TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|168693663|ref|NP_001108229.1| selenoprotein S [Canis lupus familiaris] (190 letters) Database: D.fasciculatum/genome.fa 25 sequences; 31,019,208 total letters Searching.........................done Score E Sequences producing significant alignments: (bits) Value gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced ... 41 4e-04 gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced ... 35 0.024 gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced ... 35 0.041 gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced ... 35 0.041 gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced ... 34 0.070 gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced ... 33 0.091 gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced ... 31 0.45 gi|328867744|gb|GL883024.1| Dictyostelium fasciculatum unplaced ... 30 1.0 gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced ... 30 1.0 gi|328866208|gb|GL883028.1| Dictyostelium fasciculatum unplaced ... 29 1.7 gi|328866373|gb|GL883027.1| Dictyostelium fasciculatum unplaced ... 29 2.2 gi|328871053|gb|GL883014.1| Dictyostelium fasciculatum unplaced ... 28 2.9 gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced ... 28 5.0 gi|328867405|gb|GL883025.1| Dictyostelium fasciculatum unplaced ... 27 6.5 gi|328869808|gb|GL883018.1| Dictyostelium fasciculatum unplaced ... 27 8.5 >gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-o-80e12.f1-5, whole genome shotgun sequence Length = 2750715 Score = 41.2 bits (95), Expect = 4e-04 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 16/157 (10%) Frame = +1 Query: 50 KLSTRLRALRQRQLDRAEAAVEPDVVVKRQE----------ALAAARLKMQEELNAQVEK 99 K + + R ++Q+++D ++ ++ K++E A AAA KM +++ Q + Sbjct: 1764109 KKNIQERQVKQKEMDDRTIELQENIKNKQEESQKILKATAKAQAAALAKMSDQIKQQAIE 1764288 Query: 100 HKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLPKRKPDRKPL 159 +KL+QLEE + R EM QE + E + S S + + ++ Sbjct: 1764289 GHQKLKQLEESRNRHDAEMVRQHQEALG------RAMSEINSLQSMVSAKIQNEAIQQQQ 1764450 Query: 160 RGGGYNPL------SGEGGGACSWRPGRRGPSSGGXG 190 + YNP +G GGG C G+ G GG G Sbjct: 1764451 QQQHYNPNPHPSFGNGLGGGQCG--GGQLGGYQGGFG 1764555 Score = 29.3 bits (64), Expect = 1.7 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 11/118 (9%) Frame = +3 Query: 47 VFQKLSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKM----QEELNAQVEKHKE 102 V ++ RL+ L++R ++ +V D +L+++ + Q ELN Q EK KE Sbjct: 2322681 VLEQRRARLQQLKKRTTNK-RLSVYQDFQSHPSGSLSSSNIHPSTINQTELNQQQEKEKE 2322857 Query: 103 KLRQLEEQKRRQKIEMWDSMQEGKSY-------KGNARKHPEEDSPGPSTSSVLPKRK 153 K+ Q+E + + Q+G + K K EE STSS RK Sbjct: 2322858 KV-QVELDPNNNNNSLGEIKQKGVRFNDETVEIKEEMEKEKEEMEEEQSTSSSSSLRK 2323028 Score = 28.1 bits (61), Expect = 3.8 Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 6/71 (8%) Frame = +1 Query: 88 KMQEELNAQVEKHKEKLRQLEEQKRRQ--KIEMWDSMQEG---KSYKGNARKH-PEEDSP 141 K ++ N + + H ++ R+L++++R++ + D +E K ++ N RK + P Sbjct: 2158375 KKKQRSNQRPDAHPKRWRKLKKRRRKKWKRSSQQDQQEEDVQPKRWRKNQRKRWLRSNQP 2158554 Query: 142 GPSTSSVLPKR 152 P+ +V PKR Sbjct: 2158555 NPNHLNVHPKR 2158587 Score = 27.3 bits (59), Expect = 6.5 Identities = 14/53 (26%), Positives = 28/53 (52%) Frame = -1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYK 129 K+++ +K + ++ +EK KEK+R+ +K R++ +E KS K Sbjct: 1105734 KKKQVEMIKIMKKKNKVEEVIEKRKEKIRRKRIKKTRKRKRRKRKREERKSIK 1105576 Score = 27.3 bits (59), Expect = 6.5 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 2/30 (6%) Frame = +2 Query: 160 RGGGYNPLSGE--GGGACSWRPGRRGPSSG 187 RGGG P G GGGA S P RR P G Sbjct: 2004419 RGGGSPPRGGRGGGGGARSPSPMRRSPIRG 2004508 Score = 26.9 bits (58), Expect = 8.5 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 6/113 (5%) Frame = -1 Query: 51 LSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQ 110 + ++ + QR+ E + + K +E K +EE Q+++ E++R LEE+ Sbjct: 2745681 MEEEVKRIEQRRKQEEERRAKEEEERKVEETR-----KQEEERLKQLQEDMERVR-LEEE 2745520 Query: 111 KRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSV------LPKRKPDRK 157 ++++ +E QE + A +H E +T L K +RK Sbjct: 2745519 EKKRVLEEERKRQEEEDRLVAAAQHLAEQEKAAATKEAHDRQLRLAKEDEERK 2745361 Score = 26.9 bits (58), Expect = 8.5 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Frame = +2 Query: 160 RGGGYNPLSGEGGGAC-----SWRPGRRGPSSGGXG 190 RGGGY +G GGG +R G P GG G Sbjct: 2004347 RGGGYRGGNGGGGGRSPSPRGGYRRGGGSPPRGGRG 2004454 >gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-b-205a01.r1-3, whole genome shotgun sequence Length = 2485436 Score = 35.4 bits (80), Expect = 0.024 Identities = 23/90 (25%), Positives = 46/90 (51%) Frame = +3 Query: 68 AAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKS 127 AA + ++ KR++ A + K Q+ Q +K K++ +LEEQKR+Q+ + ++ ++ + Sbjct: 1994979 AAAQEEIDQKRKQEKADKKKKEQQLEQEQEQKRKQQEEELEEQKRKQQQQDLETKKK-EE 1995155 Query: 128 YKGNARKHPEEDSPGPSTSSVLPKRKPDRK 157 K ++ EE + + DRK Sbjct: 1995156 KKAEKKRQLEEQEEKEKEKERKRQDEADRK 1995245 Score = 32.0 bits (71), Expect = 0.26 Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = +1 Query: 54 RLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRR 113 +L R++Q + E + ++++ R + E L Q ++ +E+ RQLEEQ++R Sbjct: 59206 QLEEQRKKQKQQEEEEKQRLEELRKRMEEEEERKRQLEILKRQQQQKEEEQRQLEEQRKR 59385 Query: 114 Q--KIEMWDSMQEGKSYKGNARKHPEED 139 Q K ++ + ++ + K K +ED Sbjct: 59386 QQEKEKLEELKRQQQQQKEEEEKQRQED 59469 Score = 30.4 bits (67), Expect = 0.77 Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 5/88 (5%) Frame = -2 Query: 65 RAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMW----- 119 RA E VK+Q K EE+ A ++ +E+ +++E +K++ + EM Sbjct: 2473822 RAAPVEEESEEVKKQAEEVKKMEKKLEEMKAMKKQLEEEEKKMELEKKKAQDEMKKTKKA 2473643 Query: 120 DSMQEGKSYKGNARKHPEEDSPGPSTSS 147 + ++ K+ K+P ++ +TSS Sbjct: 2473642 EKAEKAKALAAELEKNPPKEKDTSTTSS 2473559 Score = 28.1 bits (61), Expect = 3.8 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%) Frame = +1 Query: 63 LDRAEAAVEPDVVVKRQEALAAARLKMQEELNA-QVEKHKEKLRQLEEQKRRQKIE 117 L + E + ++KRQ + + QEEL Q+E+ ++K +Q EE++ +Q++E Sbjct: 59104 LKQQEENKRQEEMIKRQRQQQQQQQQQQEELQRHQLEEQRKKQKQQEEEE-KQRLE 59268 Score = 27.3 bits (59), Expect = 6.5 Identities = 12/51 (23%), Positives = 29/51 (56%) Frame = +1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKS 127 K+Q+ + K QEE + ++ EKL+Q +E++ ++ + + +++ S