TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|315113844|ref|NP_001186679.1| selenoprotein S [Taeniopygia guttata] (189 letters) Database: D.discoideum_AX4/genome.fa 6 sequences; 33,943,072 total letters Searching......done Score E Sequences producing significant alignments: (bits) Value gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso... 37 0.012 gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromoso... 36 0.015 gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromoso... 34 0.075 gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso... 33 0.17 gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromoso... 32 0.22 gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromos... 32 0.28 >gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole genome shotgun sequence Length = 6357299 Score = 36.6 bits (83), Expect = 0.012 Identities = 21/86 (24%), Positives = 43/86 (50%) Frame = -2 Query: 71 EPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKG 130 EP+V ++ E +++ R Q+E Q +K KEK+++ E+E+ ++K E +E + K Sbjct: 2078185 EPEVDEQKVEEKKSSKKRKQKEKQKQRQKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKE 2078006 Query: 131 NLKLNQEVESAASSASAVPKSKPNKK 156 K ++ + + K +K Sbjct: 2078005 KEKEKEKEKGKGKEREREREEKEKEK 2077928 Score = 35.8 bits (81), Expect = 0.020 Identities = 16/61 (26%), Positives = 38/61 (62%) Frame = +2 Query: 73 DVVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNL 132 +++ ++Q+ L + + Q++ Q ++ +++Q++ EEE+++++ E QE S K NL Sbjct: 476192 NIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNL 476371 Query: 133 K 133 K Sbjct: 476372 K 476374 Score = 32.3 bits (72), Expect = 0.22 Identities = 18/72 (25%), Positives = 38/72 (52%) Frame = +2 Query: 101 KEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKKPLRG 160 +++Q+Q ++++++Q+ + Q+ + + N + NQ+ + K KP+KKP Sbjct: 3378383 QQQQQQQQQQQQQQQQRQPQQPQQPQPQQQNQQQNQQQNQQPKKSQNDDKPKPDKKP--K 3378556 Query: 161 GGYNPLSGEGGG 172 G Y+ GGG Sbjct: 3378557 GSYSKGGSVGGG 3378592 Score = 30.4 bits (67), Expect = 0.82 Identities = 23/74 (31%), Positives = 36/74 (48%) Frame = -3 Query: 91 EELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPK 150 E+ + EK+ EKQR+ E+ R+ +QE + K +E+E + K Sbjct: 5912997 EKKRIEKEKHIEKQRKEFEKERK--------IQEKEKNK-----QEEIEKKEKLKQEMKK 5912857 Query: 151 SKPNKKPLRGGGYN 164 SKP+KK L+ YN Sbjct: 5912856 SKPSKKDLQLIKYN 5912815 Score = 30.4 bits (67), Expect = 0.82 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1 Query: 70 EEPDVVVRRQEALAAARLRMQEELNAQAEKYK-EKQRQLEEERRRQKIVMWESMQE 124 E+ +VVV ++ A +EE + E E+ +Q EEE+ + IV+ ES QE Sbjct: 903469 EKQEVVVEEEKQEVIAEEEEEEEEEKEEESIVIEESKQEEEEKEEESIVVDESKQE 903636 Score = 30.0 bits (66), Expect = 1.1 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = -3 Query: 86 RLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKS 127 R R +E + E+ ++KQ++LEE+++ K + ES +EG S Sbjct: 5531694 RRRAKERYLKKKEEEEQKQKELEEKQQPFKDIEGESEEEGSS 5531569 Score = 30.0 bits (66), Expect = 1.1 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = -3 Query: 41 AVAVYLLVQKVSRSLA-ARPGGRPGAAEAAEEPDVVVRRQEALAAARLRMQEELNAQAEK 99 A+ +Y V++SLA + P AE E D +R+E L + Q ++ Sbjct: 3426273 AIKLYGNFNTVNQSLANSTPKPTLAPAEVEIEDDPKKKREEKL---------KKTLQEKE 3426121 Query: 100 YKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQE 137 KEK++Q ERRR K +EGK + KL ++ Sbjct: 3426120 QKEKEKQERRERRRLK-------REGKEERTFKKLQEK 3426028 Score = 30.0 bits (66), Expect = 1.1 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 148 VPKSKPNKKPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG 187 +P+S+ KKP R Y+P GG G RG S GG Sbjct: 4440192 LPESETQKKPTRPRDYSPRRTRGGFRGGSSGGFRGGSGGG 4440311 Score = 28.5 bits (62), Expect = 3.1 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -2 Query: 51 VSRSLAARPGGRPGAAEAAEEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEE 110 +S L + GA + +E + ++Q+ R R +E EK KEK+R+ E E Sbjct: 6182461 ISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKERERERER-----EKEKEKERERERE 6182297 Query: 111 RRRQK 115 RR ++ Sbjct: 6182296 RREKE 6182282 Score = 28.5 bits (62), Expect = 3.1 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = +3 Query: 90 QEELNAQAEKYKEKQRQLEEERR--RQKIVMWESMQEGKSYKGNLKLNQEVESAASS 144 QE L+ Q E KEK+RQLE+E R++++ E + + + + NQ ++ +SS Sbjct: 1446510 QELLSKQIELEKEKERQLEKEIELGRERLIRGEKNFQKQFEQQDKLQNQSQKNNSSS 1446680 Score = 28.5 bits (62), Expect = 3.1 Identities = 18/78 (23%), Positives = 34/78 (43%) Frame = +1 Query: 90 QEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVP 149 ++E + EK KEK+ + EEE +K + ++ + K ++ S+ S + P Sbjct: 5099881 EKEKEKEKEKEKEKEEEGEEEDNSKKKKKKQKIEPDQPIKNSIPKKPPTTSSRKSKNKPP 5100060 Query: 150 KSKPNKKPLRGGGYNPLS 167 + N + NP S Sbjct: 5100061 NNNNNNCNILLNFLNPTS 5100114 Score = 27.7 bits (60), Expect = 5.3 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = -2 Query: 147 AVPKSKPNKKPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGGXG 189 ++ SKP P GGG L G GGG P G GG G Sbjct: 1906441 SIEDSKPFLLPSAGGGGEDLGGGGGG----GPEDLGGGGGGGG 1906325 Score = 27.3 bits (59), Expect = 7.0 Identities = 9/37 (24%), Positives = 27/37 (72%) Frame = -2 Query: 88 RMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQE 124 +++++ Q ++ +++Q+QLE+++++QKI + Q+ Sbjct: 3960754 QIKQQQQPQQQQLQQQQKQLEQQQQQQKIQQQQQPQQ 3960644 Score = 26.9 bits (58), Expect = 9.1 Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 3/100 (3%) Frame = -2 Query: 68 AAEEPDVVVRRQEALAAARLRMQE---ELNAQAEKYKEKQRQLEEERRRQKIVMWESMQE 124 A ++ D + Q+ + + + +E E + E+ KEK+++ E ER R++ ++++ Sbjct: 6182440 ADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRS 6182261 Query: 125 GKSYKGNLKLNQEVESAASSASAVPKSKPNKKPLRGGGYN 164 S K+N S S+++ S N G G N Sbjct: 6182260 SFSNIPIPKINNINGSNGSNSNNNNNSNNN-----GSGVN 6182156 >gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromosome 5, whole genome shotgun sequence Length = 5125352 Score = 36.2 bits (82), Expect = 0.015 Identities = 21/80 (26%), Positives = 40/80 (50%) Frame = +1 Query: 77 RRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQ 136 ++Q+ RLR +EE Q + +EKQRQ++EE ++ + E +E + K L+ + Sbjct: 633220 QKQQQEGQERLRKEEEEQQQQRELEEKQRQIDEEEAEEEARIRELEEEARKSKERLEKAR 633399 Query: 137 EVESAASSASAVPKSKPNKK 156 + A + K + K+ Sbjct: 633400 LDKLAKAQKEREDKEREEKE 633459 Score = 31.6 bits (70), Expect = 0.37 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = +2 Query: 67 EAAEEPDVVVRRQEALAAARLRMQEELN-AQAEKYKEKQRQLEEERRRQKIVMWESMQEG 125 E E + +Q+ + R+ E N + EK KEK+R+ +++ ++ WE+++E Sbjct: 3545849 EKEREKQREIEKQKRIEIENQRIIETENQTKREKEKEKERESQKQNEIKRKREWEAVKET 3546028 Query: 126 