TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|317008618|ref|NP_001186934.1| selenoprotein S [Pongo abelii] (190 letters) Database: P.capsici/genome.fa 917 sequences; 64,023,748 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PHYCAscaffold_3 38 0.009 PHYCAscaffold_2 36 0.027 PHYCAscaffold_84 35 0.079 PHYCAscaffold_13 35 0.079 PHYCAscaffold_20 33 0.18 PHYCAscaffold_29 33 0.23 PHYCAscaffold_64 32 0.39 PHYCAscaffold_68 32 0.52 PHYCAscaffold_34 32 0.52 PHYCAscaffold_79 32 0.67 PHYCAscaffold_48 32 0.67 PHYCAscaffold_55 31 0.88 PHYCAscaffold_15 31 1.1 PHYCAscaffold_6 31 1.1 PHYCAscaffold_10 30 2.0 PHYCAscaffold_5 30 2.0 PHYCAscaffold_61 30 2.6 PHYCAscaffold_24 30 2.6 PHYCAscaffold_19 30 2.6 PHYCAscaffold_46 29 3.3 PHYCAscaffold_40 29 3.3 PHYCAscaffold_4 29 3.3 PHYCAscaffold_273 29 4.4 PHYCAscaffold_140 29 4.4 PHYCAscaffold_449 28 5.7 PHYCAscaffold_83 28 5.7 PHYCAscaffold_28 28 5.7 PHYCAscaffold_21 28 5.7 PHYCAscaffold_18 28 5.7 PHYCAscaffold_1 28 5.7 PHYCAscaffold_31 28 7.4 PHYCAscaffold_25 28 7.4 PHYCAscaffold_106 28 9.7 PHYCAscaffold_100 28 9.7 PHYCAscaffold_87 28 9.7 PHYCAscaffold_43 28 9.7 PHYCAscaffold_39 28 9.7 PHYCAscaffold_35 28 9.7 PHYCAscaffold_30 28 9.7 PHYCAscaffold_9 28 9.7 PHYCAscaffold_8 28 9.7 PHYCAscaffold_7 28 9.7 >PHYCAscaffold_3 Length = 1611504 Score = 37.7 bits (86), Expect = 0.009 Identities = 20/63 (31%), Positives = 39/63 (61%) Frame = +3 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQ 136 K Q A RLK+QEE+ A+ E+ +E+ K+ +E ++R+++E + + + + K+ Q Sbjct: 196290 KEQAAEERKRLKIQEEMEAK-EREEERKKEAQEREQRRELERAEQLAIEQQREQERKQRQ 196466 Query: 137 EED 139 EE+ Sbjct: 196467 EEE 196475 Score = 28.1 bits (61), Expect = 7.4 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = +1 Query: 88 KMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSS 147 K ++E + EK KEK K+ +EEK++ K + D ++ K G+ K +++ G Sbjct: 137689 KKEKEKKEKKEK-KEKEKKEKEEKKKAKKD--DGDKKDKKDDGDKKDKKDKKDDGDKKEK 137859 Query: 148 VVLKRKSDRKPLRGGG 163 K D+K + G Sbjct: 137860 KDKKDDGDKKQKQDDG 137907 Score = 27.7 bits (60), Expect = 9.7 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = -3 Query: 134 KPQEEDSPGPSTSSVVLKRKSDRKPLRGGGYNPLSGEGGGACSWRPGRRGPSSGG 188 KP SP STS+ GGG S GGGA + G P+SGG Sbjct: 1475077 KPAASSSPFGSTSTF------------GGGAGTTSAFGGGATTGGFGTPTPASGG 1474949 >PHYCAscaffold_2 Length = 1925921 Score = 36.2 bits (82), Expect = 0.027 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 3/99 (3%) Frame = +2 Query: 50 KLFARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEE 109 +L A R +RQ++ + + D+ + QE+LAA R + QE + KE+L++ EE Sbjct: 440492 QLLATARHIRQQRTEAQILREQQDL--EYQESLAADRRREQEAREQAEREEKERLRKEEE 440665 Query: 110 EK---RRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPST 145 E+ K E + ++ + YK + + + + GP + Sbjct: 440666 ERCAEEEAKREEEEKARQEELYKAEIEVKRAKIADGPKS 440782 >PHYCAscaffold_84 Length = 182275 Score = 34.7 bits (78), Expect = 0.079 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 8/74 (10%) Frame = +2 Query: 73 DVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKR--------RQKIEMWDSMQE 124 D V KR E A R + +EEL + E+ ++K K+ +EEKR +Q++E ++E