TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|86438358|gb|AAI12741.1| Selenoprotein S [Bos taurus] (188 letters) Database: I.multifiliis_strain_G5/genome.fa 2017 sequences; 48,799,969 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|340501382|gb|GL984282.1| Ichthyophthirius multifiliis unplace... 34 0.10 gi|340499430|gb|GL984923.1| Ichthyophthirius multifiliis unplace... 30 1.1 gi|340507794|gb|GL983394.1| Ichthyophthirius multifiliis unplace... 30 1.5 gi|340503888|gb|GL983999.1| Ichthyophthirius multifiliis unplace... 30 1.9 gi|340505964|gb|GL983749.1| Ichthyophthirius multifiliis unplace... 28 7.3 gi|340503916|gb|GL983996.1| Ichthyophthirius multifiliis unplace... 27 9.6 gi|340505486|gb|GL983812.1| Ichthyophthirius multifiliis unplace... 27 9.6 >gi|340501382|gb|GL984282.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251321, whole genome shotgun sequence Length = 303348 Score = 33.9 bits (76), Expect = 0.10 Identities = 22/87 (25%), Positives = 41/87 (47%) Frame = +2 Query: 71 EPDIVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEEKRRQKIEMWDSMQEGKSYKG 130 E +I +++E + + +EE + EK KEK ++ EEE+ +K + + +E K K Sbjct: 211271 EINIEEEKKEEEKEEKEEEEEEEENEKEKEKEKEKEKEEEEEEEKKKEEEKKEEEKEEKE 211450 Query: 131 NTRKPQEEDSPGPSTSSVIPKRKSDRK 157 + +E+ KRK +K Sbjct: 211451 EKEEKEEKKKKKKIEKKKKKKRKKKKK 211531 Score = 31.2 bits (69), Expect = 0.66 Identities = 18/81 (22%), Positives = 39/81 (48%) Frame = +1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLRQLEEEKRRQKIEMWDSMQEGKSYKGNTRKPQ 136 KR++ + + +EE + EK KEK ++ EEE+ +K ++ K K +K + Sbjct: 211435 KRRKRRKRRKRRKEEEEENRKEKEKEKEKEEEEEEEEEKKNKKKKKKKNKKKKKKKKKKK 211614 Query: 137 EEDSPGPSTSSVIPKRKSDRK 157 ++ +++ K++ K Sbjct: 211615 KK*KKKKKKKTMMKKKRKKIK 211677 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = +2 Query: 91 EELNAQVEK---HKEKLRQLEEEKRRQKIEMWDSMQEGKSYKGNTRKPQEEDSPGPSTSS 147 EE+N + EK KE+ + EEE+ +K + + +E + + +K +EE Sbjct: 211268 EEINIEEEKKEEEKEEKEEEEEEEENEKEKEKEKEKEKEEEEEEEKKKEEEKKEEEKEEK 211447 Query: 148 VIPKRKSDRK 157 + K ++K Sbjct: 211448 EEKEEKEEKK 211477 >gi|340499430|gb|GL984923.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_5495, whole genome shotgun sequence Length = 1353 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/51 (25%), Positives = 31/51 (60%) Frame = -3 Query: 88 KMQEELNAQVEKHKEKLRQLEEEKRRQKIEMWDSMQEGKSYKGNTRKPQEE 138 +++ E ++EK KEK ++ E+EK ++K + + +E + K ++ ++E Sbjct: 649 EIENEKENEIEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 497 >gi|340507794|gb|GL983394.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509249958, whole genome shotgun sequence Length = 43560 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/42 (35%), Positives = 28/42 (66%) Frame = +3 Query: 72 PDIVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEEKRR 113 PDI+ +QE + K + E N ++ KHKE++++ +EEK++ Sbjct: 28506 PDII--KQENIK----KKENEKNQELNKHKEEIKKNKEEKKK 28613 >gi|340503888|gb|GL983999.