KSYKGNLKLNQEVES 140 K +K +E E+ Sbjct: 3546029 VILKNEIKRKREWEA 3546073 Score = 31.6 bits (70), Expect = 0.37 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = -1 Query: 78 RQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWE---SMQEGKSYK 129 ++E A R +++ QAEK+K+ + +E +++K +M E QE KSYK Sbjct: 388760 KKETKGALREIVKDNQFIQAEKFKKATEERKENEKKRKQIMSELQSEQQEHKSYK 388596 Score = 30.0 bits (66), Expect = 1.1 Identities = 14/43 (32%), Positives = 28/43 (65%) Frame = +3 Query: 89 MQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGN 131 +++ L+ ++E Y EKQRQLE +R R ++ E++ + +G+ Sbjct: 1156038 IEDRLDRESE-YLEKQRQLENQRNRINLLREEALTQQNQLQGD 1156163 Score = 29.6 bits (65), Expect = 1.4 Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +3 Query: 55 LAARPGGRPGAAEAAEEPDVVVRRQEALA-AARLRMQEELNAQAEKYKEKQRQLEEERRR 113 LAAR G + + +AA + + EA + RMQ + +++ E++++ EEER++ Sbjct: 494586 LAARSGWKH-SVQAAAFGGIFIGIIEAFQHMMQKRMQAQQEEMTQQHLEERKRYEEERKQ 494762 Query: 114 QKIVMWESMQEGKSYKGNLKLNQE 137 ++ + + GKS K + N E Sbjct: 494763 REGERKKLNENGKSKKNKQQQNGE 494834 Score = 29.6 bits (65), Expect = 1.4 Identities = 13/38 (34%), Positives = 25/38 (65%) Frame = +2 Query: 77 RRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQ 114 ++Q+ +AAA +L + EK KEK+++ E+E++ Q Sbjct: 4679918 KKQQEIAAAAAVADLKLKQEKEKEKEKEKEKEKEKQSQ 4680031 Score = 28.9 bits (63), Expect = 2.4 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = +1 Query: 63 PGAAEAAEEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESM 122 P P + +Q+ L ARL ++ + E K++Q + EEE +R + + Sbjct: 633055 PKPTPVPRTPQLEKEKQDRLEKARLEKEKAEKEEQEFLKQQQEE-EEEEQRLLLEQQKQQ 633231 Query: 123 QEGK 126 QEG+ Sbjct: 633232 QEGQ 633243 Score = 28.5 bits (62), Expect = 3.1 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = -1 Query: 99 KYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKKP 157 K KEK+++ +++++++K + KSY K+ +E PK KP KP Sbjct: 1481840 KKKEKRKKKKKKKKKKKNFLIFKSVNFKSYTNLFKIKLTLEINPL*IKPKPKPKPKPKP 1481664 Score = 28.1 bits (61), Expect = 4.1 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = +1 Query: 90 QEELNAQAEKYKEKQRQLEEERRRQK----IVMWESMQEGK--SYKGNLKLNQEVESAAS 143 +EEL + + KEK+++ ++E+ + K + E +E + + K NLK +E E Sbjct: 3159568 KEELKDKTKNNKEKEKEKDKEKEKVKEKDDTELKEETKENEKLNRKNNLKNKKEQEEIVK 3159747 Query: 144 SASAVPKSKPNKK 156 + K + +K Sbjct: 3159748 ENKEIDKKEKKRK 3159786 Score = 26.9 bits (58), Expect = 9.1 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +1 Query: 76 VRRQEALAAARLRMQEELNAQAEKY-KEKQRQLEEERRRQKI 116 + R+ L R R+++E + E+ KEK++QLE ER + ++ Sbjct: 1127746 LERERELERERERIEKEKLLERERERKEKEKQLEREREQLRL 1127871 >gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromosome 4, whole genome shotgun sequence Length = 5450249 Score = 33.9 bits (76), Expect = 0.075 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 17/109 (15%) Frame = +3 Query: 65 AAEAAEEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQR-----------------QL 107 A +E + +R+++ + A RLR+QEE E+ E+ R Q Sbjct: 2554578 ALRLQKEQEERIRKEKEIEAERLRVQEEERLAKERQAEEDRMRAVEEEKLKLMEAEIKQR 2554757 Query: 108 EEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKK 156 EE+ RRQKI E ++ + + LK Q+ S S+ A ++ K+ Sbjct: 2554758 EEDIRRQKIEE-EERRKREEQEKKLKDQQDKASQESARLAQEAARAQKR 2554901 Score = 30.0 bits (66), Expect = 1.1 Identities = 