Sbjct: 89054 DKVYKRMEQRAVERKQRREELKRKYEELEQKKKKEQEEKREAREALLLQQRLEEKARVRE 89233 Query: 125 GKSYKGNAKKPQEE 138 K+ + A + ++E Sbjct: 89234 RKAAEALALQEKQE 89275 >PHYCAscaffold_13 Length = 1060349 Score = 34.7 bits (78), Expect = 0.079 Identities = 28/104 (26%), Positives = 51/104 (49%) Frame = +2 Query: 56 RALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQK 115 R L+Q+Q A+E + KRQ+ L A R Q E+ + +L + EEE+RRQ+ Sbjct: 643061 RKLQQQQ--EMQLALERQIEEKRQQKLEAKR--------RQEEEDRRELLRFEEEQRRQR 643210 Query: 116 IEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVVLKRKSDRKPL 159 E + +QE K K ++ + + + ++ L + ++ L Sbjct: 643211 AEE-ERLQEEKRRKAEMEQQKAQQAAAAVAAANELAKAQQQQKL 643339 Score = 27.7 bits (60), Expect = 9.7 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -1 Query: 74 VVVKRQEALAA---ARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKS 127 VV K E+LAA A + +ELN QVE +++ +QL R S++ +S Sbjct: 27857 VVTKMNESLAARQEALRRQNQELNQQVEAIEQRRQQLTSGSRPSSSSSTTSLRGTRS 27687 >PHYCAscaffold_20 Length = 899172 Score = 33.5 bits (75), Expect = 0.18 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Frame = +3 Query: 56 RALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQ-----VEKHKEKLKQLEEE 110 R +RQR++ AAA E ++ KR E A K + A+ E+ KEK +Q E Sbjct: 360300 RKMRQRRMQLAAAKHEKELAKKRDEDKEAQERKARRRAEAERTRVLAEEEKEKARQRALE 360479 Query: 111 KRRQKIEMWDSMQEGKSYKGNAKKPQEE 138 ++ +E + + + QEE Sbjct: 360480 AAQRDLERQQNADAWRIQTEELLRQQEE 360563 Score = 31.2 bits (69), Expect = 0.88 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -2 Query: 147 SVVLKRKSDRKPLRG--GGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 SV +KR ++ G GGY G GGG WR G RG G G Sbjct: 172379 SVEIKRAEPKEARAGLGGGYGGRGGRGGG---WRGGGRGAGGGYNG 172251 Score = 28.9 bits (63), Expect = 4.4 Identities = 26/82 (31%), Positives = 38/82 (46%) Frame = +2 Query: 58 LRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIE 117 L+ RQ ++ A A E AAA K E+L A E + K+ EKRR+K+E Sbjct: 105092 LKARQAEKNAKAQEAAAKA------AAAAAKEDEKLAAMPEAQRNKIL----EKRRKKLE 105241 Query: 118 MWDSMQEGKSYKGNAKKPQEED 139 + K NAKK +++ Sbjct: 105242 K-------QKEKENAKKSSKDE 105286 Score = 28.9 bits (63), Expect = 4.4 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 20/106 (18%) Frame = -2 Query: 54 RLRALRQRQLDRAAAAVEPDVVVKRQE----------ALAAARLKMQEELNAQVEKHKE- 102 R +ALR ++ D +V+RQE A+ A + K E+L + E+ E Sbjct: 372311 RAKALRAQRSMEEIKRFNEDTLVRRQEVQRKIKEEEDAVLAYQAKKAEDLKRREEEEAER 372132 Query: 103 ---------KLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEED 139 KL+ ++E+ +K E+ D ++ ++ + ++ +E D Sbjct: 372131 RHEAELRCAKLRSMQEKMANEKAEL-DELRAKRAAEARERQAREAD 371997 >PHYCAscaffold_29 Length = 707326 Score = 33.1 bits (74), Expect = 0.23 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = -3 Query: 76 VKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMW 119 ++ ++ + R + + + ++ KEK +QLEEE +RQ+ E W Sbjct: 219284 IEHEDKRSGKRYAVDAIMEEEEQRRKEKSRQLEEESKRQRKENW 219153 >PHYCAscaffold_64 Length = 301055 Score = 32.3 bits (72), Expect = 0.39 Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 1/136 (0%) Frame = +3 Query: 13 ALETEGLRFLHITVGSLLATYGWYIVFSCILLYVVFQKLFARLRALRQRQLDRAAAAVEP 