TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|350646170|emb|CCD59154.1| Selenoprotein S [Schistosoma mansoni] (125 letters) Database: A.laibachii_Nc14/genome.fa 3816 sequences; 32,740,139 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|325182092|emb|FR824068.1| Albugo laibachii Nc14, genomic cont... 29 0.88 gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic cont... 28 1.5 gi|325183031|emb|FR824081.1| Albugo laibachii Nc14, genomic cont... 27 2.6 gi|325185339|emb|FR824125.1| Albugo laibachii Nc14, genomic cont... 27 3.4 gi|325181271|emb|FR824059.1| Albugo laibachii Nc14, genomic cont... 27 4.4 gi|325186653|emb|FR824160.1| Albugo laibachii Nc14, genomic cont... 27 4.4 gi|325191483|emb|FR824407.1| Albugo laibachii Nc14, genomic cont... 27 4.4 gi|325187678|emb|FR824193.1| Albugo laibachii Nc14, genomic cont... 26 5.7 gi|325192036|emb|FR824424.1| Albugo laibachii Nc14, genomic cont... 26 5.7 gi|325193016|emb|FR824556.1| Albugo laibachii Nc14, genomic cont... 26 5.7 gi|325184401|emb|FR824104.1| Albugo laibachii Nc14, genomic cont... 26 7.5 gi|325185701|emb|FR824133.1| Albugo laibachii Nc14, genomic cont... 26 7.5 gi|325186932|emb|FR824169.1| Albugo laibachii Nc14, genomic cont... 26 7.5 gi|325190153|emb|FR824295.1| Albugo laibachii Nc14, genomic cont... 26 7.5 gi|325179460|emb|FR824046.1| Albugo laibachii Nc14, genomic cont... 25 9.8 gi|325189459|emb|FR824260.1| Albugo laibachii Nc14, genomic cont... 25 9.8 gi|325190372|emb|FR824307.1| Albugo laibachii Nc14, genomic cont... 25 9.8 gi|325194784|emb|FR825586.1| Albugo laibachii Nc14, genomic cont... 25 9.8 >gi|325182092|emb|FR824068.1| Albugo laibachii Nc14, genomic contig CONTIG_23_NC14_v4_178735_235 Length = 178735 Score = 28.9 bits (63), Expect = 0.88 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Frame = -2 Query: 47 ESHRLAMEAARAKFQAEFNAEVTQHKSRNQDEGEGKSNVRK----STDSDEKKK 96 E + + E R+K + E T+ KS ++D KSN+RK S D E ++ Sbjct: 141696 ERNMRSKELERSKVRENRKRESTRSKSEDRDRSRTKSNIRKMARRSRDRGESRR 141535 >gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic contig CONTIG_3_NC14_v4_366484_228 Length = 366484 Score = 28.1 bits (61), Expect = 1.5 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = +1 Query: 26 LSYFLWKFFRSWCENSSTVNNESHRLAMEAARAKFQAEFNAEV---TQHKSRNQDEGEGK 82 +S L++ + C+N+S + S RLA+ ++ + +A ++V T H D GK Sbjct: 153976 VSVLLYRGYSKTCDNTSCIPFRSERLALASSESCTKASSPSDVLTSTHHTDNRIDL*SGK 154155 Query: 83 SNVRKSTD 90 + K+ D Sbjct: 154156 FSNLKTYD 154179 Score = 25.4 bits (54), Expect = 9.8 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +2 Query: 47 ESHRLAMEAARAKFQAEFNAEVTQHKSRNQDEGEGKSNVRKSTDSD 92 ++ R ++AAR K Q + + + Q G+GK R SD Sbjct: 211631 QAKRSTLQAARQKEQESIAELSNRKRQKRQSIGKGKDQTRSMFGSD 211768 >gi|325183031|emb|FR824081.1| Albugo laibachii Nc14, genomic contig CONTIG_36_NC14_v4_137019_239 Length = 137019 Score = 27.3 bits (59), Expect = 2.6 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Frame = +2 Query: 47 ESHRLAMEAARAKFQAEFNAEVTQ--HKSRNQDEGEGKSNVRKSTDSDEKKKRFRTSDYN 104 + HR A + + E E++ HK + + K VR+ + EKKK ++ N Sbjct: 39461 KKHRTASKPTMLIPEEESTIELSSKSHKKMKKKRKKSKKTVRRQESTREKKKNTKSCS*N 39640 Query: 105 P-------LMGDTGKTYRPTSRFCS 122 + + + YR SR C+ Sbjct: 39641 SVRMIP**INSNVQRKYRAKSRCCT 39715 >gi|325185339|emb|FR824125.1| Albugo laibachii Nc14, genomic contig CONTIG_80_NC14_v4_91891_236 Length = 91891 Score = 26.9 bits (58), Expect = 3.4 