21/90 (23%), Positives = 40/90 (44%) Frame = +1 Query: 92 ELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKS 151 +L+ +K++ + EEE++++K ++ +S + + S + S+S S Sbjct: 1965814 KLDIDLKKFETELESAEEEKKKKKSKQSQNNSTVESSTTSSSSSSSSSSLSLSSSTNNTS 1965993 Query: 152 KPNKKPLRGGGYNPLSGEGGGTCSWRPGRR 181 N GGG + G GGG S G + Sbjct: 1965994 SLNSSSGGGGGGSGGGGGGGGHSSHSTGNK 1966083 Score = 28.5 bits (62), Expect = 3.1 Identities = 22/80 (27%), Positives = 37/80 (46%) Frame = +2 Query: 74 VVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLK 133 V ++R+EA ++EL + ++ KE R LEEERR + E ++ K Sbjct: 148691 VQIQRKEA-------KRQELENKLKELKEHNRNLEEERR----IAIEKIEN--------K 148813 Query: 134 LNQEVESAASSASAVPKSKP 153 Q+ + SS + +P P Sbjct: 148814 YKQQTTTTTSSGNQIPPPPP 148873 Score = 28.1 bits (61), Expect = 4.1 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +3 Query: 78 RQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQE 137 RQEAL R R+Q + EKQ LE+E ++Q ++E ++ + K L+ ++ Sbjct: 1593855 RQEALLEERKRLQGIETEKKRILAEKQEALEKEFQQQ---LFEQQEKERLEKERLEKEEQ 1594025 Query: 138 VESAA 142 + A+ Sbjct: 1594026 LRLAS 1594040 Score = 27.7 bits (60), Expect = 5.3 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 12/88 (13%) Frame = -2 Query: 91 EELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLN------------QEV 138 +E EK KEK+++ E+E+ + + + ++GKS + K N Q + Sbjct: 4628539 KEKEKDKEKEKEKEKKKEKEKLKLEEKKKKKEEKGKSKSKDSKKNKIKGIEFEVEPQQLI 4628360 Query: 139 ESAASSASAVPKSKPNKKPLRGGGYNPL 166 + SS S KP+K+ L+ Y+ + Sbjct: 4628359 TKSDSSDSLQSLEKPSKELLKQQFYDTI 4628276 Score = 27.7 bits (60), Expect = 5.3 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +3 Query: 98 EKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQE 137 EK KEK+++ E+E+ ++K E +E + K K N+E Sbjct: 1070721 EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKENEE 1070840 Score = 27.7 bits (60), Expect = 5.3 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%) Frame = +3 Query: 70 EEPDVVVRRQEALAAARLRMQEELNAQAEKYK--EKQRQL------EEERRRQKIVMWES 121 EE + + QEA+ RL + A+AEK + E+QR + E+ER +Q + Sbjct: 2554323 EEAEKLRLAQEAMEKLRLEQEAAAAAEAEKIRLAEEQRIIKEKEVAEQERIKQLTEQQKQ 2554502 Query: 122 MQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKKPLR 159 +E ++ K +E A A+ K ++ +R Sbjct: 2554503 KEEEEAKIALEKAKKEEAERLEKAEALRLQKEQEERIR 2554616 Score = 27.7 bits (60), Expect = 5.3 Identities = 13/63 (20%), Positives = 32/63 (50%) Frame = +1 Query: 97 AEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKK 156 + + +++Q+Q +++ + + SM +SYK + L+ ++ S S + +K Sbjct: 4177915 SSQQQQQQQQQQQQHSNKPSMEHHSMSLSESYKQKVVLSNDINEHGSQGSDNHSNTTSKP 4178094 Query: 157 PLR 159 P+R Sbjct: 4178095 PVR 4178103 Score = 27.7 bits (60), Expect = 5.3 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Frame = +1 Query: 90 QEELNAQAEKYKEKQRQ----LEEERRRQKIVMWESMQEGKSYKGNLKLNQEVE 139 QEE + E KEK++Q ++E +QK + E +++ + K N K QE E Sbjct: 4612096 QEEEQLEKENEKEKEQQEIIEKQKEIEKQKEIEKEKVKQKEQEKKNEKERQEKE 4612257 Score = 27.3 bits (59), Expect = 7.0 Identities = 16/77 (20%), Positives = 38/77 (49%) Frame = +3 Query: 86 RLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSA 145 ++++++ N Y+E++R EEE ++ V + Q+ K+ K LK ++ + Sbjct: 4634709 KVKIKKNKNKNDSDYEEEER--EEEEEEEEKVKIKKNQKSKTKKNKLKKSELFKGFNFIV 4634882 Query: 146 SAVPKSKPNKKPLRGGG 