Sbjct: 1085605 KQQQEEEEEKKKQQEEEERKKKEQLEKLKQQQEEEEEERKKQLEKLEQEHS 1085757 Score = 27.3 bits (59), Expect = 6.5 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +3 Query: 71 EPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLE---EQKRRQKIEMWDSMQEGKS 127 E D KR LAAA+ ++ ++ + K+K +QLE EQKR+Q+ E + + + Sbjct: 1994952 EEDAEKKR---LAAAQEEIDQKRKQEKADKKKKEQQLEQEQEQKRKQQEEELEEQKRKQQ 1995122 Query: 128 YKGNARKHPEE 138 + K EE Sbjct: 1995123 QQDLETKKKEE 1995155 Score = 26.9 bits (58), Expect = 8.5 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -3 Query: 133 RKHPEEDSPGPSTSSVLPKRKPDRK 157 ++ E++ P P+T PK+KP RK Sbjct: 356151 KERKEKNKPKPTTPKTRPKQKPKRK 356077 >gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_ET2XIPL01CNAVH-3, whole genome shotgun sequence Length = 1908399 Score = 34.7 bits (78), Expect = 0.041 Identities = 22/82 (26%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +3 Query: 60 QRQLDRAEAAVEPDVVVKRQ-EALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEM 118 ++ +AE A + ++ ++ Q E A + K EE +VE++ + R+ EE+KRR++ E Sbjct: 1350531 EKMKKKAEEANKRELELQAQREQEAKEKRKKMEERQKKVEENMQLQRE-EEEKRRREAED 1350707 Query: 119 WDSMQEGKSYKGNARKHPEEDS 140 ++ ++ K + R+ E+D+ Sbjct: 1350708 RETQRKAKEEQDRRRREEEDDA 1350773 Score = 32.3 bits (72), Expect = 0.20 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%) Frame = +2 Query: 59 RQRQL---DRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQK 115 +QR+L + A E + + K+++ LA +L+ +++ Q KE+LR LEEQKR Q+ Sbjct: 868379 KQRKLLDEKNKQMAKEKEELEKKKQQLAVEQLEYEKK-REQERLEKERLRVLEEQKRDQE 868555 Score = 29.6 bits (65), Expect = 1.3 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHP 136 K +E +L+ ++E AQ EK KEK ++ E++K +++ E S + + + Sbjct: 916151 KEKEKEKEKQLQEEKEKQAQEEKEKEKEKEKEKEKVQEETEDIQSSATAQQSQTFEIEEE 916330 Query: 137 EED 139 EED Sbjct: 916331 EED 916339 Score = 29.6 bits (65), Expect = 1.3 Identities = 14/59 (23%), Positives = 31/59 (52%) Frame = -3 Query: 54 RLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKR 112 R + +Q +R EAA + ++E A ++L +E+ + HK++L++ + +R Sbjct: 42376 RQEVFKAQQQERVEAAQRAKIEKAKKEREAISKLTPEEQRKRDEKDHKQQLKKRSKSQR 42200 Score = 29.3 bits (64), Expect = 1.7 Identities = 18/75 (24%), Positives = 33/75 (44%) Frame = +2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHP 136 K +E ++QEE Q ++ KEK ++ E++K + + E D + + + Sbjct: 916145 KEKEKEKEKEKQLQEEKEKQAQEEKEKEKEKEKEKEKVQEETEDIQSSATAQQSQTFEIE 916324 Query: 137 EEDSPGPSTSSVLPK 151 EE+ S V K Sbjct: 916325 EEEEDQHQKSFVADK 916369 Score = 26.9 bits (58), Expect = 8.5 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 Query: 97 VEKHKEKLRQLEEQKRRQKIEMWDSMQE 124 VEK ++++ +EQK+ KIEM D +E Sbjct: 1605907 VEKVDDEVQLTDEQKKNDKIEMSDKRKE 1605990 >gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-F-a-25c12.r2-5, whole genome shotgun sequence Length = 4166812 Score = 34.7 bits (78), Expect = 0.041 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Frame = -3 Query: 94 NAQVEKHKEKLRQLEEQKRRQKIEMW-DSMQEGKSYKGNARKHPE--EDSPGPSTSSVLP 150 N +++K K+KL++ +EQK+RQK + + D Q+ N+ + E D P +++ Sbjct: 3367571 NTKIDKKKQKLQKKKEQKKRQKQKKYQDKQQQQNGSHSNSSNNVEIDGDEPPAPVDNMMI 3367392 