TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Xenopus tropicalis precursor
         (133 letters)

Database: D.fasciculatum/genome.fa 
           25 sequences; 31,019,208 total letters

Searching.........................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced ...    29   0.79 
gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced ...    28   2.3  
gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced ...    26   8.7  
gi|328869808|gb|GL883018.1| Dictyostelium fasciculatum unplaced ...    26   8.7  
gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced ...    26   8.7  

>gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced genomic
               scaffold Scf_EU5ZYIE02H8LDV-5, whole genome shotgun sequence
          Length = 1919465

 Score = 29.3 bits (64), Expect = 0.79
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +2

Query: 27      IARGKVESCGGXQLNRLKEVKAFVTDDLPLYHNLEMKHIPGADPELVLITSK 78
               IAR  ++S     +NRLK      TD++P+Y N  +  I  A+ ELV +T K
Sbjct: 1322528 IARSALQSI---LINRLK------TDNIPVYFNKSLVAISQAENELVTLTFK 1322656


>gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_Dfasci-G-p-12c09.r1-3, whole genome shotgun
              sequence
          Length = 1770755

 Score = 27.7 bits (60), Expect = 2.3
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = +3

Query: 86     PLRDMKRSEIIQLLKDLGFYR----KSSPDALVPAEFKMAPARASGDKKEDL 133
              P+ D+K+ EII  +KDL   R    ++      P EF   P R    K  DL
Sbjct: 403122 PICDLKKQEIIYTIKDLNNERWIDKRNGEQVKDPFEFINGPNRTYDQKALDL 403277



 Score = 26.6 bits (57), Expect = 5.1
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
 Frame = -1

Query: 45     EVKAFVTDDLPLYHNLEMKHIPG----ADPELVLITSKYEELERIPLRDMKRSEIIQLLK 100
              ++  F  D LPLY  L MKHI              T + EELE     D    E I LLK
Sbjct: 706439 KIMKFAKDILPLYLPLLMKHIYSELGIRSGSRDTDTKEEEELEEDEELDQNIEETIWLLK 706260

Query: 101    DL 102
               +
Sbjct: 706259 KI 706254



 Score = 25.8 bits (55), Expect = 8.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 53      DLPLYHNLEMKHIPGADPELVL-ITSKYEELERIPLRD 89
               DLPL HNL ++ IP    + +L +T     L+R+ L +
Sbjct: 1224554 DLPLLHNLRLRTIPRDGSKNILEMTRGLPSLKRLQLEN 1224441


>gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced genomic
               scaffold Scf_ET2XIPL01COFD4-5, whole genome shotgun sequence
          Length = 3468650

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 27      IARGKVESCGGXQLNRLKEVKAFVTDDLPLYHNLEMK 63
               ++ G + +CGG  +  +  V A +  D P+YHN  +K
Sbjct: 3254374 LSLGIILACGGLGIVLVPFVFARIIPDKPIYHNNILK 3254484


>gi|328869808|gb|GL883018.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_Dfasci-G-b-285a01.f1-5, whole genome shotgun
              sequence
          Length = 1327167

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 1      MWRPLLLLGLLQPILGYQIDWNK 23
              +W P+L+L   Q  + YQ+ W++
Sbjct: 271795 IWMPVLILHRFQNPINYQLQWHR 271727


>gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced genomic
               scaffold Scf_Dfasci-F-a-25c12.r2-5, whole genome shotgun
               sequence
          Length = 4166812

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -3

Query: 72      LVLITSKYEELERIPLRDMKRSEIIQLLKDLGFYRKSSPD 111
               LV  TS    L+ IP+ + KR     +LK +  YRKSSP+
Sbjct: 1284671 LVKPTSVLFPLQYIPISESKR-----ILKLVQLYRKSSPN 1284567


  Database: D.fasciculatum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,019,208
  Number of sequences in database:  25
  
Lambda     K      H
   0.320    0.141    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,340,411
Number of Sequences: 25
Number of extensions: 50341
Number of successful extensions: 194
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 169
Number of HSP's gapped (non-prelim): 78
length of query: 133
length of database: 10,339,736
effective HSP length: 89
effective length of query: 44
effective length of database: 10,337,511
effective search space: 454850484
effective search space used: 454850484
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)