TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ostreococcus tauri
         (125 letters)

Database: A.rara/genome.fa 
           3231 sequences; 1,450,095 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|330847613|gb|ADNL01002990.1| Astrammina rara contig00566, who...    23   2.7  
gi|330849017|gb|ADNL01001586.1| Astrammina rara contig01880, who...    22   3.5  
gi|330848219|gb|ADNL01002384.1| Astrammina rara contig02843, who...    22   4.5  
gi|330850524|gb|ADNL01000079.1| Astrammina rara contig00082, who...    22   4.5  
gi|330849735|gb|ADNL01000868.1| Astrammina rara contig01007, who...    22   5.9  
gi|330847571|gb|ADNL01003032.1| Astrammina rara contig01055, who...    21   7.7  
gi|330847737|gb|ADNL01002866.1| Astrammina rara contig00994, who...    21   7.7  
gi|330849502|gb|ADNL01001101.1| Astrammina rara contig01291, who...    21   7.7  
gi|330850545|gb|ADNL01000058.1| Astrammina rara contig00061, who...    21   7.7  

>gi|330847613|gb|ADNL01002990.1| Astrammina rara contig00566, whole
            genome shotgun sequence
          Length = 2708

 Score = 22.7 bits (47), Expect = 2.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 20   LACASSALAESATSYARAQFQSCPGXR 46
            LAC+ S    S  S  + + +SC G R
Sbjct: 1304 LACSHSQFTSSFCSLEKPECRSCDGRR 1384


>gi|330849017|gb|ADNL01001586.1| Astrammina rara contig01880, whole
           genome shotgun sequence
          Length = 428

 Score = 22.3 bits (46), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 17  VLFLACASSALAESATSYARAQF 39
           VLF  C S + A S+TS   A +
Sbjct: 140 VLFCTCCSVSSASSSTSQRHADY 72


>gi|330848219|gb|ADNL01002384.1| Astrammina rara contig02843, whole
           genome shotgun sequence
          Length = 4052

 Score = 21.9 bits (45), Expect = 4.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 9   SASFLFAFVLFLACASSALAESATSYARAQFQSCPGXRLNRLPEIK 54
           +A+    F   L C S+  A   +  A AQF S  G R N LP+ K
Sbjct: 387 NANGCLLFSTHLQC-STFFARFVSLCASAQFGSVWGFRGNLLPQRK 253


>gi|330850524|gb|ADNL01000079.1| Astrammina rara contig00082, whole
            genome shotgun sequence
          Length = 9033

 Score = 21.9 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 73   LWTHGHAPTIHMQDDKG 89
            LW  GH PT+  Q  +G
Sbjct: 4041 LWLGGHLPTLCCQGKEG 4091


>gi|330849735|gb|ADNL01000868.1| Astrammina rara contig01007, whole
           genome shotgun sequence
          Length = 1183

 Score = 21.6 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 63  VGKYGDKVSVLWTHG 77
           VG+Y    SV W HG
Sbjct: 818 VGRYCPSYSVSWCHG 774


>gi|330847571|gb|ADNL01003032.1| Astrammina rara contig01055, whole
           genome shotgun sequence
          Length = 726

 Score = 21.2 bits (43), Expect = 7.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 74  WTHGHAPTIHMQDDKGTNVESVVLTSEW 101
           WT      +H   D GTN++++     W
Sbjct: 21  WTKKGGGYMHPFGDHGTNMDAIQFHHYW 104


>gi|330847737|gb|ADNL01002866.1| Astrammina rara contig00994, whole
           genome shotgun sequence
          Length = 872

 Score = 21.2 bits (43), Expect = 7.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 64  GKYGDKVSVLWTHGHAPTIH 83
           G Y    SVLW H  + T H
Sbjct: 704 GIYRSHESVLWWHQSSTTTH 645


>gi|330849502|gb|ADNL01001101.1| Astrammina rara contig01291, whole
           genome shotgun sequence
          Length = 872

 Score = 21.2 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 65  KYGDKVSVLWTHGHAPTIH 83
           +YG+K  VLW  G     H
Sbjct: 637 RYGEKRQVLWL*GQVRRTH 581


>gi|330850545|gb|ADNL01000058.1| Astrammina rara contig00061, whole
            genome shotgun sequence
          Length = 9271

 Score = 21.2 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 8    SSASFLFAFVLFLACASSA 26
            S +SF+F ++  LAC + A
Sbjct: 5116 SGSSFVFLWLCLLACCTMA 5172


  Database: A.rara/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 1,450,095
  Number of sequences in database:  3231
  
Lambda     K      H
   0.318    0.130    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,923
Number of Sequences: 3231
Number of extensions: 2083
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 125
length of database: 483,365
effective HSP length: 65
effective length of query: 60
effective length of database: 273,350
effective search space: 16401000
effective search space used: 16401000
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 42 (20.8 bits)