Query: 151 KRKPD 155 + PD Sbjct: 3367391 EEDPD 3367377 Score = 30.4 bits (67), Expect = 0.77 Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 10/84 (11%) Frame = +3 Query: 86 RLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHP------EED 139 +L+ Q++ Q+++ K++ Q E+Q ++Q+++ +Q+ + + ++H E++ Sbjct: 3684867 QLQQQQQQQEQLQREKQQQLQREKQLQQQQLQREKQLQQQEQTQREKQQHQQLVEQQEQE 3685046 Query: 140 SPGPST----SSVLPKRKPDRKPL 159 T S +LPK K +PL Sbjct: 3685047 ENNQQTQNRNSLLLPKNKSLLRPL 3685118 Score = 28.5 bits (62), Expect = 2.9 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%) Frame = -2 Query: 89 MQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEG--KSYKGNARKHPEEDSPGPSTS 146 MQEE A + +L+ +K +QK + S + K + +K P +P P + Sbjct: 3045291 MQEERFALSLDDNIESEELDLKKMKQKKPLKKSKDKPMKKQQEEEKKKKPMAPAPAPVVA 3045112 Query: 147 SVLPKRKPDRKPLRGGGYNP----LSGEGGG 173 S PK P P G G P + G GGG Sbjct: 3045111 S--PKGAPPPPPPGGRGEPPPPPAVGGGGGG 3045025 Score = 28.5 bits (62), Expect = 2.9 Identities = 12/33 (36%), Positives = 24/33 (72%) Frame = -3 Query: 83 AAARLKMQEELNAQVEKHKEKLRQLEEQKRRQK 115 AAA++K ++ + EK KEK ++ +++KR++K Sbjct: 1720247 AAAKIKRKKRKKKRNEKKKEKRKRKKKEKRKRK 1720149 Score = 28.1 bits (61), Expect = 3.8 Identities = 26/116 (22%), Positives = 56/116 (48%) Frame = +2 Query: 19 LRYLHVTVGSLLATYGWYIVFSCILLYVVFQKLSTRLRALRQRQLDRAEAAVEPDVVVKR 78 LR L V + ++ + I+ ++ ++ +K + +++++ E E + V K Sbjct: 1523840 LRQLLVLLIIIVTRFINIIIIIITIIMIMKRKKRIKKEKRKKKEIVEKEKGKEKEKVEKE 1524019 Query: 79 QEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARK 134 + R K +E+ +VEK KEK E++K+++K+E +E + K +K Sbjct: 1524020 KR-----REKKKEK--EKVEKEKEK----EKKKKKEKVEREKVKKEKRREKRKKKK 1524154 Score = 27.7 bits (60), Expect = 5.0 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGK 126 +RQE Q+ N E+ + +R LEE++++QK Q G+ Sbjct: 140015 QRQEEDEVLAQHQQDSYNRLQERQQAAMRDLEEEQKKQKAHFESECQLGE 140164 Score = 26.9 bits (58), Expect = 8.5 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = +1 Query: 88 KMQEELNAQVEKHKEKLRQLEEQKRRQKIEM 118 KM E + ++ KHK++ Q+ E ++ K+E+ Sbjct: 2313871 KMNLEKDNEITKHKQEFVQIAENNQKLKVEL 2313963 >gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EU5ZYIE02H8LDV-5, whole genome shotgun sequence Length = 1919465 Score = 33.9 bits (76), Expect = 0.070 Identities = 31/124 (25%), Positives = 51/124 (41%) Frame = +2 Query: 49 QKLSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLE 108 Q+ R ++R +R A + V+ AAA + Q+E Q E+ KEK R + Sbjct: 827078 QRKEREQREQQERDAERERVAEKERVIAAASATAAAAAIAQQKE-KEQEEQEKEKERVQK 827254 Query: 109 EQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLPKRKPDRKPLRGGGYNPLS 168 EQ+++Q+ E QE + K K + + L K + +K P+S Sbjct: 827255 EQQQQQQQE-----QEQEKEKERLEKEQQLEKERLVEKERLEKLEAAKKEEVAAAVAPVS 827419 Query: 169 GEGG 172 G Sbjct: 827420 PPSG 827431 Score = 30.0 bits (66), Expect = 1.0 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%) Frame = -3 Query: 110 QKRRQKIEMWDSMQEGKSYKGN---ARKHPEEDSPGPSTSSVLPKRKPDRKPLRGGGYNP 166 ++ R+ E W + E +G AR+ T+ +L R +R PL G + Sbjct: 1446435 RRHRRPFESW--LGEADGLRGRHLLARREGTSLGGRRGTAPLLAGRGEERVPLLAGWSSW 1446262 Query: 167 LSGEGGGACSWRPGRRG 183 GEGG A