72 AL+TE L GS G + C L FQK F + + Q++L E Sbjct: 162930 ALKTEQHALLESPTGS-----GKTLALLCSTL--TFQKQFVKEKVAAQKKL-------EQ 163067 Query: 73 DVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKG-N 131 D K Q+A + L AQ++ + + + L+ +K RQ E QE ++ +G Sbjct: 163068 DPTFKEQQAKKQTQEAQLRALEAQMQLMEAQQQILQAKKARQGQEDQQLTQETQATQGTQ 163247 Query: 132 AKKPQEEDSPGPSTSS 147 A + +D P+ S Sbjct: 163248 ATEMATQDDVAPTQPS 163295 >PHYCAscaffold_68 Length = 334182 Score = 32.0 bits (71), Expect = 0.52 Identities = 26/109 (23%), Positives = 54/109 (49%) Frame = -2 Query: 49 QKLFARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 +++ R + L+Q++LDR KR EAL ++ ++ + +EK K+ Sbjct: 93686 EQIREREQKLKQQELDR-----------KRLEALREKDMERHQQRLKSKREQEEKQKRDV 93540 Query: 109 EEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVVLKRKSDRK 157 EEK+++ ++ + +E + + A K +E S V++R++ RK Sbjct: 93539 EEKQKKLVK--KAREEEATQRATAAKKKELVRVMEQWKSFVIRRENRRK 93399 >PHYCAscaffold_34 Length = 622686 Score = 32.0 bits (71), Expect = 0.52 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = +1 Query: 49 QKLFARLRALRQRQLDRAAA--AVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQ 106 Q+ A+ RA +QRQ + AAA A E + +EA A + Q+E A+ + E Sbjct: 58252 QQRIAQRRARKQRQEEEAAATSAKEQQSIADAEEAARLAAERDQQEALAEAQAQAEAEA- 58428 Query: 107 LEEEKRRQKI 116 EEK RQ+I Sbjct: 58429 --EEKERQEI 58452 Score = 30.0 bits (66), Expect = 2.0 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = +1 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQ 136 KRQ LA Q+E+N E+H+ +L+ L +++ + +Q+ + + K+ Q Sbjct: 58132 KRQHQLA------QKEMNRLQEEHERELRALTTSLAQEQARQEEKLQQRIAQRRARKQRQ 58293 Query: 137 EEDSPGPS 144 EE++ S Sbjct: 58294 EEEAAATS 58317 Score = 30.0 bits (66), Expect = 2.0 Identities = 19/86 (22%), Positives = 43/86 (50%) Frame = +2 Query: 49 QKLFARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 Q+L R ++Q +E + +++++ L EEL + EK + ++K+ E Sbjct: 392723 QRLLQEKRLQEEKQQQEEQRRIEEEKRLQKEQRLL-------EELQRENEKQQREVKRRE 392881 Query: 109 EEKRRQKIEMWDSMQEGKSYKGNAKK 134 EE R ++ + + +++ K ++ KK Sbjct: 392882 EELREEE-RLREELRKQKQFQEEKKK 392956 Score = 28.1 bits (61), Expect = 7.4 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 13/86 (15%) Frame = +2 Query: 76 VKRQEALAAARLKMQEELNAQVEKHKEKLKQ-------------LEEEKRRQKIEMWDSM 122 VKR+E +++EEL Q + +EK K+ ++E+ R++ E M Sbjct: 392867 VKRREEELREEERLREELRKQKQFQEEKKKKRMFEEKIRQEEIMRQQEEARRQAEAQALM 393046 Query: 123 QEGKSYKGNAKKPQEEDSPGPSTSSV 148 EG + A++ PG +TSS+ Sbjct: 393047 HEGNRFVSQAQQVL-HTQPGFATSSL 393121 >PHYCAscaffold_79 Length = 222129 Score = 31.6 bits (70), Expect = 0.67 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 3/92 (3%) Frame = -3 Query: 53 ARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKL---KQLEE 109 AR QR + A A E + K++ +LK ++ Q E KL KQ EE Sbjct: 84475 ARAHREEQRAREEAKAREEQEKRDKKERREMKEKLKREKAKQRQAEAELRKLVELKQAEE 84296 Query: 110 EKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSP 141 E+R ++ ++ K K +KK ++ SP Sbjct: 84295 ERRERE----HKEKKEKKEKKKSKKKEKYTSP 84212 Score = 28.5 bits (62), Expect = 5.7 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = -2 