TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= seed9complete.gi|122131144|sp|A0APL6|A0APL6_DROME CG7484
protein
         (178 letters)

Database: G.niphandrodes/genome.fa 
           3680 sequences; 15,362,869 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|338242958|gb|AFNH01001686.1| Gregarina niphandrodes asmbl.248...    28   1.7  
gi|338240541|gb|AFNH01002895.1| Gregarina niphandrodes asmbl.360...    28   2.2  
gi|338243528|gb|AFNH01001401.1| Gregarina niphandrodes asmbl.222...    28   2.2  
gi|338241524|gb|AFNH01002403.1| Gregarina niphandrodes asmbl.314...    27   2.8  
gi|338242037|gb|AFNH01002146.1| Gregarina niphandrodes asmbl.290...    27   3.7  
gi|338244699|gb|AFNH01000815.1| Gregarina niphandrodes asmbl.169...    27   3.7  
gi|338241089|gb|AFNH01002622.1| Gregarina niphandrodes asmbl.334...    27   4.8  
gi|338239431|gb|AFNH01003450.1| Gregarina niphandrodes asmbl.79,...    26   6.3  
gi|338240171|gb|AFNH01003081.1| Gregarina niphandrodes asmbl.457...    26   6.3  
gi|338241869|gb|AFNH01002230.1| Gregarina niphandrodes asmbl.298...    26   6.3  
gi|338242822|gb|AFNH01001754.1| Gregarina niphandrodes asmbl.255...    26   6.3  
gi|338242872|gb|AFNH01001729.1| Gregarina niphandrodes asmbl.252...    26   6.3  
gi|338244069|gb|AFNH01001130.1| Gregarina niphandrodes asmbl.198...    26   6.3  
gi|338245425|gb|AFNH01000453.1| Gregarina niphandrodes asmbl.140...    26   6.3  
gi|338239378|gb|AFNH01003477.1| Gregarina niphandrodes asmbl.813...    26   8.2  
gi|338242377|gb|AFNH01001976.1| Gregarina niphandrodes asmbl.275...    26   8.2  
gi|338242704|gb|AFNH01001813.1| Gregarina niphandrodes asmbl.260...    26   8.2  
gi|338245737|gb|AFNH01000297.1| Gregarina niphandrodes asmbl.126...    26   8.2  

>gi|338242958|gb|AFNH01001686.1| Gregarina niphandrodes asmbl.2488,
           whole genome shotgun sequence
          Length = 1672

 Score = 28.1 bits (61), Expect = 1.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 48  GLDTIKPQCKQCCTLDQQPAAQR 70
           GL T KP C +C TL  +PAA++
Sbjct: 992 GLPTGKPLCTRCSTLLSEPAARQ 924


>gi|338240541|gb|AFNH01002895.1| Gregarina niphandrodes asmbl.3602,
            whole genome shotgun sequence
          Length = 7129

 Score = 27.7 bits (60), Expect = 2.2
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +3

Query: 33   KAQLMCSSCEKLDDFGLDTIKPQCKQCCTLDQQPAAQRTYAKAILEVCT 81
            KA+L C +C KL ++       QC  C T++      +   + +  +C+
Sbjct: 6603 KARLQCHACGKLLEYDAGAQYVQCFSCSTMNAVQQKNQVGGRVLSMLCS 6749


>gi|338243528|gb|AFNH01001401.1| Gregarina niphandrodes asmbl.2226,
           whole genome shotgun sequence
          Length = 540

 Score = 27.7 bits (60), Expect = 2.2
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -3

Query: 10  LALSCQQIQAELTAADCRSLGFIKAQLMCSSCEKLDDFGLDTIKPQCKQC 59
           L L CQ +QA +T   CR L       +CS C +        I+ +C  C
Sbjct: 238 LCLICQDLQATITVLPCRHL------CLCSECSQ-------RIEEKCPVC 128


>gi|338241524|gb|AFNH01002403.1| Gregarina niphandrodes asmbl.3147,
            whole genome shotgun sequence
          Length = 10973

 Score = 27.3 bits (59), Expect = 2.8
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 21   LTAADCRSLGFIKAQLMCSSCEKLDDFGLDTIKPQCKQCCTLDQQPAAQRTYAKAILEV 79
            L   DC ++    A+ +    +K  +  L   K Q  +CC L +   A  TYA + LEV
Sbjct: 4202 LARLDCDAVELSTAESLRGEAKKKTEARL---KKQRAECCLLLKDAGAALTYAASALEV 4369