SW GR G Sbjct: 1446261 PGGEGG-AISWLGGREG 1446214 Score = 30.0 bits (66), Expect = 1.0 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 11/104 (10%) Frame = +2 Query: 56 RALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQV-----EKHKEKLR-QLEE 109 R + + +L++ EAA ++E +AAA + A + E +E++R +LEE Sbjct: 827339 RLVEKERLEKLEAA--------KKEEVAAAVAPVSPPSGADIRRTEREMERERIRLELEE 827494 Query: 110 Q-----KRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSV 148 Q KRR++ E ++ + N P SP S SSV Sbjct: 827495 QERELEKRRKEREERKKKEQEERENKNKTPTPTSSSPASSPSSV 827626 Score = 29.6 bits (65), Expect = 1.3 Identities = 16/30 (53%), Positives = 16/30 (53%) Frame = +2 Query: 161 GGGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 GGGY G GGG R G RG S GG G Sbjct: 1549316 GGGYG--GGRGGGFGGGRGGGRGGSRGGFG 1549399 Score = 26.9 bits (58), Expect = 8.5 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = +2 Query: 65 RAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQK-RRQKIEMWDSMQ 123 R + +P++ KR E K + E Q+E+ + R+LEE++ +R+K E++ Q Sbjct: 826658 RKQVGPDPELAKKRAE-----EEKERAERRKQIEEEARQRRRLEEEEDKRKKDEIYRFRQ 826822 Query: 124 EGKSYKGNA 132 G++ Sbjct: 826823 LNSGIAGSS 826849 >gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-p-12c09.r1-3, whole genome shotgun sequence Length = 1770755 Score = 33.5 bits (75), Expect = 0.091 Identities = 23/91 (25%), Positives = 48/91 (52%) Frame = -2 Query: 59 RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEM 118 +QR+ ++ E + R++ RLK +++ + ++EK KEK R+ E Q +++++ Sbjct: 300403 KQREAEKTRLKEEEE----RRKEDEKKRLKEEKKRSKELEKEKEKQREQEIQTIKEQVK- 300239 Query: 119 WDSMQEGKSYKGNARKHPEEDSPGPSTSSVL 149 + ++ K K +K E STSS++ Sbjct: 300238 -ELKRKQKELKKQQKKDGESTHSHDSTSSMM 300149 Score = 28.9 bits (63), Expect = 2.2 Identities = 24/90 (26%), Positives = 44/90 (48%) Frame = -2 Query: 65 RAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQE 124 + E AV K + L+ +R M ++ ++EK KEK ++ +EQK +++ E + +E Sbjct: 170821 KIETAVLSITGRKGKGGLSHSRSSMS--IDQEIEKEKEKEKEQKEQKEKEEKEKEEKEKE 170648 Query: 125 GKSYKGNARKHPEEDSPGPSTSSVLPKRKP 154 K K P D + ++PK+ P Sbjct: 170647 EK------EKEPAFDRK-QNPMRIVPKQLP 170579 Score = 27.3 bits (59), Expect = 6.5 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = -2 Query: 160 RGGGYNPLSGEGGGACSWRPGRRGPSSGG 188 RGGG G GGG R G RG GG Sbjct: 179344 RGGGGRGGGGRGGGGGRGRGGGRGRGRGG 179258 >gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EUAJFUG02HR96I-5, whole genome shotgun sequence Length = 3408800 Score = 31.2 bits (69), Expect = 0.45 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -2 Query: 84 AARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNA 132 A + K EEL Q+++ +++ +LEE+ +R K E+ S NA Sbjct: 1282096 AKKTKFVEELEDQLKEANDRINRLEEENKRLKYEIHRPSSSSNSNSNNA 1281950 Score = 30.0 bits (66), Expect = 1.0 Identities = 25/107 (23%), Positives = 51/107 (47%) Frame = +3 Query: 54 RLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRR 113 R++ LRQR+ ++ + +P + QE +K+ + + + E+ KE Q E+ Sbjct: 2198367 RIKDLRQRESEKKKNQPKPQ---QDQE------MKVDQVVEEKEEEKKEVEGQQEDSDDE 2198519 Query: 114 QKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLPKRKPDRKPLR 160 E D +E + K + E + P+T++V+P + +KP + Sbjct: 2198520 SDEEEEDEEEEEEEKKESM---DIEKTTTPTTTAVIPSKPKKKKPTK 2198651 Score = 28.1 bits (61), Expect = 3.8 Identities = 11/39 (28%), Positives = 25/39 (64%) Frame = +3 Query: 100 HKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEE 138 +K+K + +EQK +Q+ E W++ + S + + ++H +E Sbjct: 2296818 NKKKRQVNKEQKEQQQQEKWNTTTQSSSIEQSRQQHQQE 2296934 Score = 27.7 bits (60), Expect = 5.0 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -3 Query: 133 RKHPEEDSPGPSTSSVLPKRKPDRKPLRGGGY--NPLSGEGGGACSWRPGRRGPSSGGXG 190 R P + GP TS+ +P + GGG P+ G GGG + P GG G Sbjct: 1422591 RSMPARSTNGPITSAGSTITRPQPMNMGGGGMGGQPMMGGGGGM------NQQPMMGGGG 1422430 Score = 27.3 bits (59), Expect = 6.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = -2 Query: 125 GKSYKGNARKHPEEDSPGPSTSSVLP--KRKPDRKPLR 160 GKS + P + S STS LP + KP+RK ++ Sbjct: 419284 GKSSTSTSSASPSKSSSSSSTSQTLPSLRMKPERKSIK 419171 Score = 26.9 bits (58), Expect = 8.5 Identities = 15/83 (18%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Frame = +1 Query: 49 QKLSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEK----- 103 +K TR+ + + ++ + + VV+K ++ +++ ++EK KEK Sbjct: 2209888 EKEVTRIAVIEEIEIKKRVIRIVVVVVIKGIRIETEKEIEREKKRKIEIEKEKEKRVVLL 2210067 Query: 104 -------LRQLEEQKRRQKIEMW 119 + + E++++R++I +W Sbjct: 2210068 LVVQPRIVIEKEKKRKRKRINIW 2210136 Score = 26.9 bits (58), Expect = 8.5 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = +1 Query: 161 GGGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 GGG P G GGGA PG G GG G Sbjct: 2344456 GGGGGPPPGGGGGA---PPGGGGGGGGGGG 2344536 >gi|328867744|gb|GL883024.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EU5ZYIE01DZOHE-5, whole genome shotgun sequence Length = 761004 Score = 30.0 bits (66), Expect = 1.0 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Frame = +3 Query: 57 ALRQRQLDRAEA-----AVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQK 111 A R Q RAEA AVE +K+Q EE+NA++E K + +++EE++ Sbjct: 307119 ARRMLQQLRAEAKSLSRAVEEQNKLKKQ----------AEEMNARLEAEKLEKQRMEEER 307268 Query: 112 RRQKIEMWDSMQEGKSYKGNARKHPEED 139 ++ M + ++ + K K +E+ Sbjct: 307269 QQTAKRMQEEKEQAELEKQEIAKRMQEE 307352 >gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_ET2XIPL01COFD4-5, whole genome shotgun sequence Length = 3468650 Score = 30.0 bits (66), Expect = 1.0 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEM 118 K EALA + +Q E +A V K KL + E + +QK+++ Sbjct: 660293 KSHEALADVKKTLQTEFDAFVNNPKVKLEKKERENLQQKVDV 660418 Score = 28.9 bits (63), Expect = 2.2 Identities = 14/28 (50%), Positives = 14/28 (50%) Frame = -1 Query: 161 GGGYNPLSGEGGGACSWRPGRRGPSSGG 188 GGG PL G GGG PG G GG Sbjct: 807293 GGGGGPLPGGGGGGGGPPPGGGGGGGGG 807210 Score = 28.5 bits (62), Expect = 2.9 Identities = 20/52 (38%), Positives = 27/52 (51%) Frame = +2 Query: 68 AAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMW 119 A V P V K E L R +EE + EK +E++R KRR+K+E W Sbjct: 2464955 AVVLPVVPPKDPEQLERER---EEERKREQEKLEEEMR-----KRREKVEQW 2465086 Score = 28.5 bits (62), Expect = 2.9 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -1 Query: 161 GGGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 