TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ostreococcus tauri
         (125 letters)

Database: S.arctica/genome.fa 
           15,618 sequences; 121,588,341 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercont1.124 of Sphaeroforma arctica JP610                           35   0.037
supercont1.13419 of Sphaeroforma arctica JP610                         32   0.31 
supercont1.3 of Sphaeroforma arctica JP610                             29   2.0  
supercont1.140 of Sphaeroforma arctica JP610                           28   3.5  
supercont1.1393 of Sphaeroforma arctica JP610                          27   7.7  

>supercont1.124 of Sphaeroforma arctica JP610
          Length = 143253

 Score = 35.0 bits (79), Expect = 0.037
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -3

Query: 34    YARAQFQSCPGXRLNRLPEIKAFIKDVVEVGKYGDKVSVLWTHGHAPTIH 83
             Y R+  + C    L    ++KAF  DV+++ K+      L TH HAP I+
Sbjct: 80002 YHRSSVEVCDVIGLFTFDQLKAFHNDVLKIKKFSADTKSLHTHTHAPLIN 79853


>supercont1.13419 of Sphaeroforma arctica JP610
          Length = 656

 Score = 32.0 bits (71), Expect = 0.31
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +1

Query: 51  PEIKAFIKDVVEVGKYGDKVSVLWTHGHAPTIHMQDDKGTNVESVVLTSEWTVD 104
           PEI  F  DVV    +GD     W +GHA T H+Q  K   +E+++ T+ W +D
Sbjct: 22  PEIGGFQPDVV----WGDFNFKAWKYGHASTNHVQRMK--TIETILRTT-WHLD 162


>supercont1.3 of Sphaeroforma arctica JP610
          Length = 323879

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = -1

Query: 22     CASSALAESATSYARAQFQSCPGXRLNRLPEIKAFIKDVVEVGKYGDKVSVLW 74
              C SS LA     Y+ + F+     R+ R+P + A +KDV+  G+Y   +S+L+
Sbjct: 244319 CKSSTLACRRR*YSYSAFR-----RVIRMPSLPACMKDVISPGEYILVISLLF 244176


>supercont1.140 of Sphaeroforma arctica JP610
          Length = 135964

 Score = 28.5 bits (62), Expect = 3.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 8      SSASFLFAFVLFLACASSALAESATSYA 35
              S+ ++ FAF++F AC+S  +   A SYA
Sbjct: 113020 SAYNY*FAFLIFFACSSKYMDSQAMSYA 112937


>supercont1.1393 of Sphaeroforma arctica JP610
          Length = 15963

 Score = 27.3 bits (59), Expect = 7.7
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -2

Query: 38    QFQSCPGXRLNRLPEIKAFI--KDVVEVGKYGDKVSVLWTHGHAPTIHMQ 85
             Q+ + P    N LP  +A+I     +E  +Y    S LW H H    H Q
Sbjct: 11918 QYTTKPSNLYNVLPNHRAYIIYYQTIESIQYTTNPSSLWYHAHTNLCHGQ 11769


  Database: S.arctica/genome.fa
    Posted date:  Nov 21, 2011  7:47 PM
  Number of letters in database: 121,588,341
  Number of sequences in database:  15,618
  
Lambda     K      H
   0.318    0.130    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,385,438
Number of Sequences: 15618
Number of extensions: 208903
Number of successful extensions: 906
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of query: 125
length of database: 40,529,447
effective HSP length: 95
effective length of query: 30
effective length of database: 39,045,737
effective search space: 1171372110
effective search space used: 1171372110
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)