162 + + +S + + GG Sbjct: 4634883 TGIQESDEISEMISNGG 4634933 Score = 26.9 bits (58), Expect = 9.1 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 133 KLNQEVESAASSASAVPKSKPNKKPLRGGGYN 164 K+N+ SA S S+ P S+P KP++ N Sbjct: 2381166 KINKSPISATQSPSSSPLSQPKSKPIQNNNDN 2381261 >gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole genome shotgun sequence Length = 4923596 Score = 32.7 bits (73), Expect = 0.17 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 17/89 (19%) Frame = +2 Query: 91 EELNAQAEKYKEKQRQLEE-----------------ERRRQKIVMWESMQEGKSYKGNLK 133 EEL++Q +K K++ +E + ++Q+++ + Q+ + + L+ Sbjct: 2834996 EELDSQFDKLSSKKKPFDEGISEEEDSYFSINTYMLQSKQQQLLQQQQQQQQQQQQLLLQ 2835175 Query: 134 LNQEVESAASSASAVPKSKPNKKPLRGGG 162 Q+ S S+ PNK P+ GGG Sbjct: 2835176 QQQQQTQPNSLKSSTSSITPNKSPISGGG 2835262 Score = 30.0 bits (66), Expect = 1.1 Identities = 14/48 (29%), Positives = 29/48 (60%) Frame = -3 Query: 77 RRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQE 124 +RQ+ +L+ +EEL + ++ ++K+R+ EER +Q+ E Q+ Sbjct: 4681737 QRQKEKEELKLKEKEELKLKEKEKRKKEREEREEREKQEKQEQEQQQQ 4681594 Score = 28.9 bits (63), Expect = 2.4 Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 3/119 (2%) Frame = -3 Query: 47 LVQKVSRSLAARPGGRPGAAEAAEEPDVVVRRQEALAAARLRMQEE---LNAQAEKYKEK 103 LV K + +L G + A E V ++Q L A ++Q E L Q ++KE Sbjct: 4196655 LVDKSTEALTMATGDQKDTMAAERE---VQKKQGELEAQAAKLQSEIADLKEQVAEFKEL 4196485 Query: 104 QRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKKPLRGGG 162 + +E Q+ + G K +L + SAAS A + L GGG Sbjct: 4196484 AEKAGKEAAEQRKIGMILQIVGAVTKPLAQLAGPIISAASGAGVAGSAGKILGNLTGGG 4196308 Score = 27.7 bits (60), Expect = 5.3 Identities = 14/72 (19%), Positives = 35/72 (48%) Frame = +1 Query: 70 EEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYK 129 E PD +V + +++ + ++ KEK+++ +E+++ +K + +E K K Sbjct: 3810211 ENPDPIVDTPPITFSTETDSKKQKKEKKKEEKEKKKEEKEKKKEEKEEKKKEKEEKKKLK 3810390 Query: 130 GNLKLNQEVESA 141 ++ E+A Sbjct: 3810391 KEASFTKQQENA 3810426 Score = 27.3 bits (59), Expect = 7.0 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 12/81 (14%) Frame = +2 Query: 71 EPDVVVRRQEALAAARLRMQEELNAQAE--------KYKEKQRQLEEER--RRQKIVMWE 120 E + R E L L ++EE Q + K +EKQRQL++E+ +++K+ E Sbjct: 1119620 EQQEIDRHNEELLKYELAIKEEKRKQQQLIERYEQKKREEKQRQLQQEQKEKQEKLEKEE 1119799 Query: 121 SMQEGKSYKGNL--KLNQEVE 139 +E + + L KL +E E Sbjct: 1119800 KEKEQQEQQKQLLIKLAKEKE 1119862 Score = 27.3 bits (59), Expect = 7.0 Identities = 18/63 (28%), Positives = 27/63 (42%) Frame = +1 Query: 99 KYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKKPL 158 K+ E++ + E+E +K + K K K +E E PKSK NKK Sbjct: 1264327 KHVEEEEEQEQEEEEEK----PKSKSNKKDKKKGKHVEEEEEEEEEEEEKPKSKSNKKDK 1264494 Query: 159 RGG 161 + G Sbjct: 1264495 KKG 1264503 Score = 27.3 bits (59), Expect = 7.0 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Frame = -2 Query: 66 AEAAEEPDVVVRRQEALAAARLRMQEELN------AQAEK---YKEKQRQLEEERRRQKI 116 AEAA + EA AAA +E L AQAEK KE+ +LE+ER + Sbjct: 2113738 AEAAAAAQAEKEKLEAEAAAAQAEKERLEAEAAAAAQAEKERLEKEETERLEKERLEAEA 2113559 Query: 117 VMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNK 155 ++ +E + E E + A+A ++ K Sbjct: 2113558 AAAQAEKERLEAEAAAAAQAEKERLEAEAAAEKAAEETK 2113442 Score = 27.3 bits (59), Expect = 7.0 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = -3 