TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|56972261|gb|AAH88768.1| selenoprotein S [Xenopus (Silurana) tropicalis] (187 letters) Database: D.discoideum_AX4/genome.fa 6 sequences; 33,943,072 total letters Searching......done Score E Sequences producing significant alignments: (bits) Value gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromoso... 35 0.033 gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso... 33 0.095 gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromos... 31 0.62 gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso... 30 0.81 gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromoso... 29 1.8 gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromoso... 29 2.3 >gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromosome 4, whole genome shotgun sequence Length = 5450249 Score = 35.0 bits (79), Expect = 0.033 Identities = 21/82 (25%), Positives = 39/82 (47%) Frame = +1 Query: 72 EIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACR 131 +I + QE + + Q++ Q + +K + + EKR + KSS + Sbjct: 3842512 QIPQEQEQQQQQQQQQQQQQQQQQQQQTKKSISIYSEKRHSSEANQSSFVISKSSD---K 3842682 Query: 132 LGQEPSPSTSTSAATKPKQEKQ 153 +G+ PSPS+S+S+ + Q Q Sbjct: 3842683 IGKSPSPSSSSSSFSSSPQSSQ 3842748 Score = 34.7 bits (78), Expect = 0.043 Identities = 26/113 (23%), Positives = 55/113 (48%), Gaps = 4/113 (3%) Frame = -3 Query: 49 IQKLPQNFTRAGTSNHSTVTDPDEIVRRQEAVTAARLRMQEELNAQAE----LYKQKQVQ 104 + L + T T + ST++ P R + +Q+++ A+ + L +Q+Q+Q Sbjct: 5190060 VDLLTSSTTTTPTLSPSTLSPPISTARFSNDYL---ISLQDDIYAKQQQQLLLLQQQQIQ 5189890 Query: 105 LQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTSTSAATKPKQEKQERKT 157 +Q++ +Q+ +E + + +S PSPSTS++++T + Q T Sbjct: 5189889 IQQQLQQQQLEILQKNQSLLNSS-------SPSPSTSSTSSTSSISQSQNLNT 5189752 Score = 31.2 bits (69), Expect = 0.47 Identities = 24/88 (27%), Positives = 44/88 (50%) Frame = +3 Query: 69 DPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKV 128 + +E +R+++ + A RLR+QEE L K++Q EE R R +E ++ K + Sbjct: 2554596 EQEERIRKEKEIEAERLRVQEE----ERLAKERQA---EEDRMRAVEE----EKLKLMEA 2554742 Query: 129 ACRLGQEPSPSTSTSAATKPKQEKQERK 156 + +E + K+E+QE+K Sbjct: 2554743 EIKQREEDIRRQKIEEEERRKREEQEKK 2554826 Score = 29.6 bits (65), Expect = 1.4 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 8/119 (6%) Frame = -1 Query: 55 NFTRAGTSNHSTVTDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRN- 113 N +N+ + + RQ++ T Q A +KQK VQLQ+E + N Sbjct: 4951214 NNNNNNNNNNGNNNNNSNFLTRQDSSTQKEWDEQNVTEAFG-FWKQKAVQLQKETERYNA 4951038 Query: 114 -------IETWDRMKEGKSSKVACRLGQEPSPSTSTSAATKPKQEKQERKTLRGSGYNP 165 I+ + +++ SS + + E P T + +Q++Q+++ + S P Sbjct: 4951037 RRNARQTIDLTNILRKSTSSDLLIKPPVESPPLTPVGQDDEGEQQQQQQQQKQSSPSTP 4950861 Score = 27.3 bits (59), Expect = 6.8 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 10/103 (9%) Frame = -1 Query: 34 