TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|168693663|ref|NP_001108229.1| selenoprotein S [Canis lupus familiaris] (190 letters) Database: D.discoideum_AX4/genome.fa 6 sequences; 33,943,072 total letters Searching......done Score E Sequences producing significant alignments: (bits) Value gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso... 35 0.026 gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromos... 34 0.075 gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromoso... 33 0.13 gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso... 33 0.13 gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromoso... 32 0.22 gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromoso... 31 0.49 >gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole genome shotgun sequence Length = 6357299 Score = 35.4 bits (80), Expect = 0.026 Identities = 18/72 (25%), Positives = 40/72 (55%) Frame = -2 Query: 71 EPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKG 130 EP+V ++ E +++ + Q+E Q +K KEK ++ E++K ++K + + +E + K Sbjct: 2078185 EPEVDEQKVEEKKSSKKRKQKEKQKQRQKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 2078006 Query: 131 NARKHPEEDSPG 142 ++ +E G Sbjct: 2078005 KEKEKEKEKGKG 2077970 Score = 34.7 bits (78), Expect = 0.044 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 14/110 (12%) Frame = +1 Query: 59 RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKH------KEKLRQLEEQKR 112 + +Q + + +P K ++ ++ Q++ Q+EK KEK ++ E++K Sbjct: 5099728 KPKQEKKPKQEKKPKQEKKSKQIQEVQEIQQQQQPQQQLEKEENKLEEKEKEKEKEKEKE 5099907 Query: 113 RQKIEMWDSMQEGKSYKGNARKHPEEDSP--------GPSTSSVLPKRKP 154 ++K + + +E S K ++ E D P P+TSS K KP Sbjct: 5099908 KEKEKEEEGEEEDNSKKKKKKQKIEPDQPIKNSIPKKPPTTSSRKSKNKP 5100057 Score = 33.1 bits (74), Expect = 0.13 Identities = 17/65 (26%), Positives = 37/65 (56%) Frame = -3 Query: 90 QEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVL 149 Q+E+ ++EK KEK ++ E++K ++K + ++ +E + K N ++ + S+L Sbjct: 3816156 QKEIEIEIEKEKEKEKEKEKEKEKEKEK--ENEKEKEKEKENEKEKENVNEYEDEKKSIL 3815983 Query: 150 PKRKP 154 +KP Sbjct: 3815982 FSKKP 3815968 Score = 31.2 bits (69), Expect = 0.49 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = +3 Query: 139 DSPGPSTSSVLPKRKPDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSGG 188 D+ P LP+ + +KP R Y+P GG G RG S GG Sbjct: 4440162 DTTNPGYQPPLPESETQKKPTRPRDYSPRRTRGGFRGGSSGGFRGGSGGG 4440311 Score = 30.0 bits (66), Expect = 1.1 Identities = 20/72 (27%), Positives = 39/72 (54%) Frame = +2 Query: 67 EAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGK 126 E +E D +V++Q + K+ E+L VEK KEK ++ E++K ++K + + +E + Sbjct: 1949777 EQEMEIDNIVQQQ----LNQQKLIEKLVQSVEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 1949944 Query: 127 SYKGNARKHPEE 138 K + +E Sbjct: 1949945 KEKEKEKDKRKE 1949980 Score = 29.6 bits (65), Expect = 1.4 Identities = 19/84 (22%), Positives = 38/84 (45%) Frame = +2 Query: 90 QEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVL 149 Q + Q + +++ +Q ++Q+++Q+ + Q + + + P S + Sbjct: 3378353 QPQPQPQPQPQQQQQQQQQQQQQQQQRQPQQPQQPQPQQQNQQQNQQQNQQPKKSQNDDK 3378532 Query: 150 PKRKPDRKPLRGGGYNPLSGEGGG 173 PK PD+KP G Y+ GGG Sbjct: 3378533 PK--PDKKP--KGSYSKGGSVGGG 3378592 Score = 28.9 bits (63), Expect = 2.4 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%) Frame = -2 Query: 77 KRQEALAAARLKMQEELNAQVEKHK----EKLRQLEEQKRRQKIE 117 K QE +E+ + ++EK K EKLRQLE+++ +KIE Sbjct: 3134044 KEQERKIIEEQLAKEQESERIEKEKAMAREKLRQLEQEEIHKKIE 3133910 Score = 28.9 bits (63), Expect = 2.4 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%) Frame = +3 Query: 62 QLDRAEAAVEPDVVVKRQEALAAA----RLKMQEELNAQVEKHKEKLRQLEEQKRRQKIE 117 Q+D+ E + D ++ L+A +LK Q + ++ EK KL + EE + E Sbjct: 4496907 QVDQDEDDEDEDDEDDVRQVLSAEAVYLKLKEQYKSKSKTEKQSNKLVK-EEDHEEDEDE 4497083 Query: 118 MWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLPKRKPDRK 157 D +E Y+G E+D + + K+K +K Sbjct: 4497084 DEDDEEEDAIYEGEENDDEEDDDEEEN*KPLTKKKKEKKK 4497203 Score = 28.5 bits (62), Expect = 3.2 Identities = 20/92 (21%), Positives = 45/92 (48%) Frame = +3 Query: 36 YIVFSCILLYVVFQKLSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNA 95 Y ++ +L + F ++S + ++ + + +E +K + +Q++ Sbjct: 2385084 YFIYLLLLFFFFFSQISKSDKFIQILNQAKHQKEIEQ---IKLNDNKNNENNNLQDK--- 2385245 Query: 96 QVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKS 127 + EK KEK RQL+ Q+++Q++ S E K+ Sbjct: 2385246 EKEKEKEKERQLQIQQQQQQVNPMISFHEHKN 2385341 Score = 28.5 bits (62), Expect = 3.2 Identities = 14/65 (21%), Positives = 35/65 (53%) Frame = +1 Query: 91 EELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLP 150 EE + E+ +E+ + EE++ ++ E + +EG+ + + E+D+ ++V Sbjct: 3590920 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEGEDEDEDEEEGDEDDNNKHKNNNVSG 3591099 Query: 151 KRKPD 155 K++P+ Sbjct: 3591100 KKRPN 3591114 Score = 28.1 bits (61), Expect = 4.1 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = +1 Query: 87 LKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYK 129 L + +E + +EK KE+ + L+EQK++Q+ + Q+ + K Sbjct: 73405 LDLVKEAKSIIEKEKEEEKLLKEQKQQQQQQQQQQQQQQQPLK 73533 Score = 27.3 bits (59), Expect = 7.1 Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 4/36 (11%) Frame = +3 Query: 96 QVEKHKEKLRQLEEQKRRQKIEMW----DSMQEGKS 127 Q +K + K +QL++QKR K ++W +S+++GK+ Sbjct: 1118364 QSKKSQLKTQQLKDQKRETKNKLWSNEIESVKKGKT 1118471 Score = 27.3 bits (59), Expect = 7.1 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = +3 Query: 59 RQRQLD-RAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQ 110 RQ++L+ + E ++ ++ QE + + QE L+ Q+E KEK RQLE++ Sbjct: 1446417 RQKELEIQREIELQKEIERINQEEKKRKQYE-QELLSKQIELEKEKERQLEKE 1446572 Score = 26.9 bits (58), Expect = 9.2 Identities = 16/71 (22%), Positives = 31/71 (43%) Frame = +2 Query: 74 VVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNAR 133 +++K +++ + LK + + V KH+ K L K + +++ W + G G Sbjct: 933206 LIIKIKKSYEISILKNLLKAHTFVSKHEFKDSILLLYKSKIELDQWRETENGLHSTGTTH 933385 Query: 134 KHPEEDSPGPS 144 KH S S Sbjct: 933386 KHSSSSSSSSS 933418 >gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromosome 2, whole genome shotgun sequence Length = 8484197 Score = 33.9 bits (76), Expect = 0.075 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%) Frame = -2 Query: 59 RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQ--KRRQKI 116 +Q+Q R +Q A+ RLK + E ++E+ LEE+ KRR+K+ Sbjct: 5783581 QQQQQQRVATEAIQFQQTPQQLAIEQERLKQERENEKKIEQ-----ANLEEEMKKRREKV 5783417 Query: 117 EMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLPK 151 E W + + K + + S P+T++ K Sbjct: 5783416 EQWRKQKLEQELKASGSSNSGSTSSPPTTTTTTTK 5783312 Score = 33.1 bits (74), Expect = 0.13 Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 3/84 (3%) Frame = -1 Query: 59 RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEK---LRQLEEQKRRQK 115 +Q+Q + + + + K++E + K +E+ Q+EK KEK +Q E+++R+Q+ Sbjct: 4599827 QQQQQQQQQQQQQQEKEKKQKEKEKEKKQKEKEKEKKQIEKEKEKEKEKKQKEKEERQQQ 4599648 Query: 116 IEMWDSMQEGKSYKGNARKHPEED 139 + ++ K K R+ E++ Sbjct: 4599647 QQQLQLKEKEKQQKEKERREKEKE 4599576 Score = 32.0 bits (71), Expect = 0.29 Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 8/100 (8%) Frame = +3 Query: 96 QVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVLPKRKPD 155 Q ++ +++ +Q ++Q+++ +++ +S + K N + ++ G + L + + Sbjct: 1109541 QQQQQQQQQQQQQQQQQQPQLQTNESNNNNEDIKQNDNNNNNSNNNGLNNLQKLIEENLE 1109720 Query: 156 RKPLRGGG--------YNPLSGEGGGACSWRPGRRGPSSG 187 L GG +NPLSG GG+ S+ P G G Sbjct: 1109721 GSNLSNGGNSGSSFSPFNPLSGSNGGS-SFGPFGSGGGGG 1109837 Score = 30.8 bits (68), Expect = 0.64 Identities = 16/64 (25%), Positives = 36/64 (56%) Frame = +3 Query: 90 QEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVL 149 Q+E Q + +E+ +QLE+Q+ +Q+ + Q+G+ + + P SP S+++ + Sbjct: 1155399 QQEQPQQEQSQQEQQQQLEQQQEQQQEHQQEHQQQGQQ-EQQQEQQPSTTSPISSSTTTI 1155575 Query: 150 PKRK 153 K++ Sbjct: 1155576 IKQE 1155587 Score = 30.8 bits (68), Expect = 0.64 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 16/106 (15%) Frame = +3 Query: 101 KEKLRQL---------EEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSS---- 147 K K+ QL QKRR++++ QE K Y N + +++ + ++ Sbjct: 6738885 KRKINQLVSKINKANQSHQKRRERLD-----QESKLYLENLKNKQNDNNNNNNNNNNNNN 6739049 Query: 148 ---VLPKRKPDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 + P + R RGG G GG+ R RG S GG G Sbjct: 6739050 NNNINPVKTGSRGASRGGSRGGRGGSRGGS---RGASRGGSRGGRG 6739178 Score = 30.4 bits (67), Expect = 0.83 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = -1 Query: 50 KLSTRLRAL-RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLR 105 KLS +R + Q LD +A +E V K+ E AAAR K +E E+ KEK R Sbjct: 4766657 KLSNLMRVIGTQAVLDPTKALLE---VTKKMEERAAARDKKNQENKLTPEQRKEKKR 4766496 Score = 29.3 bits (64), Expect = 1.9 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 12/92 (13%) Frame = -2 Query: 111 KRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPS----TSSVLPKRKPDRKPLRG----- 161 K+++K + KS K N+ + ++D PG ++ L K D K + Sbjct: 8135407 KKKKKSILRGEKPIKKSIKSNSNNN-KDDEPGLKIGRFSNGTLHINKHDIKTVYSSKSKG 8135231 Query: 162 ---GGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 GG + G GGG R G RG SGG G Sbjct: 8135230 YNRGGSSSRGGGGGGRGGSRGGGRGGRSGGRG 8135135 Score = 28.5 bits (62), Expect = 3.2 Identities = 12/53 (22%), Positives = 30/53 (56%) Frame = -3 Query: 86 RLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEE 138 + + ++E ++EK KEK ++ E++K ++K + + +E + + R+ E Sbjct: 1104711 KTEKEKEKEKEIEKEKEKEKEKEKEKEKEKEKEIEKEREKEKERERERERERE 1104553 Score = 27.7 bits (60), Expect = 5.4 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -2 Query: 79 QEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEE 138 +E LAA + + ++E + EK KEK ++ + K K S E KS K ++ +E Sbjct: 1711087 EEYLAALKSEKEKEKEKEKEKEKEKEKEKDSNKDDTK-----SKDENKSSKKSSSSSKDE 1710923 Score = 27.7 bits (60), Expect = 5.4 Identities = 20/51 (39%), Positives = 21/51 (41%) Frame = -2 Query: 136 PEEDSPGPSTSSVLPKRKPDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSS 186 P+ P PS R P R P P S GGGA S P R PSS Sbjct: 1226632 PKPLPPPPSLLGGASSRLPQRSP-------PSSRLGGGASSRLPQRSPPSS 1226501 Score = 27.3 bits (59), Expect = 7.1 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEM---WDSMQEGKSYKGNAR 133 K+Q+ + + ++E Q ++ ++ +QLE Q + KIE+ ++ +E