Query: 95 AQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPN 154 +++ + KEK+ Q E ERR ++ + E K K K +E E + K Sbjct: 356013 SKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDK 355834 Query: 155 KK 156 KK Sbjct: 355833 KK 355828 Score = 26.9 bits (58), Expect = 9.1 Identities = 15/54 (27%), Positives = 24/54 (44%) Frame = +3 Query: 115 KIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPKSKPNKKPLRGGGYNPLSG 168 K VMW S ++ K K K N++++ K NKK ++ N + G Sbjct: 695049 KFVMWTSEKKIKK*KNKKKKNEKIQRGKIPKDFFFKKIKNKKKIKKNEKNGIEG 695210 Score = 26.9 bits (58), Expect = 9.1 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 21/121 (17%) Frame = -2 Query: 65 AAEAAEEPD-------VVVRRQEALAA--ARLRMQEELNAQAEKYKEKQR-------QLE 108 AAEAA++ + V +E LAA A+ +E L A+A K +E++R + E Sbjct: 2745391 AAEAAKKEEERLAAEAVKKEEEERLAAEVAKKAEEERLTAEAAKKEEEERLAAEAAKKAE 2745212 Query: 109 EERRRQKIVMWESMQ-----EGKSYKGNLKLNQEVESAASSASAVPKSKPNKKPLRGGGY 163 EER + E + K+ + L +E + A +AV K ++ L Sbjct: 2745211 EERLAAEAAKKEEERLAAEAAKKAEEERLAAEKEAKRIAEEVAAVAAKKAEEERLAAEAE 2745032 Query: 164 N 164 N Sbjct: 2745031 N 2745029 >gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromosome 6, whole genome shotgun sequence Length = 3602379 Score = 32.3 bits (72), Expect = 0.22 Identities = 21/97 (21%), Positives = 45/97 (46%) Frame = -2 Query: 91 EELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVPK 150 E + Q ++ ++Q+Q ++++++Q+ + Q+ + + + LNQ ++ S Sbjct: 3585545 ELIEKQQDQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHRTLNQSFQNTIVSYCLRLI 3585366 Query: 151 SKPNKKPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG 187 + KP+ G G N + GG + G S GG Sbjct: 3585365 DQSKLKPIDGSGNNNSNLNGGNS-----GNSNSSGGG 3585270 Score = 31.6 bits (70), Expect = 0.37 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +1 Query: 77 RRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQ 136 + Q+ L+ ++E + E+ +EKQ+QLE++ + QK E Q+ K K K + Sbjct: 1773958 KEQQQKEKDELKKRQEKQLEKERQQEKQQQLEQKEKDQK----EKDQKEKEQKE--KEQK 1774119 Query: 137 EVESAASSASAVPKSKPNKK 156 E E A K K K+ Sbjct: 1774120 EKEKAKKLKQQEQKEKEEKE 1774179 Score = 31.6 bits (70), Expect = 0.37 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = +3 Query: 98 EKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLK 133 EK KEK+++ E+E+ ++K + ++GK KGN K Sbjct: 2836215 EKEKEKEKEKEKEKEKEKKKKRKKERKGKEKKGNQK 2836322 Score = 31.2 bits (69), Expect = 0.48 Identities = 14/45 (31%), Positives = 26/45 (57%) Frame = +1 Query: 90 QEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKL 134 ++E + EK KEK+++ E+E+ ++K E K+Y N K+ Sbjct: 2373919 EKEKEKEKEKEKEKEKEKEKEKEKEKEKEKNKEIENKTYPNNCKI 2374053 Score = 29.3 bits (64), Expect = 1.8 Identities = 15/59 (25%), Positives = 36/59 (61%), Gaps = 5/59 (8%) Frame = +1 Query: 88 RMQEELNAQAEKYKEKQRQLEEER-----RRQKIVMWESMQEGKSYKGNLKLNQEVESA 141 ++++E + K ++ + QLEEER +++++ E ++ + Y+ +L+L +E +SA Sbjct: 1771228 KLKQERELEIRKQQQLEHQLEEERKQEQKKKKELDDQEWKRKEQQYQSDLQLEKEKQSA 1771404 Score = 28.5 bits (62), Expect = 3.1 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +1 Query: 67 EAAEEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQ-RQLEEERRRQKIVMWESMQEG 125 E EE D + ++ + + Q++ Q +K KEKQ R+ +EER ++ E +E Sbjct: 1771945 EEKEEKDKKDKEEKEKQELKKKQQQQ---QQQKEKEKQERKEKEEREEREKEEREEREER 