YGWYILLGCILIYLLIQKLPQNFTRAGTSNHSTVT---DPDEIVR-------RQEAVTAA 83 Y Y+ + LIY I+K PQ R SNH + P I++ +Q + + Sbjct: 1024991 YREYLFMELNLIYQTIEKDPQILKRFIKSNHKPIELFFTPLHILQCYLDGNYKQYSSSTF 1024812 Query: 84 RLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSS 126 L + Q L +++Q Q++++Q+N + SS Sbjct: 1024811 NLNTINQFLNQLNLKFLQKLQQQQQQQQQNSSSSSSSSSSSSS 1024683 Score = 26.9 bits (58), Expect = 8.9 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = +3 Query: 88 QEELNAQAELYKQKQVQLQEEKRQRNIETW----DRMKEGKSSKVACRLGQEPSPSTST- 142 +EE + E +QK+ Q QEE + + E D+ K+ K +K + EP + Sbjct: 4324434 EEEDEEKEEDEEQKEEQSQEEDSEESEEEQNSDEDKKKKKKQAKKVAKKETEPKKKEAKP 4324613 Query: 143 SAATKPKQEKQERK 156 KPK+E +++ Sbjct: 4324614 KKEAKPKKETTKKE 4324655 >gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole genome shotgun sequence Length = 6357299 Score = 33.5 bits (75), Expect = 0.095 Identities = 17/71 (23%), Positives = 36/71 (50%) Frame = -1 Query: 88 QEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTSTSAATK 147 + +L Q + +Q+Q Q Q++++Q+ + + ++ + + + Q+P P TST T+ Sbjct: 4830464 KSKLFGQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPPQTSTCTTTQ 4830285 Query: 148 PKQEKQERKTL 158 P E L Sbjct: 4830284 PTTTTTEEHKL 4830252 Score = 32.0 bits (71), Expect = 0.28 Identities = 19/88 (21%), Positives = 41/88 (46%) Frame = +3 Query: 68 TDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSK 127 T I + +T ++ Q + +Q+Q Q Q++++ ++T + Sbjct: 4822434 TPTKSIFNKNGNITIKEFETPQQQQQQQQQQQQQQQQQQQQQQPLILQTTST----NPTI 4822601 Query: 128 VACRLGQEPSPSTSTSAATKPKQEKQER 155 ++ + +EPSPS+ST+ + K K + R Sbjct: 4822602 ISIKSNKEPSPSSSTTTSIKKKNFNKRR 4822685 Score = 30.4 bits (67), Expect = 0.81 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 18/118 (15%) Frame = -3 Query: 57 TRAGTSNHSTVTD-PDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQ--------- 106 T T N +T+ + DE + +E+V ++E + E K+K+ + + Sbjct: 2808414 TEEETKNENTIVENKDEDKKVEESVQEKEEEKEKEKEKEKEKEKEKEKEKEKENNIEKEE 2808235 Query: 107 ----EEKRQRNIETWDRMKEGKSSKVACRLGQEPS----PSTSTSAATKPKQEKQERK 156 EEK ++N+E + KE K +K + P+ T K EK+E K Sbjct: 2808234 EKKEEEKEEKNVEK-EEEKEEKQTKTDDNMWNNEDEIDVPTVEGEIETDIKDEKKEEK 2808064 Score = 28.5 bits (62), Expect = 3.1 Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 4/99 (4%) Frame = -3 Query: 62 SNHSTVTDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETW---- 117 +N+ + D I + + + + Q++ Q +QKQ Q QE++ + +ET Sbjct: 4484940 NNNDDEGEDDNISYKIQQQQQQQQQQQQQQQQQQTSQRQKQYQQQEDEEEEEVETEQDDD 4484761 Query: 118 DRMKEGKSSKVACRLGQEPSPSTSTSAATKPKQEKQERK 156 D ++ + G+E + +QE+ E + Sbjct: 4484760 DEEEQQEEENAYSEYGEEDVDEEMVEEEEEEEQEEGEEE 4484644 Score = 27.7 bits (60), Expect = 5.2 Identities = 22/89 (24%), Positives = 42/89 (47%) Frame = +2 Query: 65 STVTDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGK 124 S++ P V +Q A T+ + +++EE K+++ + QEEK + ++ + K Sbjct: 2463884 