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251036, whole genome shotgun sequence Length = 50548 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 10/51 (19%) Frame = -1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKE----------KLRQLEEEKRRQKIE 117 +++E R K +EE + E+ KE K+RQ EEE++RQK E Sbjct: 37597 RKEEEEEEMRQKEEEEKRKEQERRKEEEEMRLK*EEKMRQKEEEEKRQKEE 37445 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = -3 Query: 88 KMQEELNAQVEKH-KEKLRQLEEEKRRQKIEMWDSMQEGKSYKGNTRK 134 K ++E+ + EK KEK + E+EKR ++ E ++ + K K N RK Sbjct: 38165 KREKEVKEKREKEVKEKREKEEKEKREKEEEEEETKGKRKKRKRNRRK 38022 >gi|340505964|gb|GL983749.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250725, whole genome shotgun sequence Length = 58153 Score = 27.7 bits (60), Expect = 7.3 Identities = 17/84 (20%), Positives = 43/84 (51%) Frame = +1 Query: 74 IVVKRQEALAAARLKMQEELNAQVEKHKEKLRQLEEEKRRQKIEMWDSMQEGKSYKGNTR 133 I +K+ + + KM+++L ++ KHK+K +Q ++ K RQK + + ++ + +K + Sbjct: 12508 IKIKK*KLKLKLKHKMKQKLKQKL-KHKQKQKQNKKNKLRQKKK*KNKQKQKQKHKNKHK 12684 Query: 134 KPQEEDSPGPSTSSVIPKRKSDRK 157 + + + K+ ++K Sbjct: 12685 HKHKHKHKHKNKHKIKHKQNQNQK 12756 >gi|340503916|gb|GL983996.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251033, whole genome shotgun sequence Length = 42044 Score = 27.3 bits (59), Expect = 9.6 Identities = 28/139 (20%), Positives = 60/139 (43%), Gaps = 15/139 (10%) Frame = -1 Query: 24 VTVGSLLATYGWYIVFSCILLYVVFQKLSTRLRALRQRHLDQAAAAL-----EPDIVVKR 78 + G++ + + ++ +++ V F ++ R+ +R D+ L +P+ Sbjct: 31697 IKYGNISSVPSMFYLYFALIIVVAFIGITY*WRSYAERRADEEREDLMLF*ADPEFFNLN 31518 Query: 79 QEALAAARLKMQEELNAQVEKHKEKLRQL---------EEEKRRQKIEMWDSMQEGKSYK 129 + L K ++L +K K K+ ++ +EEK ++ IE + ++ K Sbjct: 31517 KRLLD----K*DKDLTENEKKIKRKVDRI*KNLKKK*KKEEKEKKMIEKLERRRKRKEQG 31350 Query: 130 GNTRKPQEE-DSPGPSTSS 147 N P+E+ S G S SS Sbjct: 31349 DNYETPEEDKSSEGDSNSS 31293 >gi|340505486|gb|GL983812.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250848, whole genome shotgun sequence Length = 184484 Score = 27.3 bits (59), Expect = 9.6 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = -3 Query: 77 KRQEALAAARLKMQEELNAQ--VEKHKEKLRQLEEEKRRQ-KIEMWDSMQEGKSYKGNTR 133 K++E + + +EE N + EK+KEK EEK+ + K E + +E K + N Sbjct: 121119 KKEEKKEEKKEEKKEEKNEENLEEKNKEKKGDKNEEKKEEKKEEKKEEKKEEKKEEKNEE 120940 Query: 134 KPQE 137 K +E Sbjct: 120939 KNKE 120928 Database: I.multifiliis_strain_G5/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 48,799,969 Number of sequences in database: 2017 Lambda K H 0.314 0.132 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,634,110 Number of Sequences: 2017 Number of extensions: 57853 Number of successful extensions: 529 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 333 Number of HSP's gapped (non-prelim): 241 length of query: 188 length of database: 16,266,656 effective HSP length: 97 effective length of query: 91 effective length of database: 16,071,007 effective search space: 1462461637 effective search space used: 1462461637 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 59 (27.3 bits)