1772115 Query: 126 KSYKGNLKLNQE 137 + + LKL Q+ Sbjct: 1772116 EEKERELKLKQQ 1772151 Score = 28.5 bits (62), Expect = 3.1 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%) Frame = +3 Query: 51 VSRSLAARPGGRPG-----AAEAAEEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQR 105 VS +A G +P EAA+ + +R E +A + E+ + E ++ Sbjct: 2200650 VSHFFSANTGDKPSYKFLFEKEAADRAEEERKRAERIAKEEAILAEKRKQIQKAKLEAKK 2200829 Query: 106 QLEEERRRQKIVMWE---SMQEGKSYKG 130 + E ERR+++ WE +MQE K+ KG Sbjct: 2200830 KREIERRKREEEEWEEYLAMQE-KTTKG 2200910 Score = 28.5 bits (62), Expect = 3.1 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Frame = -3 Query: 70 EEPDVVVRRQEALAAARLRMQEELNAQAEKYKEK--QRQLEEERRRQKIVM--WESMQEG 125 EEP+ ++E QEE Q E+ +EK +++ EEE+ KI E +E Sbjct: 332278 EEPEEQEEQEEQEEQEEQEEQEEQVEQVEQIEEKEQEQEKEEEQEEDKITFNNNEEEEEE 332099 Query: 126 KSYKGNLKLNQEVESAASSASAVPKSKPNKKPL 158 + G+ ++ VE PK K N++ L Sbjct: 332098 EEEDGDDDKDENVEKK-------PKGKTNEQLL 332021 Score = 28.1 bits (61), Expect = 4.1 Identities = 17/70 (24%), Positives = 37/70 (52%) Frame = +2 Query: 70 EEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYK 129 E+ ++VV + + Q++ Q ++ +++Q + EEE +Q+I E +EG+ + Sbjct: 2976656 EKQEIVVDELKNKKDEEKQQQQQEEDQQQQQQQQQEEEEEEEEQQEIEEDEEEEEGQEQE 2976835 Query: 130 GNLKLNQEVE 139 + QE+E Sbjct: 2976836 EE-EEQQEIE 2976862 Score = 27.7 bits (60), Expect = 5.3 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = -3 Query: 78 RQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQE 137 +QE + + QEE Q E+ ++++ Q EEE++ ++ + Q+ + +G + QE Sbjct: 298135 QQEEQQQEQQQQQEEEQQQQEEQQQQEEQQEEEQQEEE----QQEQQEEQQQGEQQEQQE 297968 Query: 138 VE 139 E Sbjct: 297967 EE 297962 >gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromosome 2, whole genome shotgun sequence Length = 8484197 Score = 32.0 bits (71), Expect = 0.28 Identities = 15/63 (23%), Positives = 33/63 (52%) Frame = +3 Query: 77 RRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQ 136 R++ + M+ E + EK KEK+++ E+E+ ++K E +E + + ++ Sbjct: 564888 RKEREEREKEIEMEREKKKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKKRKENEVEN 565067 Query: 137 EVE 139 E+E Sbjct: 565068 EIE 565076 Score = 31.2 bits (69), Expect = 0.48 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +1 Query: 48 VQKVSRSLAARPGGRPGAAEAAEEPDVVVRRQEALA--AARLRMQEELNAQAEKYKEKQR 105 VQ + A+P +P A++ +RQEALA AR+R Q + A+K + QR Sbjct: 7538527 VQHNAAQQHAKPAAKPAKLTNAQKLQQEHQRQEALAKQQARIRQQNLVKQAAQKKQTSQR 7538706 Query: 106 QLEEERRR 113 + + R Sbjct: 7538707 AASKNQAR 7538730 Score = 30.0 bits (66), Expect = 1.1 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +3 Query: 78 RQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQE 137 +QEAL R + E+ + AEK + K E + ++ + ++ ++ K Y+ +L E Sbjct: 6011571 KQEALKLERRKKNEQKRSDAEKARRK----EYDEKKAEFLLANPTKKDKDYQEYEELPAE 6011738 Query: 138 VESAASSASAVPKSKPNKKPL 158 V+S S PK P+ Sbjct: 6011739 VDSDDLSDLDEPKELLRDNPV 6011801 Score = 29.6 bits (65), Expect = 1.4 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = +3 Query: 90 QEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASSASAVP 149 Q+E Q + +E+Q+QLE+++ +Q+ E Q+G+ Q+ E S+ S + Sbjct: 1155399 QQEQPQQEQSQQEQQQQLEQQQEQQQEHQQEHQQQGQQ-------EQQQEQQPSTTSPIS 1155557 Query: 150 KS 151 S Sbjct: 1155558 SS 1155563 Score = 