GGGYN + GGG + PGR G G G Sbjct: 332828 GGGYN--NNNGGGEGGFHPGRSGSFRGRGG 332745 Score = 28.1 bits (61), Expect = 3.8 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -2 Query: 97 VEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEED 139 +EK KEK R ++ K Q+ E D +E KG+ EED Sbjct: 1602571 IEKKKEKERLAKQDKEEQENEEEDDEEEEDDEKGDDIIDEEED 1602443 Score = 27.7 bits (60), Expect = 5.0 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = +1 Query: 91 EELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDS 140 E+ +EK KEK Q +++K+++K + + +QE K + EE+S Sbjct: 1751071 EKYKDNIEKQKEKQEQTKKKKKKEKEK--EKVQEQGVEKEEEEEEEEEES 1751214 Score = 27.7 bits (60), Expect = 5.0 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +3 Query: 60 QRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKH-KEKLRQLEEQKRRQKIE 117 + Q A VE K+ A AAA ++ + VE+ KEK ++L E+++++K+E Sbjct: 2453925 EEQTTTTGAVVEVKKEDKKAAAAAAASYVVEVKKETVVEEDPKEKRKRLAEEEKQRKVE 2454101 Score = 26.9 bits (58), Expect = 8.5 Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 3/62 (4%) Frame = -1 Query: 77 KRQEALAAARLKMQEELNAQVEK---HKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNAR 133 +++E AAA EE ++ + HK+ R+ +E+++ ++ E D ++E K + + Sbjct: 3423158 EKKELAAAAAAAAAEEKGSKSKSSRHHKKDSRKEKEREKEEEQEEEDVVEEETEKKHHKK 3422979 Query: 134 KH 135 KH Sbjct: 3422978 KH 3422973 Score = 26.9 bits (58), Expect = 8.5 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Frame = +1 Query: 124 EGKSYKGNARKHPEEDSP--GPSTSSVLPKRKPDRKPLRGGGYN-PLSG---EGGGACSW 177 +G Y G ++ SP GP +P P P + GGY P G +GG Sbjct: 387658 QGGGYGGPQQQGGPVPSPQGGPQQGGPVPS--PQGGPQQQGGYGGPQQGYGQQGGYGGPQ 387831 Query: 178 RPGRRGPSSGGXG 190 + G GP GG G Sbjct: 387832 QGGYGGPQQGGYG 387870 Score = 26.9 bits (58), Expect = 8.5 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = +2 Query: 88 KMQEELNAQVEKHKEKLRQLEEQKRR 113 K+ +EL A E+HK +L Q++E+KRR Sbjct: 876392 KVYQELVA-TEEHKRELLQIQEEKRR 876466 Score = 26.9 bits (58), Expect = 8.5 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -1 Query: 161 GGGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 GGG P+ G GGG PG P GG G Sbjct: 807359 GGGGPPMPGGGGG-----PGGPPPGGGGGG 807285 >gi|328866208|gb|GL883028.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EUAJFUG02G6ADK-5, whole genome shotgun sequence Length = 378254 Score = 29.3 bits (64), Expect = 1.7 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Frame = +1 Query: 104 LRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLPKRKP---DRKPLR 160 L EE R + + + +G + S S+SS+ R DR+P Sbjct: 342283 LHPWEEYDRYIQADPYPPSSSSSERRGREHRRSSSSSSSSSSSSLSSSRDRTPYDRRPPP 342462 Query: 161 GGGYNPLS-GEGGGACSWRPGRRGPSSG 187 GY+ S G GGG G G +SG Sbjct: 342463 QSGYDRYSYGSGGGGGGGGGGSGGGNSG 342546 >gi|328866373|gb|GL883027.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EUAJFUG01CK1KI-5, whole genome shotgun sequence Length = 542435 Score = 28.9 bits (63), Expect = 2.2 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 7/65 (10%) Frame = -1 Query: 58 LRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEE-------LNAQVEKHKEKLRQLEEQ 110 L +R L + ++ +++++ L A R K+QEE L + +K KEK +QLE++ Sbjct: 453134 LARRNLGLLDTEMKKKQKLEQEQKLEAER-KLQEENRKKQQLLLEEEKKRKEKEKQLEKE 452958 Query: 111 KRRQK 115 + ++K Sbjct: 452957 REKEK 452943 >gi|328871053|gb|GL883014.