K+ K Sbjct: 2489710 KQQQQQKQEKQQQKQEKQQQKQEKPQQKQQLENQIKNLKIEIKKEEENNKEIKNKKEEVE 2489889 Query: 134 KHPEEDS 140 K EE++ Sbjct: 2489890 KEKEENN 2489910 Score = 27.3 bits (59), Expect = 7.1 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 88 KMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQE 124 +++ N + KH+EKL+Q ++Q++ K + QE Sbjct: 5597792 ELKRRENEIIRKHQEKLKQQDDQQQDDKQQQQQQSQE 5597682 Score = 27.3 bits (59), Expect = 7.1 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = -3 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEM---WDSMQEGKSYKGNAR 133 K+Q+ + + ++E Q ++ ++ +QLE Q + KIE+ ++ +E K+ K Sbjct: 3542076 KQQQQQKQEKQQQKQEKQQQKQEKPQQKQQLENQIKNLKIEIKKEEENNKEIKNKKEEVE 3541897 Query: 134 KHPEEDS 140 K EE++ Sbjct: 3541896 KEKEENN 3541876 Score = 26.9 bits (58), Expect = 9.2 Identities = 13/55 (23%), Positives = 29/55 (52%) Frame = +2 Query: 60 QRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQ 114 QR+ ++ + + K +E + ++E ++EK KEK ++ E++K R+ Sbjct: 1852943 QREREKEKEKEKEREKEKEKEREREREREKEKEKEIEIEKEKEKEKEKEKEKERE 1853107 Score = 26.9 bits (58), Expect = 9.2 Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Frame = +2 Query: 71 EPDVVVKRQEALAAARLKMQE-ELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYK 129 E ++ ++R+ R K +E E ++EK KEK ++ E++K +++ + +E + + Sbjct: 1853105 EIEIEIEREIKREIEREKEKEREKEIEIEKEKEKEKEKEKEKEKERERERERERERERER 1853284 Query: 130 GNARKHPEE 138 R+ E Sbjct: 1853285 ERERERERE 1853311 >gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromosome 5, whole genome shotgun sequence Length = 5125352 Score = 33.1 bits (74), Expect = 0.13 Identities = 12/32 (37%), Positives = 26/32 (81%) Frame = +2 Query: 86 RLKMQEELNAQVEKHKEKLRQLEEQKRRQKIE 117 RL+ ++++ +VEK EK++Q+E++K ++K+E Sbjct: 3547436 RLENEKKMLKRVEKEMEKVKQIEKEKEKEKVE 3547531 Score = 30.0 bits (66), Expect = 1.1 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = -2 Query: 90 QEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSPGPSTSSVL 149 ++EL + +K KEK ++L+E++ ++K +E K K K EED Sbjct: 1348963 EKELKEKDDKEKEKEKELKEREDKEK-------EEDKEAKDKVDKEKEEDKQKQDKEKEE 1348805 Query: 150 PKRKPDR 156 K K ++ Sbjct: 1348804 DKEKQEK 1348784 Score = 29.6 bits (65), Expect = 1.4 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = +2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQ 114 K+Q+ +AAA +L + EK KEK ++ E++K+ Q Sbjct: 4679918 KKQQEIAAAAAVADLKLKQEKEKEKEKEKEKEKEKQSQ 4680031 Score = 29.3 bits (64), Expect = 1.9 Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +1 Query: 59 RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKH-KEKLRQLEEQKRRQKIE 117 R+R+L+R + ++R+ L R ++++E + E+ KEK +QLE ++ + ++E Sbjct: 1127695 RERELERERERQIKEKELERERELERERERIEKEKLLERERERKEKEKQLEREREQLRLE 1127874 Score = 28.5 bits (62), Expect = 3.2 Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 76 VKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQ---------------KIEMWD 120 +KR E K +EE + EK KEK ++ E++K ++ K ++ Sbjct: 117213 IKRYEKEKEEIEKEKEEKEKEKEKEKEKEKEKEKEKEKEKEKEKETNFNLYNTFKTQISH 117034 Query: 121 SMQEGKSYKGNARKHPEEDSPGPSTSSVLPKR 152 S +E + + + E++ P S PK+ Sbjct: 117033 SQEEEEKEEEKEEEEKEKEKVAPPRSRGRPKK 116938 Score = 26.9 bits (58), Expect = 9.2 Identities = 18/93 (19%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Frame = +2 Query: 46 VVFQKLSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELN-AQVEKHKEKL 104 ++ +KL +++++ E E +++Q+ + ++ E N + EK KEK Sbjct: 3545786 ILKRKLKREELEIKRKKEFEFEKEREKQREIEKQKRIEIENQRIIETENQTKREKEKEKE 3545965 Query: 105 RQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPE 137 R+ ++Q ++ W++++E K ++ E Sbjct: 3545966 RESQKQNEIKRKREWEAVKETVILKNEIKRKRE 3546064 Score = 26.9 bits (58), Expect = 9.2 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -3 Query: 75 VVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQK 115 V+KR E + + +E + EK KEK ++ E++K ++K Sbjct: 117234 VIKRIENIKRYEKEKEEIEKEKEEKEKEKEKEKEKEKEKEK 117112 >gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole genome shotgun sequence Length = 4923596 Score = 33.1 bits (74), Expect = 0.13 Identities = 20/91 (21%), Positives = 49/91 (53%), Gaps = 9/91 (9%) Frame = +1 Query: 59 RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQ---------LEE 109 +Q++L++ + E + K++E LA ++ ++E + +K+ EK ++ LEE Sbjct: 583426 KQQELEKLKLEEEERLRKKQEEQLAKREVEKEQERLEKKKKNDEKRKKVEENQQQRILEE 583605 Query: 110 QKRRQKIEMWDSMQEGKSYKGNARKHPEEDS 140 +K++++ E + ++ K ++ EED+ Sbjct: 583606 EKKKKEAEDRELARKHKEDSDKKKREEEEDA 583698 Score = 32.3 bits (72), Expect = 0.22 Identities = 23/90 (25%), Positives = 38/90 (42%) Frame = -2 Query: 49 QKLSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLE 108 QK+ L Q Q + AE KR+E + ++ + +H+EKLR Sbjct: 2746636 QKIEEEKERLNQ-QKEEAEREEREQEQRKRKEEQDRVNNEKKQRQEREDAEHREKLRLRN 2746460 Query: 109 EQKRRQKIEMWDSMQEGKSYKGNARKHPEE 138 EQ +++ E+ D ++ K K K E Sbjct: 2746459 EQLEKERQEIRDKEEQEKQEKDRLEKERRE 2746370 Score = 31.2 bits (69), Expect = 0.49 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = -1 Query: 69 AVEPDVVVKRQEALAAARLKMQE-ELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKS 127 A E DV+ ++ + + + K +E E ++EK KEK R+ E++K R+ + +E + Sbjct: 2936570 AKEKDVLQEKDKIIQFEKEKEKEKEKEKEIEKEKEKEREREKEKERETETETEKEKEKEK 2936391 Query: 128 YKGNARKHPEE 138 K ++ +E Sbjct: 2936390 EKEKEKEKEKE 2936358 Score = 30.0 bits (66), Expect = 1.1 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = -2 Query: 49 QKLSTRLRALRQRQLDR--AEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQ 106 ++L A Q + +R AEAA +R EA AAA + ++E ++EK K + Sbjct: 2114167 ERLEAEAAAAAQAEKERLEAEAAAAAQAEKERLEAEAAAAAQAEKEEAERLEKEKLEAEA 2113988 Query: 107 LEEQKRRQKIE 117 Q ++++E Sbjct: 2113987 AAAQAEKERLE 2113955 Score = 28.5 bits (62), Expect = 3.2 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = +3 Query: 94 NAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKH 135 N ++EK K KL+Q ++Q+++Q+ + +D GN+ H Sbjct: 1316247 NLRIEKPKPKLQQQQQQQQQQRQQDYDHGHGHSHGGGNSHGH 1316372 Score = 28.1 bits (61), Expect = 4.1 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = +1 Query: 67 EAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQE 124 E +E D V K++ + ++ + E+ +EK KEK ++ E++K + + D QE Sbjct: 863515 EIEIEIDTVTKKEIGIG---IEKEIEIEKGIEKEKEKKKEKEKEKEIEIDMVIDQPQE 863679 Score = 28.1 bits (61), Expect = 4.1 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -3 Query: 139 DSPGPSTSSVLPKRKPDRKPL 159 D P PS SS P RKP KP+ Sbjct: 2795844 DKPSPSVSSNQPSRKPQVKPV 2795782 Score = 27.3 bits (59), Expect = 7.1 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 18 GLRYLHVTVGSLLATYGWYIVFSCILLYVVFQKLST 53 G Y ++T+GSLL Y V C+ +Y V L T Sbjct: 559204 GFIYFNITIGSLLYLYVCICVCICVCVYDVVWVLYT 559311 Score = 27.3 bits (59), Expect = 7.1 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -3 Query: 67 EAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQE 124 E VEP V ++ + + ++E++ VEK ++K Q EEQK QK E ++E Sbjct: 4239486 EKVVEPIV---EEKIIVEEKTIIEEKV---VEKEEQKEEQKEEQKEEQKEEQKKVVEE 4239331 Score = 27.3 bits (59), Expect = 7.1 Identities = 24/86 (27%), Positives = 35/86 (40%) Frame = -2 Query: 54 RLRALRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRR 113 RL A ++ + AVE + A A K +EE A++EK R +EQ+ + Sbjct: 2745838 RLAAEAAKKAEEERLAVEAAKKAEEDRLAAEAAKKEEEERLAEIEKK----RLADEQEAK 2745671 Query: 114 QKIEMWDSMQEGKSYKGNARKHPEED 139 + E E A K EED Sbjct: 2745670 RIAEEEAKRAEEARLAEEAAKKAEED 2745593 Score = 27.3 bits (59), Expect = 7.1 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +1 Query: 39 FSCILLYVVFQKLSTRLRALRQRQLDRAEAAVE-PDVVVKRQEALAAARLKMQEELNAQV 97 F+ +L YV + L L + E E PD +V + +++ + Sbjct: 3810115 FAELLEYVDIENLEQNLGGNLDYNYNIDEYLKENPDPIVDTPPITFSTETDSKKQKKEKK 3810294 Query: 98 EKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNA 132 ++ KEK ++ +E+K+ +K E +E K K A Sbjct: 3810295 KEEKEKKKEEKEKKKEEKEEKKKEKEEKKKLKKEA 3810399 Score = 26.9 bits (58), Expect = 9.2 Identities = 15/79 (18%), Positives = 42/79 (53%), Gaps = 1/79 (1%) Frame = -3 Query: 47 VFQKLSTRLRALRQRQLDRA-EAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLR 105 + +L +++ ++++ + E +E ++ +RQE + +EE + E+ +E+ Sbjct: 4797180 IVDELDSQMEKEEEQEIQKQLEKEIETEIKKRRQE-----ESEQEEEEEQEEEQEEEQEE 4797016 Query: 106 QLEEQKRRQKIEMWDSMQE 124 + EE++ ++ E D+ +E Sbjct: 4797015 EQEEEQEEEQEEQEDNDEE 4796959 >gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromosome 6, whole genome shotgun sequence Length = 3602379 Score = 32.3 bits (72), Expect = 0.22 Identities = 24/82 (29%), Positives = 38/82 (46%) Frame = +3 Query: 74 VVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNAR 133 VVVK+ +LK QE +N + +K KEK +Q +QKR +++ + Sbjct: 725745 VVVKKA---VQKKLKEQETINEEKDKRKEKRKQERKQKRSNN----NTINNDDEDDEDDE 725903 Query: 134 KHPEEDSPGPSTSSVLPKRKPD 155 EE+S G + +L K D Sbjct: 725904 DQDEEESIGDDNTPLLGKDSSD 725969 Score = 32.3 bits (72), Expect = 0.22 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Frame = +1 Query: 77 KRQEALAAARLKMQEELNAQVEKHK----EKLRQLEEQKRRQKIEMWDSMQEGKSYKGNA 132 K +E A +LK +E+ + +K K EK ++L+E+++ +K + +S + KS K Sbjct: 796153 KEKEKEKAKKLKEKEKEKEKAKKQKEKEKEKAKKLKEKEKEKKKKNSESEKPKKSNKSKK 796332 Query: 133 RKHPEEDSPGPSTS 146 ++ E +S S S Sbjct: 796333 QEDTENESESESES 796374 Score = 32.3 bits (72), Expect = 0.22 Identities = 23/113 (20%), Positives = 55/113 (48%), Gaps = 1/113 (0%) Frame = -3 Query: 28 SLLATYGWYIVFSC-ILLYVVFQKLSTRLRALRQRQLDRAEAAVEPDVVVKRQEALAAAR 86 +LL+ + Y + S LL ++ S + + +++Q D + + + + Q+ Sbjct: 298267 NLLSIFDQYPISSLPSLLNLITSPNSQQKKKQQEQQQDEQQQEEQQEEQQQEQQQ----- 298103 Query: 87 LKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEED 139 + +EE Q E+ +++ +Q EEQ+ ++ E + Q+G+ + + EE+ Sbjct: 298102 -QQEEEQQQQEEQQQQEEQQEEEQQEEEQQEQQEEQQQGEQQEQQEEEQQEEE 297947 Score = 32.0 bits (71), Expect = 0.29 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +3 Query: 98 EKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARK 134 EK KEK ++ E++K ++K + ++GK KGN +K Sbjct: 2836215 EKEKEKEKEKEKEKEKEKKKKRKKERKGKEKKGNQKK 2836325 Score = 31.2 bits (69), Expect = 0.49 Identities = 23/85 (27%), Positives = 42/85 (49%) Frame = +2 Query: 73 DVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNA 132 +V++ +E AR+ +QE Q E ++E LR +E+K + + E D + Sbjct: 20348 NVLLLNREENDRARMIVQE----QDEAYEESLRADKEKKEKAEKERIDFENKKIEKLSKG 