Query: 56 RALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQK 115 ++ R R+ + D RQE ARL QE ++ +VE H + QL + R Q Sbjct: 181790 KSKRNREKKKTKRHDGRDTKTSRQEGSPCARLGAQEGMHLEVEIH-S*IYQLPHKPRDQH 181614 Query: 116 IEMWD 120 +++ D Sbjct: 181613 LQLHD 181599 Score = 28.1 bits (61), Expect = 7.4 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -3 Query: 73 DVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWD 120 D RQE ARL QE ++ +VE H + QL + R Q +++ D Sbjct: 188461 DTKTSRQEGSPCARLGAQEGMHLEVEIH-S*IYQLPHKPRDQHLQLHD 188321 >PHYCAscaffold_48 Length = 534789 Score = 31.6 bits (70), Expect = 0.67 Identities = 15/54 (27%), Positives = 31/54 (57%) Frame = +1 Query: 87 LKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDS 140 L+ EE A ++H ++L++ +E+ R + EM E + + K+P++ED+ Sbjct: 374011 LQAAEEAYAAGQEHSKRLREQAKEQERLRQEMEQRRAEKQQEQEKEKEPKDEDA 374172 >PHYCAscaffold_55 Length = 463907 Score = 31.2 bits (69), Expect = 0.88 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%) Frame = +3 Query: 101 KEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQ---EEDS 140 KE+ KQ E+K+ +K+E + +E K K AKK + EEDS Sbjct: 90636 KERKKQKNEKKKLKKVERKEKKREKKRAKKEAKKEKRRYEEDS 90764 >PHYCAscaffold_15 Length = 1032281 Score = 30.8 bits (68), Expect = 1.1 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = -3 Query: 71 EPDVVVKRQEALAAARLKMQEELNA------QVEKHKEKLKQLEEEKRRQKIEMWDSMQE 124 E + + KR E + ++ +E+L Q+E+ K+ LK LEE + + K+EM Sbjct: 367794 EDEELEKRTERIEEHVVETEEKLTTLETQVTQIERTKKALKYLEENETK-KVEMETETVV 367618 Query: 125 GKSYKGNAKKPQEE 138 S K N KK + E Sbjct: 367617 KSSKKKNKKKKKTE 367576 Score = 30.4 bits (67), Expect = 1.5 Identities = 11/48 (22%), Positives = 27/48 (56%) Frame = +1 Query: 75 VVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSM 122 + + +EA R + + ++ +E+ + KLK+ +E K +++ + W M Sbjct: 578614 ITEEKEAAYQKRREEEAKIEQALEEQERKLKEEKERKEKEEFDQWKDM 578757 Score = 28.9 bits (63), Expect = 4.4 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%) Frame = +2 Query: 49 QKLFARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 QK A L L R + A E + R+E R++ +EE E+ +++ ++E Sbjct: 897173 QKKKAMLERLSTR-VAHAKQRYEEEQERLREEEEEKERIRREEE----AERERQRQLEVE 897337 Query: 109 EEKRRQKIEMWDS--MQEGKSYKGNAKKPQEED 139 EE RRQ+ E + + E K + A++ +EE+ Sbjct: 897338 EELRRQEEEEAEEARIAEEKEREERAQREREEE 897436 >PHYCAscaffold_6 Length = 1423605 Score = 30.8 bits (68), Expect = 1.1 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = -2 Query: 46 VVFQKLFARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEE------LNAQVEK 99 V+ + A+L ++ A AA +V V E + ARL+ +EE L Q+E Sbjct: 926033 VIGDLVTAQLAMAELMKMQHAFAARPSEVRVMELEKMNEARLREEEEKTKQRGLELQIEI 925854 Query: 100 HKEKLKQLEEEKRRQK 115 + K +QLE E R++ Sbjct: 925853 QRTKRRQLEMEFEREE 925806 >PHYCAscaffold_10 Length = 1190366 Score = 30.0 bits (66), Expect = 2.0 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%) Frame = -2 Query: 96 QVEKHKEKLKQLEEEKRRQKIEMWDSM--QEGKSY 128 Q K +E+LK+LEEEKRR++ E Q GKS+ Sbjct: 477997 QFTKEQERLKRLEEEKRRKEEENHTKAKNQTGKSW 477893 >PHYCAscaffold_5 Length = 1593284 Score = 30.0 bits (66), Expect = 2.0 Identities = 22/99 (22%), Positives = 38/99 (38%) Frame = +3 Query: 59 RQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEM 118 R RQL+ + V + E + + + NA + K+ E+ ++ Sbjct: 62913 RVRQLENGFSGVPNSNGETKNETKKYVKTETSKSYNADADMTVSSKKRKAEDDAEEEEPK 63092 Query: 119 WDSMQEGKSYKGNAKKPQEEDSPGPSTSSVVLKRKSDRK 157 ++ K K + KK EED+ V K K D+K Sbjct: 63093 VKKEKKEKKAKKHKKKAAEEDAEEEEEEPKVKKEKKDKK 63209 Score = 30.0 bits (66), Expect = 2.0 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = -2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKP 135 +R+E R++M+ + KEKL QL+EEKR + + +Q K Y +K P Sbjct: 775438 QREEEELRRRVQMKRHDALHNARQKEKLLQLKEEKRIAR----EIIQAAKGYNSVSKAP 775274 Score = 29.3 bits (64), Expect = 3.3 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 8/67 (11%) Frame = +3 Query: 59 RQRQLDRAAAA--------VEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEE 110 R + RAAAA + + + K QEA A+L+ Q++ + +K + + K LEE+ Sbjct: 1121733 RLKNKTRAAAANGTTGTPSSQQEQLKKAQEAQRLAQLQEQQKKLQEQQKAEAQRKLLEEQ 1121912 Query: 111 KRRQKIE 117 K++ ++E Sbjct: 1121913 KKKLQLE 1121933 Score = 28.5 bits (62), Expect = 5.7 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Frame = +2 Query: 141 PGPSTSSVVLKRKSDRKPLRGGGYNPLSGEG----GGACSWRPGRRGPSSG 187 P S V L+R + P G + G G GGA SWR G SSG Sbjct: 182795 PPTSRRGVALRRAVEEPPRLGVRNSRERGAGLEGLGGAASWRVGAPSSSSG 182947 >PHYCAscaffold_61 Length = 347729 Score = 29.6 bits (65), Expect = 2.6 Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 2/37 (5%) Frame = +2 Query: 82 LAAARLK--MQEELNAQVEKHKEKLKQLEEEKRRQKI 116 +AAA+ K ++E A+ E K++ K+LEE KRR+++ Sbjct: 31292 IAAAKQKEDAEKEKQARREAKKQRAKELEETKRREEV 31402 >PHYCAscaffold_24 Length = 787421 Score = 29.6 bits (65), Expect = 2.6 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%) Frame = +2 Query: 80 EALAAARLKMQ--EELNAQVEKHKEKLKQLEEEKRRQK---IEMWDSMQEGKSYKGNAKK 134 +AL +AR Q EEL+A++EK E+L L ++K+ K ++ + + K K AKK Sbjct: 265490 DALVSARKTKQTPEELDAEIEKLNEELDNLMKKKKLDKCARLQKDIDVLKRKRAKFPAKK 265669 Query: 135 -PQEEDSPGP 143 P SP P Sbjct: 265670 VPTPPPSPKP 265699 >PHYCAscaffold_19 Length = 944885 Score = 29.6 bits (65), Expect = 2.6 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 3/140 (2%) Frame = +3 Query: 2 ERQEDSLSARPALETEGLRFLHITVGSLLATYGWYIVFSCILLYVVFQKLFARLRALRQR 61 E Q SL++R L L SLLA+ + + Q +R LR Sbjct: 804711 EAQSSSLASRTTALKSDLEALETRYASLLASAKTHEEIATRATREG-QLRAEEVRLLRNE 804887 Query: 62 QLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHK---EKLKQLEEEKRRQKIEM 118 A VE + +K Q L A +QE+L + EK EKL+QLEE KR+ ++ Sbjct: 804888 SDQLRACNVE--LKMKTQVELEA----LQEQLRVRKEKQYQLLEKLQQLEEAKRQSDDQL 805049 Query: 119 WDSMQEGKSYKGNAKKPQEE 138 + E K+ K +A+ + E Sbjct: 805050 --ASAEDKARKLHARNQELE 805103 >PHYCAscaffold_46 Length = 525601 Score = 29.3 bits (64), Expect = 3.3 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 5/125 (4%) Frame = +1 Query: 39 FSCILLY--VVFQKLFARLRALRQRQLDRAAAAVEPDVVVKRQEALAAAR--LKMQEELN 94 + CI+ + QK+ Q LD A A ++ +EA AAR + +E Sbjct: 243121 YCCIIAQSPALLQKVLVDEWDAEQEWLDEALATKRTKTFLQWKEAAKAARKERRKKEGQE 243300 Query: 95 AQVEKHKEKLKQLEEEKRRQKIEMWDSMQ-EGKSYKGNAKKPQEEDSPGPSTSSVVLKRK 153 Q E+ K K+ +E ++ K E D ++ E K N K+ + S P S +++ Sbjct: 243301 KQQERAARKAKREQETAQKVKEEEEDVVKVEESVVKDNVKEEDCKSSSVPQERSQQGQKR 243480 Query: 154 SDRKP 158 +P Sbjct: 243481 KIEQP 243495 >PHYCAscaffold_40 Length = 570383 Score = 29.3 bits (64), Expect = 3.3 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = -2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGK-SYKGNAKK 134 +R++A AAR ++ L A + ++K +EEE+RRQ+ + GK +Y GN K Sbjct: 367537 QRRKAEEAAREAEKQRLAALQQAEAMRIKAVEEERRRQE-------ENGKRNYDGNRLK 367382 >PHYCAscaffold_4 Length = 1587695 Score = 29.3 bits (64), Expect = 3.3 Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = -2 Query: 96 QVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQE-EDSPGPSTSSVVLKRKS 154 QVE+ +EKL L + + D + + G ++ + E S GP+ + ++ Sbjct: 391 QVERPEEKLHSLSDTTVTSSQDSDDGNEPTRRRSGRRRRRESAESSVGPNDDTTGIRYTD 212 Query: 155 DRKPLRGGGYNPLSGEGGGACSWRPGRRGPSS 186 ++ + GG +P S G +W G SS Sbjct: 211 EQTKRKQGGNSPFS-LVSGVLTWIKACAGGSS 119 >PHYCAscaffold_273 Length = 8874 Score = 28.9 bits (63), Expect = 4.4 Identities = 24/90 (26%), Positives = 42/90 (46%) Frame = -1 Query: 58 LRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIE 117 L +R ++ A A DV+ + L A R E+L AQ+ +++ +L+ E KIE Sbjct: 8355 LGRRDMEIADMARAEDVLRRDLGVLVAER----EDLAAQISSANDEVDRLQVEVGAAKIE 8188 Query: 118 MWDSMQEGKSYKGNAKKPQEEDSPGPSTSS 147 + + + +G+ Q PG S S+ Sbjct: 8187 IEELQYTLRLTEGSLAYAQRSVDPGHSGSA 8098 >PHYCAscaffold_140 Length = 50072 Score = 28.9 bits (63), Expect = 4.4 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = +3 Query: 24 ITVGSLLATYGWYIVFSCILLYVVFQKLFARLRALRQ 60 I +G L T WYIV++CI +++++++ +RA Q Sbjct: 1212 IPMGPLKKT--WYIVYTCI**IILYRRIYPHIRATLQ 1316 >PHYCAscaffold_449 Length = 3984 Score = 28.5 bits (62), Expect = 5.7 Identities = 26/96 (27%), Positives = 45/96 (46%) Frame = -1 Query: 60 QRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMW 119 +R ++ A A DV+ + L A R E+L AQ+ +++ +L+ E KIE+ Sbjct: 3507 RRDMEIADMARVEDVLRRDLGVLVAER----EDLAAQISTANDEVDRLQAEVGAAKIEIE 3340 Query: 120 DSMQEGKSYKGNAKKPQEEDSPGPSTSSVVLKRKSD 155 + + +G+ Q PG S SV + +SD Sbjct: 3339 ELQYTLRLTEGSLAYAQRSVDPGHS-GSVAAEPQSD 3235 >PHYCAscaffold_83 Length = 185922 Score = 28.5 bits (62), Expect = 5.7 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +3 Query: 80 EALAAARLKMQ--EELNAQVEKHKEKLKQLEEEKRRQK 115 +AL +AR Q EEL+A++EK E+L L ++K+ K Sbjct: 33708 DALVSARKTKQTPEELDAEIEKLNEELDNLMKKKKLDK 33821 >PHYCAscaffold_28 Length = 757753 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/58 (20%), Positives = 28/58 (48%) Frame = +1 Query: 101 KEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVVLKRKSDRKP 158 K + +L +++R+ + W+ +Q + ++ED+ T SV + + R+P Sbjct: 420100 KNHVAELSSDEQRRAADAWERLQTLYGLFRKLEASEDEDTEDSDTESVEAEEREQRQP 420273 >PHYCAscaffold_21 Length = 930814 Score = 28.5 bits (62), Expect = 5.7 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 77 KRQEALAAARLKMQ--EELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKK 134 K+QE + R K Q ++ N++ +HK+ + + +R+ K E W S + S+ K+ Sbjct: 412484 KKQEKHSNGRNKDQRGDKTNSK-SQHKDTKENSDRSERKSKSEKWCSFHKTSSHSTQTKQ 412308 Query: 135 PQEEDSP 141 + +P Sbjct: 412307 TSSKRTP 412287 >PHYCAscaffold_18 Length = 984210 Score = 28.5 bits (62), Expect = 5.7 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -2 Query: 76 VKRQEALAAARLKMQEELNAQVEKHKEKLKQLE 108 VKRQEA ++ E+L A +E K K+KQL+ Sbjct: 891896 VKRQEATSSGTPTNNEKLPADMEDLKVKIKQLQ 891798 >PHYCAscaffold_1 Length = 2170955 Score = 28.5 bits (62), Expect = 5.7 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +2 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQE 124 KRQE A L QEE N E+ + L++ E K R+ +++ ++E Sbjct: 1148300 KRQELQLARELAEQEESNLMREEKYQSLQEEAEAKARKLKKVYTKVKE 1148443 Score = 28.5 bits (62), Expect = 5.7 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -3 Query: 160 RGGGYNPLSGEGGGACSW--RPGRRGPSSGGXG 190 RGGG G GGG S+ R G RG GG G Sbjct: 232830 RGGGRGGFGGRGGGRGSFGGRGGGRGGGFGGRG 232732 Score = 28.5 bits (62), Expect = 5.7 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = -3 Query: 160 RGGGYNPLSGEGGGACSWRPGRRGPSSGGXG 190 RGGG G GGG GR G GG G Sbjct: 232800 RGGGRGSFGGRGGGRGGGFGGRGGGRGGGRG 232708 Score = 28.1 bits (61), Expect = 7.4 Identities = 8/24 (33%), Positives = 15/24 (62%) Frame = +3 Query: 18 GLRFLHITVGSLLATYGWYIVFSC 41 G+ F+H G+ + + WY +F+C Sbjct: 2065683 GIAFVH*NTGNKVLVHNWYTIFTC 2065754 >PHYCAscaffold_31 Length = 686815 Score = 28.1 bits (61), Expect = 7.4 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +3 Query: 77 KRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYK 129 K+ E R K+Q+ +VEK EK KQLE+ + K + D+ ++ YK Sbjct: 317268 KQLEENEEMRKKLQQS-QEEVEKAAEKRKQLEKHISQLKNDRGDARKDAYCYK 317423 >PHYCAscaffold_25 Length = 841216 Score = 28.1 bits (61), Expect = 7.4 Identities = 25/100 (25%), Positives = 45/100 (45%) Frame = -1 Query: 60 QRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMW 119 +R ++ A A D++ + L A R E+L AQ+ +++ +L+ E KIE+ Sbjct: 640444 RRDMEIADMARVEDILRRDLGILVAER----EDLAAQISSANDEVDRLQAEVGAAKIEIE 640277 Query: 120 DSMQEGKSYKGNAKKPQEEDSPGPSTSSVVLKRKSDRKPL 159 + + +G+ Q PG S S + + D PL Sbjct: 640276 ELQYTLRLTEGSLAYAQRAVDPGHS-GSATAEPQPDTSPL 640160 >PHYCAscaffold_106 Length = 144267 Score = 27.7 bits (60), Expect = 9.7 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +1 Query: 141 PGPSTSSVVLKRK--SDRKPLRGGGYNPLSGEGGGACSWR 178 PG S+ + V R SDR P G GEGGGAC R Sbjct: 100357 PGDSSVASVTVRVEVSDRSPELHGQLLVAIGEGGGACGGR 100476 >PHYCAscaffold_100 Length = 129988 Score = 27.7 bits (60), Expect = 9.7 Identities = 20/61 (32%), Positives = 30/61 (49%) Frame = -1 Query: 90 QEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKPQEEDSPGPSTSSVV 149 +E LNA+ E +EK K+ EEE ++ D +E K + NA+ PQ T + Sbjct: 29422 EEVLNARRESLEEKKKREEEELLKELKRATD--EEKKIIERNAEPPQPTAPEATDTDELS 29249 Query: 150 L 150 L Sbjct: 29248 L 29246 >PHYCAscaffold_87 Length = 182599 Score = 27.7 bits (60), Expect = 9.7 Identities = 18/79 (22%), Positives = 33/79 (41%) Frame = +3 Query: 56 RALRQRQLDRAAAAVEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQK 115 + LRQ Q + E + VKR++ L +Q + AQ + + + +++ K Sbjct: 62811 KRLRQLQQQKRRVGSEEEQSVKRRKEQQQEELMLQRRITAQTKTVRSSPTSKSDTEKQGK 62990 Query: 116 IEMWDSMQEGKSYKGNAKK 134 + G S+ G KK Sbjct: 62991 RATATGAKVGFSFGGGMKK 63047 >PHYCAscaffold_43 