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-F-a-11f03.f1-5, whole genome shotgun sequence Length = 911335 Score = 28.5 bits (62), Expect = 2.9 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1 Query: 10 ARPALETEGLRYLHVTVGSLLATYGWYIVFS-CILLYV 46 ARP L+ RY V S+ + W IVFS C+ LY+ Sbjct: 41758 ARPLLDFANTRYCLRAVPSVKISVVWVIVFSLCLSLYI 41871 Score = 28.1 bits (61), Expect = 3.8 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -1 Query: 59 RQRQL-DRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQ 114 R+R++ D++ E VVV+ +E + ++E + EK KEK + E++K ++ Sbjct: 676501 REREIIDKSPKPSEKQVVVQEKENNTPIVQEKEKEKEKEKEKEKEKEPEKEKEKEKE 676331 >gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-o-33e01.r1-3, whole genome shotgun sequence Length = 1429294 Score = 27.7 bits (60), Expect = 5.0 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Frame = -3 Query: 49 QKLSTRLRALRQR----QLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKL 104 +++ T R R+R Q + E +V + ++ AR+ +E Q E+ K++ Sbjct: 473108 ERIETEERIERERVERVQREEEEKKRREEVEEQEKKRQEDARIAQEERKRVQEEERKKRE 472929 Query: 105 RQLEEQKR--RQKIEMWDSMQEGKSYKGNARKHPEE 138 Q EEQ+R R++ E QE + + N++ +E Sbjct: 472928 EQ-EEQERQIREEEEEKRRQQEEEEEENNSQDDQQE 472824 Score = 27.7 bits (60), Expect = 5.0 Identities = 14/51 (27%), Positives = 29/51 (56%) Frame = +1 Query: 67 EAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIE 117 +AA +V + + +K Q++ QVEK KEK ++ E++K ++ ++ Sbjct: 1428289 QAASSSNVPLNAIPTTSNNAVKHQQQQENQVEKEKEKEKEKEKEKPKEVVK 1428441 >gi|328867405|gb|GL883025.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EU5ZYIE01EUG8B-5, whole genome shotgun sequence Length = 941765 Score = 27.3 bits (59), Expect = 6.5 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -3 Query: 161 GGGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 G GY G GG+ + G G SSGG G Sbjct: 515199 GSGYGGSGGGYGGSSGYSSGGYGGSSGGYG 515110 >gi|328869808|gb|GL883018.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-b-285a01.f1-5, whole genome shotgun sequence Length = 1327167 Score = 26.9 bits (58), Expect = 8.5 Identities = 10/36 (27%), Positives = 22/36 (61%) Frame = -2 Query: 20 RYLHVTVGSLLATYGWYIVFSCILLYVVFQKLSTRL 55 R + + + +L Y +Y+ F C L+Y++ Q+ +R+ Sbjct: 624209 RCMSIVLLLVLVYYCFYLSFCCQLIYIILQQFYSRV 624102 Database: D.fasciculatum/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 31,019,208 Number of sequences in database: 25 Lambda K H 0.314 0.132 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,276,896 Number of Sequences: 25 Number of extensions: 65411 Number of successful extensions: 646 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 311 Number of HSP's gapped (non-prelim): 535 length of query: 190 length of database: 10,339,736 effective HSP length: 94 effective length of query: 96 effective length of database: 10,337,386 effective search space: 992389056 effective search space used: 992389056 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 57 (26.6 bits)