 PQPIQSQPTQPQPTQPK-SSKQQPQSKQQQQQQQQQQQQQQQQQQQQQQQQKSKPEQSKS 3780279 Query: 147 SKKLDQ-KPDPNQATQSHIK 165 + Q KP P Q QS K Sbjct: 3780280 KPEQSQSKPQPGQPLQSPSK 3780339 Score = 32.0 bits (71), Expect = 0.33 Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 5/96 (5%) Frame = +3 Query: 98 ERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLD-----Q 152 E+ RK+L+ R +E E+ ++ E+ + +K + + K + + + K+ D + Sbjct: 3898716 EKERKELEKREKKERKEKEKLDKKGEKGDKTEKDKEKEKEKEKEKEKEKEKEKDIKSGIE 3898895 Query: 153 KPDPNQATQSHIKRNKESKPLRSSDFSPLGGGPSNS 188 KP P T S + LR + + SNS Sbjct: 3898896 KPPPLSRTSSSFASKLKHATLRGGKVNDIDDTDSNS 3899003 Score = 31.6 bits (70), Expect = 0.43 Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Frame = -2 Query: 80 DDTENMTPEQVEARSVAMERARK-KLQDRHDAAAREHEERLREQEEQKRMQKINDHDALK 138 ++TE + E++EA + A +A K KL+ AAA+ +ERL + + +A Sbjct: 2114281 EETERLEKEKLEAEAAAAAQAEKEKLEAEAAAAAQAEKERLEAEAAAAAQAEKERLEAEA 2114102 Query: 139 AGKTQSKTSKKLDQKPDPNQATQSHIKRNKESK 171 A Q++ + + QA + +R ++ K Sbjct: 2114101 AAAAQAEKERLEAEAAAAAQAEKEEAERLEKEK 2114003 Score = 31.6 bits (70), Expect = 0.43 Identities = 16/43 (37%), Positives = 30/43 (69%) Frame = -2 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQK 130 E++EA + A + +++L+ AAA+ +ERL E+EE +R++K Sbjct: 2113705 EKLEAEAAAAQAEKERLEAEAAAAAQAEKERL-EKEETERLEK 2113580 Score = 31.2 bits (69), Expect = 0.56 Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 4/83 (4%) Frame = -1 Query: 74 RRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRM----Q 129 ++K D+ E ++ +S+ +E K+ Q+R + +EER + +EEQ+R+ + Sbjct: 4575509 KKKKRMDEERKKRLEDLKQQSLELE---KEAQERE----KRNEERKKAREEQQRLAAEQE 4575351 Query: 130 KINDHDALKAGKTQSKTSKKLDQ 152 K ++ + LK K + + KK ++ Sbjct: 4575350 KKDEEERLKKQKEREERRKKREE 4575282 Score = 31.2 bits (69), Expect = 0.56 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Frame = -2 Query: 83 ENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKAGK- 141 E PE V S E+ K+ ++ +AAA+ +ERL E+EE +R+ K + +K K Sbjct: 2114830 EESKPEPVVDDS--KEKEEKERLEKEEAAAKLEKERL-EKEEAERVAKEAEEKRIKDEKE 2114660 Query: 142 TQSKTSKKLDQKPDPNQATQSHIKRNKESK 171 Q K+ + QA + +++ + K Sbjct: 2114659 AQENLEKQQQEAAAAAQAEKERLEKEEADK 2114570 Score = 30.4 bits (67), Expect = 0.95 Identities = 13/43 (30%), Positives = 27/43 (62%) Frame = -2 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQ 122 ++TE + E++EA + A + +++L+ AAA+ +ERL + Sbjct: 2113603 EETERLEKERLEAEAAAAQAEKERLEAEAAAAAQAEKERLEAE 2113475 Score = 30.4 bits (67), Expect = 0.95 Identities = 15/76 (19%), Positives = 37/76 (48%) Frame = -3 Query: 74 RRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKIND 133 + K ++ E E+++ E+ KK + + ++ +++ EQE++ + +K + Sbjct: 355995 KEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEE 355816 Query: 134 HDALKAGKTQSKTSKK 149 K+ + S +SKK Sbjct: 355815 EKKSKSSSSSSSSSKK 355768 Score = 28.5 bits (62), Expect = 3.6 Identities = 12/43 (27%), Positives = 26/43 (60%) Frame = -2 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQ 122 ++ E + E++EA + A + +++L+ AAA+ +ERL + Sbjct: 2114032 EEAERLEKEKLEAEAAAAQAEKERLEAEAAAAAQAEKERLEAE 2113904 Score = 28.1 bits (61), Expect = 4.7 Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 8/90 (8%) Frame = -1 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKA-------- 139 +Q + + + ++ ++LQ + ++H+ ++ ++Q + Q++ H K Sbjct: 4536332 QQQQLQQLQQQQQLQQLQQQLQQQLQQHQN-MQTAQQQLQQQQLQQHQLQKQLPQHFHNI 4536156 Query: 140 GKTQSKTSKKLDQKPDPNQATQSHIKRNKE 169 + Q K + QKP+ N +I RNK+ Sbjct: 4536155 QQQQQKNQLQNTQKPNNNIQKNININRNKK 4536066 Score = 28.1 bits (61), Expect = 4.7 Identities = 13/50 (26%), Positives = 27/50 (54%) Frame = -3 Query: 81 DTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQK 130 D EN+ E+ S+ +++ + + +EH+E +EQE+Q+ +K Sbjct: 893700 DDENIGDSSTESESIDEHIKHHEIEKQQE---QEHQEHQQEQEQQQEQEK 893560 Score = 27.3 bits (59), Expect = 8.0 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 6/49 (12%) Frame = -2 Query: 88 EQVEARSVAMERARKKLQDRHDAAAREHEERLR------EQEEQKRMQK 130 E++EA + A +A K+ + AAA+ +ERL Q E++R++K Sbjct: 2113750 