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -2 Query: 86 RKSTDSDEKKKRFRTSDYNPLMGDTGKTYRPTSRFC 121 R S + +RF + Y+PL G G+ P S FC Sbjct: 21756 RSHLASGARARRFAGTPYHPLGGMYGRGSYPESHFC 21649 >gi|325181271|emb|FR824059.1| Albugo laibachii Nc14, genomic contig CONTIG_14_NC14_v4_213144_226 Length = 213144 Score = 26.6 bits (57), Expect = 4.4 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +2 Query: 86 RKSTDSDEKKKRFRTSDYNPLMGDTGKTYRPTSRFC 121 R S + +RF + Y+PL G G+ P S FC Sbjct: 104420 RSHLASGARARRFSGTPYHPLGGMYGRGPYPESHFC 104527 Score = 25.8 bits (55), Expect = 7.5 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +2 Query: 86 RKSTDSDEKKKRFRTSDYNPLMGDTGKTYRPTSRFC 121 R S + +RF + Y+PL G G P S FC Sbjct: 126632 RSHLASGARARRFAGTSYHPLGGMYGHGPYPESHFC 126739 >gi|325186653|emb|FR824160.1| Albugo laibachii Nc14, genomic contig CONTIG_115_NC14_v4_74376_238 Length = 74376 Score = 26.6 bits (57), Expect = 4.4 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -3 Query: 30 LWKFFRSWCENSSTVNNES 48 LW F+ C+ SS VNNE+ Sbjct: 68179 LWAFYLFTCQRSSKVNNET 68123 >gi|325191483|emb|FR824407.1| Albugo laibachii Nc14, genomic contig CONTIG_362_NC14_v4_24116_230 Length = 24116 Score = 26.6 bits (57), Expect = 4.4 Identities = 8/15 (53%), Positives = 13/15 (86%) Frame = +3 Query: 24 IALSYFLWKFFRSWC 38 I LSYF++++ +SWC Sbjct: 19536 IILSYFVFRYIKSWC 19580 >gi|325187678|emb|FR824193.1| Albugo laibachii Nc14, genomic contig CONTIG_148_NC14_v4_61199_195 Length = 61199 Score = 26.2 bits (56), Expect = 5.7 Identities = 18/88 (20%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Frame = +3 Query: 18 LVTLFIIALSYFLWKFFRSWCENSSTVNNESHRLAMEAARAKFQAEFNAE----VTQHKS 73 ++ LF+ ++F F+ C N++ + ++ H + +E + + F+A + S Sbjct: 23919 VIVLFVDVCNHF----FKGMCPNNAFILSQFHCIKIEGHKCRKTGNFHATTLYVIHAANS 24086 Query: 74 RNQDEGEGKSNVRKSTDSDEKKKRFRTS 101 N D +G+ R + +K RT+ Sbjct: 24087 ANVDGVDGRIIRRNAFKCLDKTSAMRTA 24170 >gi|325192036|emb|FR824424.1| Albugo laibachii Nc14, genomic contig CONTIG_380_NC14_v4_22738_173 Length = 22738 Score = 26.2 bits (56), Expect = 5.7 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%) Frame = +3 Query: 18 LVTLFIIALSYFLWKFFRSWCENSSTVNNESHRLAMEA-ARAKFQAEFNAEVTQHKSRNQ 76 LVTLF++ S + S ++ R+ EA ++ + E+N ++ SRNQ Sbjct: 8511 LVTLFLVDDSNGTKEHAGEPSNRRSVLDRLGDRIDSEAHVSSRKRKEWN----EYPSRNQ 8678 Query: 77 DEGEGKSNVRKSTDSDEKKKRFRTSDYN 104 E R S ++E KRFR ++ N Sbjct: 8679 SERSPVDWKRNSFRANEFVKRFRKNERN 8762 >gi|325193016|emb|FR824556.1| Albugo laibachii Nc14, genomic contig CONTIG_524_NC14_v4_12630_112 Length = 12630 Score = 26.2 bits (56), Expect = 5.7 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%) Frame = -2 Query: 18 LVTLFIIALSYFLWKFFRSWCENSSTVNNESHRLAMEA-ARAKFQAEFNAEVTQHKSRNQ 76 LVTLF++ S + S ++ R+ EA ++ + E+N ++ SRNQ Sbjct: 2741 LVTLFLVDDSNGTKEHAGEPSNRRSVLDRLGDRIDSEAHVSSRKRKEWN----EYPSRNQ 2574 Query: 77 DEGEGKSNVRKSTDSDEKKKRFRTSDYN 104 E R S ++E KRFR ++ N Sbjct: 2573 SERSPVDWKRNSFRANEFVKRFRKNERN 2490 >gi|325184401|emb|FR824104.1| Albugo laibachii Nc14, genomic contig CONTIG_59_NC14_v4_105594_236 Length = 105594 Score = 25.8 bits (55), Expect = 7.5 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = -3 Query: 64 FNAEVTQHKSRNQDEGEGKSNVRKSTDSDEKKKRFRTSDYNPLMGDTGKTYRPTSRFCST 123 +N V+ S + D+ KS++ S+ S K + DY +G RP++R C T Sbjct: 65248 YNRSVSSLLSFSHDDKTSKSSL--SSRSIRKGHSAQFHDYTKGLG------RPSTRCCRT 65093 Query: 124 GG 125 GG Sbjct: 65092 GG 65087 >gi|325185701|emb|FR824133.1| Albugo laibachii Nc14, genomic contig CONTIG_88_NC14_v4_83639_256 Length = 83639 Score = 25.8 bits (55), Expect = 7.5 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 7/71 (9%) Frame = +3 Query: 18 LVTLFIIALSYFLWKFF--RSWCENS-----STVNNESHRLAMEAARAKFQAEFNAEVTQ 70 LVT ++ LS+FLW F RS NS N L + K A +V Q Sbjct: 62553 LVTFLLLPLSHFLWSLFSRRSLSLNSFFSPFRVFNLTKRSLLSKFRLTKHPANSAFKVQQ 62732 Query: 71 HKSRNQDEGEG 81 N+ E G Sbjct: 62733 KSEENRYEKAG 62765 >gi|325186932|emb|FR824169.1| Albugo laibachii Nc14, genomic contig CONTIG_124_NC14_v4_71037_225 Length = 71037 Score = 25.8 bits (55), Expect = 7.5 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Frame = -3 Query: 37 WCENSSTVNNESHRLAMEAARAKFQAEFNAEVTQHKSRNQ---DEGEG---KSNVRKSTD 90 + ENS+ ++ H+ ++ + AEF + K+ N+ +G G KS+ RK + Sbjct: 27958 YSENSNEYDDNVHKTFLQPTKGLAGAEFGSRAAMEKALNEFAATQGYGIVTKSSYRKRNE 27779 Query: 91 -SDEKKKRFRTSDYNPLMGDTGKT 113 S K R Y +G T +T Sbjct: 27778 QS*VFYKCDRGGSYRNRLGSTEET 27707 >gi|325190153|emb|FR824295.1| Albugo laibachii Nc14, genomic contig CONTIG_250_NC14_v4_38020_229 Length = 38020 Score = 25.8 bits (55), Expect = 7.5 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +3 Query: 85 VRKSTDSDEKKKRFRTSDYNPLMGDTGKTYRPTSR 119 V KST +D+ FRT + M T +RP +R Sbjct: 11280 VLKSTSTDDLPTAFRTLPMHCAMSGTSTRWRPRNR 11384 >gi|325179460|emb|FR824046.1| Albugo laibachii Nc14, genomic contig CONTIG_1_NC14_v4_580768_240 Length = 580768 Score = 25.4 bits (54), Expect = 9.8 Identities = 8/14 (57%), Positives = 12/14 (85%) Frame = -2 Query: 36 SWCENSSTVNNESH 49 SWC ++ST+ +ESH Sbjct: 336906 SWCSSASTLESESH 336865 >gi|325189459|emb|FR824260.1| Albugo laibachii Nc14, genomic contig CONTIG_215_NC14_v4_44622_273 Length = 44622 Score = 25.4 bits (54), Expect = 9.8 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 62 AEFNAEVTQHKSRNQDEGEGKSNVRKSTDSDEKKK 96 A +AE+TQ ++ + + E S R DEK K Sbjct: 22162 ANKSAEITQQENTHSKQTETHSEKRNGLSEDEKSK 22266 >gi|325190372|emb|FR824307.1| Albugo laibachii Nc14, genomic contig CONTIG_262_NC14_v4_36391_249 Length = 36391 Score = 25.4 bits (54), Expect = 9.8 Identities = 12/42 (28%), Positives = 24/42 (57%) Frame = +2 Query: 18 LVTLFIIALSYFLWKFFRSWCENSSTVNNESHRLAMEAARAK 59 + +LF + L +FL +S+ +N +++ H + +A RAK Sbjct: 14300 MTSLFHLKLVFFLCIQLQSFAQNREHIHSSRHLSSNKAPRAK 14425 >gi|325194784|emb|FR825586.1| Albugo laibachii Nc14, genomic contig CONTIG_2514_NC14_v4_747_282 Length = 747 Score = 25.4 bits (54), Expect = 9.8 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -1 Query: 39 ENSSTVNNESHRLAMEAARAKFQAEFNAEVTQHKSRNQDEGEGKSNVRKSTDSDE 93 E+ S ++SH E RAKFQA+ + + H S ++ S + + SDE Sbjct: 573 ESDSHSESDSHE---EQQRAKFQAKVSVCFSHHSSGTNEDALDPS-IHMTNTSDE 421 Database: A.laibachii_Nc14/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,740,139 Number of sequences in database: 3816 Lambda K H 0.315 0.129 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,496,657 Number of Sequences: 3816 Number of extensions: 51702 Number of successful extensions: 431 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 387 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 431 length of query: 125 length of database: 10,913,379 effective HSP length: 88 effective length of query: 37 effective length of database: 10,577,571 effective search space: 391370127 effective search space used: 391370127 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 54 (25.4 bits)