20515 Query: 133 RKHPEEDSPGPSTSSVLPKRKPDRK 157 PEE + GP+++ ++ K D K Sbjct: 20516 ALVPEEPAKGPNSTQIVFKLPDDSK 20590 Score = 30.0 bits (66), Expect = 1.1 Identities = 12/54 (22%), Positives = 32/54 (59%) Frame = -1 Query: 88 KMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHPEEDSP 141 K++E+L +++K +++ QLE+++ ++K + QE + + ++ +D P Sbjct: 2722224 KVEEDLILKLQKQRQRQLQLEQEQEQEKQKQQQLQQEQEQQQQQQQEQIPQDQP 2722063 Score = 29.6 bits (65), Expect = 1.4 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = +1 Query: 90 QEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNAR 133 ++E + EK KEK ++ E++K ++K + + E K+Y N + Sbjct: 2373919 EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKNKEIENKTYPNNCK 2374050 Score = 29.3 bits (64), Expect = 1.9 Identities = 19/87 (21%), Positives = 42/87 (48%) Frame = -3 Query: 71 EPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKG 130 EP+ +++E + QEE QVE+ +EK ++ E+++ +++ ++ ++ Sbjct: 332275 EPEEQEEQEEQEEQEEQEEQEEQVEQVEQIEEKEQEQEKEEEQEEDKI--------TFNN 332120 Query: 131 NARKHPEEDSPGPSTSSVLPKRKPDRK 157 N + EE+ G ++KP K Sbjct: 332119 NEEEEEEEEEDGDDDKDENVEKKPKGK 332039 Score = 28.9 bits (63), Expect = 2.4 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = +1 Query: 62 QLDRAEAAVEPDVVVKRQEALAAARLKM--QEELNAQVEKHKEKLRQLEEQKRRQKIEMW 119 Q ++ + E D + KRQE + Q++L + + KEK ++ +EQK +++ E Sbjct: 1773949 QREKEQQQKEKDELKKRQEKQLEKERQQEKQQQLEQKEKDQKEKDQKEKEQKEKEQKE-- 1774122 Query: 120 DSMQEGKSYKGNARKHPEE 138 ++ K K +K EE Sbjct: 1774123 --KEKAKKLKQQEQKEKEE 1774173 Score = 28.1 bits (61), Expect = 4.1 Identities = 16/77 (20%), Positives = 34/77 (44%) Frame = -3 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHP 136 + +E + + QEE + ++ +E+ Q EEQ+++Q+ + Q+ + + + Sbjct: 297943 QEEEQQEEEQQEQQEEQQEEEQEEEEQQEQQEEQQQQQQQQQQQQQQQQQQQQQQQQHQQ 297764 Query: 137 EEDSPGPSTSSVLPKRK 153 EE KRK Sbjct: 297763 EEQQQEEKVQIQEKKRK 297713 Score = 27.7 bits (60), Expect = 5.4 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -2 Query: 119 WDSMQEGKSYKGNARKHPEEDSP 141 W+ +Q G + NAR HP++ +P Sbjct: 3523208 WNKLQFGSATSNNARVHPDQPNP 3523140 Score = 27.3 bits (59), Expect = 7.1 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +2 Query: 92 ELNAQVEKHKEKLRQLEEQK--RRQKIEMWDSMQEGKSYKGNARKHPEEDS 140 ELNA K K+K RQL+ K R + D +E + K R EE+S Sbjct: 715850 ELNADQLKEKKKQRQLKSMKDGRLAQKRKRDEEKEKEKEKEEERDRQEEES 716002 Score = 27.3 bits (59), Expect = 7.1 Identities = 15/79 (18%), Positives = 38/79 (48%) Frame = -3 Query: 60 QRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMW 119 Q+Q ++ E + + +E + QEE + ++ +E+ Q EEQ++ ++ E Sbjct: 298150 QQQEEQQEEQQQEQQQQQEEEQQQQEEQQQQEEQQEEEQQEEEQQEQQEEQQQGEQQEQQ 297971 Query: 120 DSMQEGKSYKGNARKHPEE 138 + Q+ + + ++ E+ Sbjct: 297970 EEEQQEEEQQEEEQQEEEQ 297914 >gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromosome 4, whole genome shotgun sequence Length = 5450249 Score = 31.2 bits (69), Expect = 0.49 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 12/56 (21%) Frame = -1 Query: 75 VVKRQEALAAARLK-----MQEELNAQVEKHKEKLRQL-------EEQKRRQKIEM 118 + K +EA A+ K ++EEL A+ + KEKL++L EE++R +K+E+ Sbjct: 2711225 ITKEEEAAQKAKEKAEKEKLKEELRAKEKAEKEKLKELKRQQKEKEEKERAEKVEI 2711058 Score = 30.4 bits (67), Expect = 0.83 Identities = 17/80 (21%), Positives = 41/80 (51%) Frame = -3 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKHP 136 K +E +++++E+ Q+E KEK ++ E++K ++ + ++ ++ + Sbjct: 1015752 