Length = 531961 Score = 27.7 bits (60), Expect = 9.7 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +3 Query: 27 GSLLATYGWYIVFSCILLYVVFQKLFARLRALRQRQLDRAAAAVE 71 G LL + WY+ + C++L A L QLDR A E Sbjct: 204939 GELLHVFIWYVYWYCLVLTTCIVVCGAPSATLAASQLDRQVDAFE 205073 >PHYCAscaffold_39 Length = 591971 Score = 27.7 bits (60), Expect = 9.7 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = -1 Query: 70 VEPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEM 118 ++PD KR + A R K +E + ++ KE QLE++ R+ ++E+ Sbjct: 114809 LKPDTGAKRALSKALRREKQREGMVRLRKRQKEWAIQLEKDTRQLRVEV 114663 >PHYCAscaffold_35 Length = 603175 Score = 27.7 bits (60), Expect = 9.7 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +3 Query: 158 PLRGGGYNPLSGEGGGACSWRPGRRG 183 P R GG S GGG C W+ + G Sbjct: 527055 PPREGGQGETSAAGGGYCEWQSAQDG 527132 >PHYCAscaffold_30 Length = 669438 Score = 27.7 bits (60), Expect = 9.7 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%) Frame = -2 Query: 65 RAAAAVEPDVV--VKRQEALAAARLKMQEE--LNAQVEKHKEKLKQL 107 + A + PD + VK++ A+ ++ Q++ L AQV+K KEK K++ Sbjct: 152756 KVCAEILPDNINDVKKRHAIVSSERATQDQRRLEAQVQKLKEKYKRI 152616 >PHYCAscaffold_9 Length = 1114135 Score = 27.7 bits (60), Expect = 9.7 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 8/52 (15%) Frame = +2 Query: 46 VVFQKL--------FARLRALRQRQLDRAAAAVEPDVVVKRQEALAAARLKM 89 VVFQ L R+ +R R R PD VV QEAL+ R K+ Sbjct: 684905 VVFQHLHLALGRL*IGRVLGIRARNQTRIRLGSRPDAVVVVQEALSTTRRKL 685060 >PHYCAscaffold_8 Length = 1194346 Score = 27.7 bits (60), Expect = 9.7 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 8/96 (8%) Frame = +1 Query: 87 LKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGNAKKP------QEEDS 140 LK QE++ ++ K K K + + + ++ + K+ +EEDS Sbjct: 619177 LKPQEKVKVAIDPAPVKRKPGRPPKAKTAVRKSQTARKSSQEAADVKEAPASTQEEEEDS 619356 Query: 141 PGPSTSSVVLKRK--SDRKPLRGGGYNPLSGEGGGA 174 GP+ S +K K S + P + G +S G A Sbjct: 619357 AGPALSKEEIKAKVASRKTPKKKGADETVSTVGATA 619464 >PHYCAscaffold_7 Length = 1368812 Score = 27.7 bits (60), Expect = 9.7 Identities = 16/67 (23%), Positives = 33/67 (49%) Frame = +1 Query: 72 PDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEEKRRQKIEMWDSMQEGKSYKGN 131 P + +++A A + K Q E ++++ +E + EEEKR ++ + + + + N Sbjct: 968242 PSLQGPKKKAKAPKKTKEQIEEERRLQEEEEARLRAEEEKRTEEARLKREAEAARRREEN 968421 Query: 132 AKKPQEE 138 AK E Sbjct: 968422 AKNRAAE 968442 Database: P.capsici/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 64,023,748 Number of sequences in database: 917 Lambda K H 0.314 0.132 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,066,917 Number of Sequences: 917 Number of extensions: 180968 Number of successful extensions: 1370 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 69 Number of HSP's that attempted gapping in prelim test: 659 Number of HSP's gapped (non-prelim): 1075 length of query: 190 length of database: 21,341,249 effective HSP length: 99 effective length of query: 91 effective length of database: 21,250,466 effective search space: 1933792406 effective search space used: 1933792406 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 60 (27.7 bits)