29.3 bits (64), Expect = 1.8 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = +3 Query: 92 ELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVES 140 E+ + +K KEK+++ E+E+ ++K E +E + K + EVE+ Sbjct: 564921 EMEREKKKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKKRKENEVEN 565067 Score = 28.9 bits (63), Expect = 2.4 Identities = 17/68 (25%), Positives = 34/68 (50%) Frame = +2 Query: 70 EEPDVVVRRQEALAAARLRMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYK 129 E+P + +E ++E + EK KEK+++ E+ER +++ E +E + K Sbjct: 1852049 EKPKQKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEREKEREREREREKEKEKEK 1852228 Query: 130 GNLKLNQE 137 K +Q+ Sbjct: 1852229 IKHKTHQD 1852252 Score = 28.9 bits (63), Expect = 2.4 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%) Frame = -2 Query: 90 QEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASS----A 145 +EE + E+ +E++ + EEE ++ E +EG Y + LN +++ S+ Sbjct: 2842879 EEEEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGNLYIKDTILNIMLQTDKSTYEELY 2842700 Query: 146 SAVPKSKPNKKPLRGGGYNPL 166 S +P N PL +NP+ Sbjct: 2842699 SFIPNKYKNNLPLH---WNPI 2842646 Score = 28.5 bits (62), Expect = 3.1 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = -2 Query: 125 GKSYKGNLKLNQ-EVESAASSASAVPKSKPNKKPLRGGGYNPLSGEGGGTCSWRPGRRGP 183 G+ G L +N+ ++++ SS S K GG + G GGG R G RG Sbjct: 8135305 GRFSNGTLHINKHDIKTVYSSKS---------KGYNRGGSSSRGGGGGGRGGSRGGGRGG 8135153 Query: 184 SAGGXG 189 +GG G Sbjct: 8135152 RSGGRG 8135135 Score = 27.7 bits (60), Expect = 5.3 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = -3 Query: 88 RMQEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEV 138 ++ +ELN K KE ++++ER++ WE + E + K K +Q++ Sbjct: 4359693 QLLKELNDLKSKNKEIDDRIQQERQQWHSNRWEIVAELEQEKSKYKKSQDL 4359541 Score = 27.7 bits (60), Expect = 5.3 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Frame = +2 Query: 44 VYLLVQKVSRSLAARPGGRPGAAEAAEEPDVVVRRQEALAAARLRMQEELNAQAEKYKEK 103 V L++++ R + + EE +++V++Q QE + Q + EK Sbjct: 6302420 VKLMIEEEERRRKLEEKRQEDLRKIQEEQELLVKQQ----------QEFIAKQQQLELEK 6302569 Query: 104 QRQL----EEERRRQKIVMWESMQEGKSYK 129 QRQL EE+RR +++++ M + + K Sbjct: 6302570 QRQLQDQLEEDRRLEELMLQMEMDQEERIK 6302659 Score = 27.3 bits (59), Expect = 7.0 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = +3 Query: 90 QEELNAQAEKYKEKQRQLEEERRRQKIVMWESMQEGKSYKGNLKLNQEVESAASS----A 145 +EE E+ +E++ + EEE ++ E +EG Y + LN +++ S+ Sbjct: 3188907 EEEEKEGEEEEEEEEEEEEEEEEEEEEEEEEEEEEGNLYIKDTILNIMLQTDKSTYEELY 3189086 Query: 146 SAVPKSKPNKKPLRGGGYNPL 166 S +P N PL +NP+ Sbjct: 3189087 SFIPNKYKNNLPLH---WNPI 3189140 Database: D.discoideum_AX4/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 33,943,072 Number of sequences in database: 6 Lambda K H 0.310 0.130 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,779,562 Number of Sequences: 6 Number of extensions: 33058 Number of successful extensions: 454 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 87 Number of HSP's gapped (non-prelim): 418 length of query: 189 length of database: 11,314,357 effective HSP length: 95 effective length of query: 94 effective length of database: 11,313,787 effective search space: 1063495978 effective search space used: 1063495978 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 58 (26.9 bits)