SSIVKPAAPVVKQRAATSPKSKVKEEP------VKKEKDEDQEEKEEEEEPVAEKKTKSK 2464045 Query: 125 SSKVACRLGQEPSPSTSTSAATKPKQEKQ 153 SS ++P+ S S A +KQ Sbjct: 2464046 SSP------KKPTASKSKKKAAPEPDKKQ 2464114 Score = 27.3 bits (59), Expect = 6.8 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = -2 Query: 68 TDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSS 126 TD DE+ R + + + + L Q + QKQ Q Q+++++ I + + SS Sbjct: 4631902 TDKDELQREIKLMKVKKSILDNHLGKQQQQQLQKQQQQQQQQQKNEINSSTLIHNSTSS 4631726 >gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromosome 2, whole genome shotgun sequence Length = 8484197 Score = 30.8 bits (68), Expect = 0.62 Identities = 18/82 (21%), Positives = 38/82 (46%) Frame = +2 Query: 75 RRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQ 134 ++Q+ + + Q+++ Q + Q Q Q Q++ +Q+ + KS + L Sbjct: 5176427 QQQQQQQQQQQQQQQQIYIQHQHQHQPQQQPQQQPQQQQHSPKQTSPKSKSQQTPTALIS 5176606 Query: 135 EPSPSTSTSAATKPKQEKQERK 156 P+P++ + K EKQ+ K Sbjct: 5176607 TPTPTSKPISTKIEKPEKQQEK 5176672 Score = 30.4 bits (67), Expect = 0.81 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Frame = -2 Query: 63 NHSTVTDP-DEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMK 121 N +TD DEI + + R++ Q+ Q + +QKQ Q++K+Q ET + + Sbjct: 4679569 NDDIITDSYDEIFEKSKNERELRIQQQQHQQQQQQQQQQKQ---QQQKKQ---ETQQQQQ 4679408 Query: 122 EGKSSKVACRLGQEPSPSTSTSAATKPKQEKQERK 156 + + Q+ P +P+Q++Q++K Sbjct: 4679407 QQQ---------QQEQPQFQPQQQPQPQQQRQKQK 4679330 Score = 30.0 bits (66), Expect = 1.1 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%) Frame = -3 Query: 76 RQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQE 135 RQ+ T + ++E + +L KQK+ Q E ++ + D + + K + L +E Sbjct: 5496324 RQKQSTQKQKTPEDEEKERIKLEKQKERDQQRELMKQTMSGGDPNGKSQQQKQSQPLPEE 5496145 Query: 136 P-----SPSTSTSAATKPKQEKQERK 156 P P T+ P Q++Q+++ Sbjct: 5496144 PPKPISQPQTTQPKPLSPSQQQQQQQ 5496067 Score = 28.1 bits (61), Expect = 4.0 Identities = 18/75 (24%), Positives = 38/75 (50%) Frame = -3 Query: 82 AARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTS 141 ++R Q++ Q + ++Q Q Q Q +++Q NI+ + SS+ R Q+P Sbjct: 6167094 SSRSLHQQQQQQQHQQHQQNQQQNQHQQQQ-NIKY---NQSSNSSQSGSRSSQQPQQQPQ 6166927 Query: 142 TSAATKPKQEKQERK 156 +P+Q++Q+ + Sbjct: 6166926 QQQQQQPQQQQQQNQ 6166882 Score = 28.1 bits (61), Expect = 4.0 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%) Frame = +2 Query: 72 EIVRRQEAVTAARLRMQEELNAQAELYKQKQ-------VQLQEEKRQRNIETWDRMKEGK 124 +++++Q+ R R Q + Q + Q Q + LQ ++ + ++ ++ K Sbjct: 5834051 QLLQQQQHQHKHRHRHQHQHQHQHQHQHQHQQPLLILLIPLQIHQQPPQLHHQNQNQKSK 5834230 Query: 125 SSKVACRLGQEPSPSTSTSAATKPKQEKQERKTLRGSGYNPLT 167 SS S STST +PK+ K +RKT S P T Sbjct: 5834231 SSS---------SSSTSTQEEVEPKKSKGKRKTNSSSSSIPTT 5834332 Score = 27.7 bits (60), Expect = 5.2 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 10/107 (9%) Frame = -2 Query: 50 QKLPQNFTRAGTSNHSTVTDPDEIVRRQEAVTAARL----------RMQEELNAQAELYK 