ERLEAEAAAAAQAEKEKLEAEAAAAQAEKERLEAEAAAAAQAEKERLEK 2113604 >gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromosome 5, whole genome shotgun sequence Length = 5125352 Score = 33.9 bits (76), Expect = 0.086 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 23 PLINENPYVMMSVFNQGLAFLQAYGWFLLFGFVAAMFVWTNIEKSVK 69 PLIN +P ++ +F F Y +F LF F+ V+TN + K Sbjct: 3923081 PLINNDPNKLLCIFIVLFLFYYYYYFFFLFNFLCCFIVYTNFYQKKK 3923221 Score = 33.5 bits (75), Expect = 0.11 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Frame = +2 Query: 63 NIEKSVKNLFGRRKTYYDD-TENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLRE 121 N KS+ + K D +++T E + MER K+ Q+R D + L+ Sbjct: 4171439 NTSKSILESMEQLKEIQDRLVKSLTDEVSKVNDFYMER-EKEAQERFDKLKIQVPLYLKS 4171615 Query: 122 QEEQKRM--QKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKES 170 +E+Q+R +++NDHD L + SKK ++ + N ++ N + Sbjct: 4171616 KEKQRRENEKELNDHDELLSYSESYHYSKKKNKLNNNNNNNNNNNNNNNNT 4171768 Score = 33.1 bits (74), Expect = 0.15 Identities = 25/123 (20%), Positives = 57/123 (46%), Gaps = 14/123 (11%) Frame = -1 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLREQEEQKRMQKINDHDALKA 139 + N + VE RS + +++ Q + ++ +++ ++Q++Q++ Q+ Sbjct: 2329934 EQVSNKSKINVEQRSFIQQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ--------- 2329782 Query: 140 GKTQSKTSKKLDQKPDPNQATQ--------------SHIKRNKESKPLRSSDFSPLGGGP 185 +Q K + Q+P P Q TQ + K+N ++ PL+S+ + + GG Sbjct: 2329781 --SQPKPVQP-QQQPQPQQQTQPQQQILQIQQQQRVNQNKKNNQTTPLKSNKQNIVYGGN 2329611 Query: 186 SNS 188 S++ Sbjct: 2329610 SDN 2329602 Score = 31.6 bits (70), Expect = 0.43 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +2 Query: 115 HEERLREQEEQKRMQKINDHDALKAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLR 174 + ++ ++Q++Q++ Q+ + K QSK K D Q Q K++KES ++ Sbjct: 4569770 NSQQQQQQQQQQKKQQQQQPKQPQQPKQQSKQQATQQDKKDKEQQQQQQDKQDKESNEIK 4569949 Query: 175 SS 176 S Sbjct: 4569950 GS 4569955 Score = 30.8 bits (68), Expect = 0.73 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%) Frame = -2 Query: 80 DDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEE--RLREQEEQKRMQKINDHDAL 137 D+ E E V E + L + + + E+ E+E Q+RM+ + + Sbjct: 2993365 DEKEKKKQETKSEEKVKSEPQKHLLPSQKNKLKKIKEKYGHQDEEERQERMEILGSAGSK 2993186 Query: 138 KAGKTQSKTSKKLDQKPDPNQATQSHIKRNKESKPLRSS 176 K K + K KK + + N ++ K NK+ KP+ S+ Sbjct: 2993185 KENKKKDKKGKKGGKSTNNN----NNNKDNKDKKPINSN 2993081 Score = 30.4 bits (67), Expect = 0.95 Identities = 24/128 (18%), Positives = 55/128 (42%), Gaps = 10/128 (7%) Frame = -1 Query: 62 TNIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLRE 121 TN++ V+ +RKT + E+ + S E ++ ++ + E EE E Sbjct: 5035847 TNLKPVVQTPKIQRKTSQIEEESDDDSSSQNNSSDQEEEEEEEEEEEEEEEEEEEEEEEE 5035668 Query: 122 QEEQKRMQKINDHDALKAGKTQSKTSKKLDQ----------KPDPNQATQSHIKRNKESK 171 +EE++ ++ + + + + + + ++ ++ KP P+ + S ES Sbjct: 5035667 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEVREAPKRSGGKPLPSPSLSSIFSNYDESS 5035488 Query: 172 PLRSSDFS 179 + SS+ S Sbjct: 5035487 SVASSESS 5035464 Score = 28.9 bits (63), Expect = 2.8 Identities = 12/70 (17%), Positives = 35/70 (50%) Frame = -2 Query: 62 TNIEKSVKNLFGRRKTYYDDTENMTPEQVEARSVAMERARKKLQDRHDAAAREHEERLRE 121 TN S+ + +YY EN P+Q + + + +++ Q + ++ +++ ++ Sbjct: 1560349 TNNGISINKIPKSHYSYYQTQENNKPQQSQQHPLLQHQQQQQQQQQQQQQQQQQQQQQQQ 1560170 Query: 122 QEEQKRMQKI 131 Q++ ++ +I Sbjct: 1560169 QQQPQQQPQI 1560140 Database: D.discoideum_AX4/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 33,943,072 Number of sequences in database: 6 Lambda K H 0.312 0.129 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,268,476 Number of Sequences: 6 Number of extensions: 58735 Number of successful extensions: 573 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 155 Number of HSP's gapped (non-prelim): 563 length of query: 204 length of database: 11,314,357 effective HSP length: 96 effective length of query: 108 effective length of database: 11,313,781 effective search space: 1221888348 effective search space used: 1221888348 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 58 (26.9 bits)