TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Takifugu rubripes
         (120 letters)

Database: I.multifiliis_strain_G5/genome.fa 
           2017 sequences; 48,799,969 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|340500856|gb|GL984330.1| Ichthyophthirius multifiliis unplace...    27   4.3  
gi|340501044|gb|GL984312.1| Ichthyophthirius multifiliis unplace...    27   4.3  
gi|340504581|gb|GL983922.1| Ichthyophthirius multifiliis unplace...    27   4.3  
gi|340503600|gb|GL984047.1| Ichthyophthirius multifiliis unplace...    27   5.6  
gi|340505417|gb|GL983820.1| Ichthyophthirius multifiliis unplace...    26   9.5  

>gi|340500856|gb|GL984330.1| Ichthyophthirius multifiliis unplaced genomic
              scaffold scaff_1120509251369, whole genome shotgun sequence
          Length = 187948

 Score = 26.9 bits (58), Expect = 4.3
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 6      NVKAFVTQDIPLYHNLVMKHIPGADPELVLLNHYYEELDRIALSDM 51
              N+  F  +D+PL+H ++    P  +PE       Y ELD   + +M
Sbjct: 159238 NLPKFTFKDVPLFHAILSDLFPNVNPE----*PNYGELDIAIMEEM 159363


>gi|340501044|gb|GL984312.1| Ichthyophthirius multifiliis unplaced
            genomic scaffold scaff_1120509251351, whole genome
            shotgun sequence
          Length = 166975

 Score = 26.9 bits (58), Expect = 4.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 6    NVKAFVTQDIPLYHNLVMKHIPGAD 30
            NV  F+  D+PL+ N+++   PG +
Sbjct: 6942 NVPKFLKDDLPLFENIMLDLFPGVE 7016


>gi|340504581|gb|GL983922.1| Ichthyophthirius multifiliis unplaced
             genomic scaffold scaff_1120509250958, whole genome shotgun
             sequence
          Length = 70021

 Score = 26.9 bits (58), Expect = 4.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 4     NRNVKAFVTQDIPLYHNLVMKHIPGADPELVLLNHYYEELDRIALS 49
             NRN+ +F+  +I L HN            ++LLN+ Y  L RI +S
Sbjct: 31682 NRNLFSFILINIFLIHN------------MILLNYSYNSLKRIYIS 31581


>gi|340503600|gb|GL984047.1| Ichthyophthirius multifiliis unplaced
             genomic scaffold scaff_1120509251085, whole genome shotgun
             sequence
          Length = 26236

 Score = 26.6 bits (57), Expect = 5.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 6     NVKAFVTQDIPLYHNLVMKHIPGAD 30
             NV  F+  DIPL+ N++    PG +
Sbjct: 24487 NVPKFLKDDIPLFENIINDLFPGIE 24413


>gi|340505417|gb|GL983820.1| Ichthyophthirius multifiliis unplaced
            genomic scaffold scaff_1120509250856, whole genome
            shotgun sequence
          Length = 4471

 Score = 25.8 bits (55), Expect = 9.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 1    KNINRNVKAFVTQDIPLYHNLVMKH 25
            K +N N+K F+ + I +Y+N +  H
Sbjct: 1338 KILNLNIKYFILKQINIYNNKIYNH 1412


  Database: I.multifiliis_strain_G5/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 48,799,969
  Number of sequences in database:  2017
  
Lambda     K      H
   0.312    0.132    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,236,837
Number of Sequences: 2017
Number of extensions: 61167
Number of successful extensions: 107
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 64
Number of HSP's gapped (non-prelim): 48
length of query: 120
length of database: 16,266,656
effective HSP length: 89
effective length of query: 31
effective length of database: 16,087,143
effective search space: 498701433
effective search space used: 498701433
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)