99 QKL Q +G+SN + + P TAA Q++ + + K Sbjct: 5783401 QKLEQELKASGSSNSGSTSSPPTTTTTTTKTTAATTTATTSPLTIPSQQQQTATTSPIKK 5783222 Query: 100 QKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTSTSAAT 146 + ++ +EE Q + T KE K A P+ + +T++AT Sbjct: 5783221 KWSLEEEEETAQPLVNTNIEQKEIKLPPTA----NIPAAAATTTSAT 5783093 Score = 27.7 bits (60), Expect = 5.2 Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +3 Query: 86 RMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRL-GQEPSPST 140 + QEEL Q + K++++QLQ+++ Q+ + + ++ + + +L Q+ SPS+ Sbjct: 4207032 QQQEELKQQLQQSKKQKLQLQQQQLQQQQQQLQQQQQQQQQQQQQQLQQQQQSPSS 4207199 Score = 27.7 bits (60), Expect = 5.2 Identities = 15/82 (18%), Positives = 38/82 (46%) Frame = -3 Query: 75 RRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQ 134 ++Q+ + + Q++ Q + +QKQ +L E+R + + + + K K Q Sbjct: 2082177 QQQQQQQQQQQQQQQQQQQQQQQQQQKQPKLPREQRAKQAKPPQQPQHPKQPKQPNEQQQ 2081998 Query: 135 EPSPSTSTSAATKPKQEKQERK 156 +P + +Q++Q+++ Sbjct: 2081997 QPKQQQQQQQQQQQQQQQQQQE 2081932 Score = 27.3 bits (59), Expect = 6.8 Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Frame = +3 Query: 23 LQNTVGVVLSSYGWYILLGCILIYLLIQK------LPQNFTRAGTSNHSTVTDPDEIVRR 76 L NT+ ++ YG+Y + C L+I+ +P +F +N++ + + Sbjct: 1234014 LNNTIIIINIGYGFYDIKKCTFSQLIIKNYNNITFIPYDFNNENNNNNNNNNNKIVLKNT 1234193 Query: 77 QEAVTAARLRMQEEL 91 +T + + Q E+ Sbjct: 1234194 YLIITNSTINFQNEI 1234238 Score = 27.3 bits (59), Expect = 6.8 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = -3 Query: 71 DEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKE 122 DEI Q+A A + +Q E QA QKQ+++Q++ Q+ ++ + K+ Sbjct: 1133067 DEIFVEQQAQYAQQQLLQNEQALQA----QKQLEIQQQVAQQRLQQLKQQKQ 1132924 Score = 26.9 bits (58), Expect = 8.9 Identities = 14/69 (20%), Positives = 35/69 (50%) Frame = -2 Query: 88 QEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTSTSAATK 147 Q + Q + Q+ QLQ+EK+++ + + ++ + ++ + Q+P + Sbjct: 1981786 QPQQQEQPQQQPQQPQQLQQEKQEQQPQQEQQPQQEQQTQQQPQQPQQPQQPQQPQQPHQ 1981607 Query: 148 PKQEKQERK 156 +Q+KQE++ Sbjct: 1981606 EQQQKQEQQ 1981580 >gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole genome shotgun sequence Length = 4923596 Score = 30.4 bits (67), Expect = 0.81 Identities = 22/93 (23%), Positives = 39/93 (41%) Frame = +3 Query: 61 TSNHSTVTDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRM 120 T N + D E ++ E +T + +++ Q QLQEE++Q+N+E Sbjct: 1184871 TDNDNDSDDSIESEKKDEIITNGTTQTEQQQPTQ---------QLQEEQQQQNVE----- 1185008 Query: 121 KEGKSSKVACRLGQEPSPSTSTSAATKPKQEKQ 153 + K+A E T T T+ + E + Sbjct: 1185009 ---QEKKIATETETETETETETETETETETETE 1185098 Score = 30.4 bits (67), Expect = 0.81 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 5/71 (7%) Frame = -2 Query: 46 YLLIQKLPQNFTRAGTSNHSTVTDPDEIVRRQEA-----VTAARLRMQEELNAQAELYKQ 100 YL Q+ Q+ + + TS ST T + ++ + VTA + Q+++ Q +L +Q Sbjct: 676672 