KEREIGKEIDIEIEKEIEKQIEIEKEKEKEKEKEKEKENEKEKENEKDTPFSPIYSNNSN 1015573 Query: 137 EEDSPGPSTSSVLPKRKPDR 156 +P P+T S+ P P+R Sbjct: 1015572 ASSTPSPAT-SISPDNTPNR 1015516 Score = 30.0 bits (66), Expect = 1.1 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 20/76 (26%) Frame = +3 Query: 62 QLDRAEAA---VEPDVVVKRQEALAAARLKMQEELNAQVEKHKEK--------------- 103 +L++AEA E + +++++ + A RL++QEE E+ E+ Sbjct: 2554560 RLEKAEALRLQKEQEERIRKEKEIEAERLRVQEEERLAKERQAEEDRMRAVEEEKLKLME 2554739 Query: 104 --LRQLEEQKRRQKIE 117 ++Q EE RRQKIE Sbjct: 2554740 AEIKQREEDIRRQKIE 2554787 Score = 29.3 bits (64), Expect = 1.9 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = -1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKI---EMWDSMQEGKSYKGNAR 133 ++ E + +K+ + L +KHKEKL + +EQKR K+ + ++E Y + Sbjct: 1382612 QQHEEEEISNIKVSKTLTDAEKKHKEKLSR-KEQKRIDKLVNKSHKEKIEEYNKYLSSLS 1382436 Query: 134 KHPEEDSPGP 143 +H + GP Sbjct: 1382435 EHHDVPKVGP 1382406 Score = 28.9 bits (63), Expect = 2.4 Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = -1 Query: 49 QKLSTRLRAL-RQRQLDRAEAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLRQL 107 ++L +L+ L +Q Q ++ + VE + +E ++ QEE Q ++ +E+ + Sbjct: 5275736 KQLQEQLQELQKQLQEEQLQQEVEEQEEEENEEKEKEEEVEEQEEEEEQPQQQEEEEEEE 5275557 Query: 108 EEQKRRQKIEMWDSMQEGKSYKGNARKHP 136 EEQ++++K E Q G++ + ++ P Sbjct: 5275556 EEQQQQEKQE---KQQAGQTIQELLKEEP 5275479 Score = 28.5 bits (62), Expect = 3.2 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -3 Query: 58 LRQRQLDRAEAAVEPDVVVKRQEALAAARLKMQE-ELNAQVEKHKEKLRQLEEQKRRQKI 116 + ++ ++ + E D K E + + K +E E +VEK KEK ++ E++K ++K Sbjct: 1837461 IEEKVEEKKDEKKEQDKKEKEDEVMKDQQDKDKEVEKEKEVEKEKEKEKEKEKEKEKEKE 1837282 Query: 117 EMWDSMQEGKSYK 129 + + +E + K Sbjct: 1837281 KEKEKEKEKEKEK 1837243 Score = 27.7 bits (60), Expect = 5.4 Identities = 12/63 (19%), Positives = 30/63 (47%) Frame = +3 Query: 76 VKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQEGKSYKGNARKH 135 + + + R + + + ++EK KEK ++LE +K ++ + Q+ + + + Sbjct: 674829 ITQSSIIVEERKNKRFKKDEKIEKKKEKEKELENEKENEQQQQQQQQQQQQEEENEENEE 675008 Query: 136 PEE 138 EE Sbjct: 675009 EEE 675017 Score = 27.3 bits (59), Expect = 7.1 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +3 Query: 76 VKRQEALAAARLKMQEELNAQVEKHKEKLRQLEE 109 +K ++ L +K+QEE + KH+E++++L E Sbjct: 703929 IKDKQLLEEKEIKIQEEKSEAQLKHREEMKRLRE 704030 Score = 27.3 bits (59), Expect = 7.1 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 9/62 (14%) Frame = -3 Query: 91 EELNAQVEKHKEKLRQLEEQKRRQKIEMWDSMQE---------GKSYKGNARKHPEEDSP 141 E+ +EK+K QLE + +E D E K + +P+ DSP Sbjct: 3218379 EKAQRIIEKNKSNFEQLESFTNNKMVETIDGSNEILKNVLESLAKEQREKIENNPDHDSP 3218200 Query: 142 GP 143 P Sbjct: 3218199 PP 3218194 Database: D.discoideum_AX4/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 33,943,072 Number of sequences in database: 6 Lambda K H 0.314 0.132 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,233,281 Number of Sequences: 6 Number of extensions: 43671 Number of successful extensions: 552 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 96 Number of HSP's gapped (non-prelim): 548 length of query: 190 length of database: 11,314,357 effective HSP length: 95 effective length of query: 95 effective length of database: 11,313,787 effective search space: 1074809765 effective search space used: 1074809765 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 58 (26.9 bits)