YLNQQQQQQSSSTSSTSTISTSTPQQQQQQQSQPLPPPIVTAGGIIHQQQIQQQQQLQQQ 676493 Query: 101 KQVQLQEEKRQ 111 +Q QLQ ++ Q Sbjct: 676492 QQQQLQLQQLQ 676460 Score = 30.4 bits (67), Expect = 0.81 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 18/109 (16%) Frame = +2 Query: 68 TDPDEIVRRQEAVTAAR-------------LRMQEELNAQAELYKQ-KQVQLQEEKRQRN 113 TD DE+ R + + AR ++ +E + EL KQ K+V +E+ N Sbjct: 4753919 TDDDEVFRHLKEASTARKIVEIHLDEIEFGVKQKERRTERNELQKQLKEVNNKEKFENNN 4754098 Query: 114 IETWDRMK----EGKSSKVACRLGQEPSPSTSTSAATKPKQEKQERKTL 158 + + K + ++ K ++ ++PS ST+T+ + + K E K + Sbjct: 4754099 NDNNNNNKTKTTKPENKKEITKIQEQPSKSTTTTKSIEKKPTTIESKKI 4754245 Score = 28.5 bits (62), Expect = 3.1 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Frame = -2 Query: 72 EIVRRQEAVTAARLRMQEELNAQAELYKQKQVQ----LQEEKRQRNIETWDRMKEGKSSK 127 ++V + RLRM+ +LN++ KQK Q +++E ++++E++ + G + Sbjct: 1325686 KMVGKYHVAKQNRLRMKAKLNSRVSEIKQKMAQNKKNIKKESAKKSVESFAKAVLGNRAN 1325507 Query: 128 VACRLGQEPSPSTSTSAATKPKQE 151 + G S ST + T + E Sbjct: 1325506 NS-NTGNVASTSTIPTQVTTTRTE 1325438 Score = 28.1 bits (61), Expect = 4.0 Identities = 17/100 (17%), Positives = 46/100 (46%) Frame = +1 Query: 57 TRAGTSNHSTVTDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIET 116 T S + +T I ++ + A+L+ Q+ + +Q+Q Q Q++++Q+ + Sbjct: 472444 TAITASEMALMTTNRFIREKKNQMLQAQLQAQQRAQMSQQQQQQQQQQQQQQQQQQQQQQ 472623 Query: 117 WDRMKEGKSSKVACRLGQEPSPSTSTSAATKPKQEKQERK 156 + ++ + + + Q+P +P+Q +Q ++ Sbjct: 472624 QQQQQQQQQQQQQQQQQQQPQQPQQPQQLQQPQQLQQPQQ 472743 Score = 28.1 bits (61), Expect = 4.0 Identities = 15/57 (26%), Positives = 30/57 (52%) Frame = +1 Query: 85 LRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTS 141 L+ Q++L Q + +Q+Q Q Q++++++ + + + KV P PSTS Sbjct: 4470430 LQQQKQLEQQQQQQQQQQQQQQQQQQKQQQQQQQQQQSVIEEKVIQTSPPPPPPSTS 4470600 Score = 27.3 bits (59), Expect = 6.8 Identities = 13/73 (17%), Positives = 37/73 (50%) Frame = +1 Query: 84 RLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTSTS 143 R +M ++ Q + +Q+Q Q Q++++Q+ + + ++ + + + Q+P Sbjct: 472543 RAQMSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQPQQLQQPQ 472722 Query: 144 AATKPKQEKQERK 156 +P+Q +Q ++ Sbjct: 472723 QLQQPQQLQQPQQ 472761 Score = 27.3 bits (59), Expect = 6.8 Identities = 13/53 (24%), Positives = 28/53 (52%) Frame = +1 Query: 89 EELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTS 141 +++ + E +++Q QLQ ++Q+ + R +S + G + +PSTS Sbjct: 3439744 KQIEEEEEEERERQSQLQSSQQQQKSSSTQRSSNTVTSTSSSSTGGDSNPSTS 3439902 >gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromosome 6, whole genome shotgun sequence Length = 3602379 Score = 29.3 bits (64), Expect = 1.8 Identities = 17/80 (21%), Positives = 41/80 (51%) Frame = +1 Query: 77 QEAVTAARLRMQEELNAQAELYKQKQVQLQEEKRQRNIETWDRMKEGKSSKVACRLGQEP 136 Q+ T + +Q++ N Q + Y+Q+ QLQ+ ++Q+ + + ++ + + + Q Sbjct: 237040 QQQHTQQQTTIQQQQNQQHQ-YQQQYQQLQQLQQQQQQQQQQQQQQQQQQQQQQQQQQSS 237216 Query: 137 SPSTSTSAATKPKQEKQERK 156 SP + S ++P+ R+ Sbjct: 237217 SPPSPPSPQSQPQNSSSPRQ 237276 Score = 27.3 bits (59), Expect = 6.8 Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 6/58 (10%) Frame = -1 Query: 71 DEIVRRQEAVTAARLRMQEELNAQAELY------KQKQVQLQEEKRQRNIETWDRMKE 122 D+I++ + L++Q++ Q +L KQKQ QLQ+E+ Q+ + +++ + Sbjct: 2722245 DQIIKSHKVEEDLILKLQKQRQRQLQLEQEQEQEKQKQQQLQQEQEQQQQQQQEQIPQ 2722072 Score = 26.9 bits (58), Expect = 8.9 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -3 Query: 130 CRLGQEPSPSTSTSAATKPKQEKQERKTL 158 C+L PS S+STS+++ P+ E ++ Sbjct: 3393649 CKLSLSPSSSSSTSSSSSPESSSPESSSI 3393563 Score = 26.9 bits (58), Expect = 8.9 Identities = 9/20 (45%), Positives = 16/20 (80%) Frame = +1 Query: 108 EKRQRNIETWDRMKEGKSSK 127 +K++RNI++WD+ K+ K K Sbjct: 484936 KKKKRNIKSWDKKKKKKKKK 484995 Score = 26.9 bits (58), Expect = 8.9 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 30/112 (26%) Frame = +1 Query: 88 QEELNAQAELYKQKQVQLQE---EKRQRNIETWDRMKEGKSSKVACRLGQEPSPS----- 139 +E+ Q E K+K +L+E EK+++N E+ K KS K + S S Sbjct: 796204 KEKAKKQKEKEKEKAKKLKEKEKEKKKKNSESEKPKKSNKSKKQEDTENESESESESESE 796383 Query: 140 --------------------TSTSAATKP--KQEKQERKTLRGSGYNPLTGD 169 T+T +KP K +KQE + SG + +GD Sbjct: 796384 SSSSESEKEESSKKSSSKKKTTTKEKSKPTKKSKKQETEDEEESGSDESSGD 796539 >gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromosome 5, whole genome shotgun sequence Length = 5125352 Score = 28.9 bits (63), Expect = 2.3 Identities = 23/119 (19%), Positives = 53/119 (44%), Gaps = 3/119 (2%) Frame = +3 Query: 49 IQKLPQNFTRAGTSNHSTV---TDPDEIVRRQEAVTAARLRMQEELNAQAELYKQKQVQL 105 +Q+ Q +++ +N++ +P ++ +E + ++ LN+ +L KQ + Sbjct: 2686983 VQQQQQQSSKSKPNNNNNKFVDNNPYAVLEEEERALQSAIKASLLLNSPVDL-DSKQQNV 2687159 Query: 106 QEEKRQRNIETWDRMKEGKSSKVACRLGQEPSPSTSTSAATKPKQEKQERKTLRGSGYN 164 ++K+Q+ + SSK + + +TST+ A K+ K+ + S N Sbjct: 2687160 SQQKQQQEQQPTTTTNSVSSSKSKSVATTDKNRTTSTAVAPTTSSNKKANKSNKTSTAN 2687336 Score = 28.1 bits (61), Expect = 4.0 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = +1 Query: 136 PSPSTSTSAATKPKQEKQER---KTLRGSGYNPLT 167 PSPS STS +T K + T G+GYN T Sbjct: 1395733 PSPSPSTSTSTSTSSNKTDNTTTTTTNGNGYNSNT 1395837 Database: D.discoideum_AX4/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 33,943,072 Number of sequences in database: 6 Lambda K H 0.312 0.130 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,224,154 Number of Sequences: 6 Number of extensions: 69490 Number of successful extensions: 609 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 233 Number of HSP's gapped (non-prelim): 558 length of query: 187 length of database: 11,314,357 effective HSP length: 95 effective length of query: 92 effective length of database: 11,313,787 effective search space: 1040868404 effective search space used: 1040868404 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 58 (26.9 bits)