>gi|338242037|gb|AFNH01002146.1| Gregarina niphandrodes asmbl.2909,
           whole genome shotgun sequence
          Length = 2227

 Score = 26.9 bits (58), Expect = 3.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 123 SGKVQETLSITKWNTDTVEEFFETHL 148
           +GK+ +T ++T W T+T+E    T+L
Sbjct: 812 TGKLTQTPALTPWVTETIESVVGTYL 889


>gi|338244699|gb|AFNH01000815.1| Gregarina niphandrodes asmbl.1699,
           whole genome shotgun sequence
          Length = 1062

 Score = 26.9 bits (58), Expect = 3.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 123 SGKVQETLSITKWNTDTVEEFFETHL 148
           +GK+ +T ++T W T+T+E    T+L
Sbjct: 766 TGKLTQTPALTPWVTETIESVVGTYL 843


>gi|338241089|gb|AFNH01002622.1| Gregarina niphandrodes asmbl.3348,
            whole genome shotgun sequence
          Length = 10517

 Score = 26.6 bits (57), Expect = 4.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 144  FETHLAKDGAGKNSYSVVEDADGDDDEDY 172
            F   + KD +  + YS  ED D DDDEDY
Sbjct: 9779 FSVKVTKDNSYYDWYSDEEDED-DDDEDY 9696


>gi|338239431|gb|AFNH01003450.1| Gregarina niphandrodes asmbl.79,
           whole genome shotgun sequence
          Length = 1230

 Score = 26.2 bits (56), Expect = 6.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 122 ASGKVQETLSITKWNTDTVEEFFETHL 148
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 345 ATGKLTQIPALTPWVTETIESVVGTYL 425


>gi|338240171|gb|AFNH01003081.1| Gregarina niphandrodes asmbl.457,
           whole genome shotgun sequence
          Length = 1215

 Score = 26.2 bits (56), Expect = 6.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 122 ASGKVQETLSITKWNTDTVEEFFETHL 148
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 860 ATGKLTQIPALTPWVTETIESVVGTYL 940


>gi|338241869|gb|AFNH01002230.1| Gregarina niphandrodes asmbl.2985,
           whole genome shotgun sequence
          Length = 2098

 Score = 26.2 bits (56), Expect = 6.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 122 ASGKVQETLSITKWNTDTVEEFFETHL 148
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 719 ATGKLTQIPALTPWVTETIESVVGTYL 639


>gi|338242822|gb|AFNH01001754.1| Gregarina niphandrodes asmbl.2550,
             whole genome shotgun sequence
          Length = 48726

 Score = 26.2 bits (56), Expect = 6.3
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 59    CCTLDQQPAAQRTYAKAILEVCTCKFRAYPQIQAFIQSGRPAK 101
             CC  D  P +   +  ++   CT   R +P +   +  GRPA+
Sbjct: 22189 CCLRDSPPLS--CWLPSLSPCCTPSLRCWPWLAVGLTFGRPAR 22311


>gi|338242872|gb|AFNH01001729.1| Gregarina niphandrodes asmbl.2527,
            whole genome shotgun sequence
          Length = 7906

 Score = 26.2 bits (56), Expect = 6.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 59   CCTLDQQPAAQRTYAKAILEVCTCKFRAYPQI 90
            CC+L +Q       A+ +LEV  C+ R  P +
Sbjct: 3140 CCSLSRQTH*PTVLARRVLEVTLCQGRPRPPV 3045


>gi|338244069|gb|AFNH01001130.1| Gregarina niphandrodes asmbl.1982,
           whole genome shotgun sequence
          Length = 1276

 Score = 26.2 bits (56), Expect = 6.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 122 ASGKVQETLSITKWNTDTVEEFFETHL 148
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 608 ATGKLTQIPALTPWVTETIESVVGTYL 528


>gi|338245425|gb|AFNH01000453.1| Gregarina niphandrodes asmbl.1405,
           whole genome shotgun sequence
          Length = 1116

 Score = 26.2 bits (56), Expect = 6.3
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 122 ASGKVQETLSITKWNTDTVEEFFETHL 148
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 707 AAGKLTQIPALTPWVTETIESVVGTYL 787


>gi|338239378|gb|AFNH01003477.1| Gregarina niphandrodes asmbl.813,
           whole genome shotgun sequence
          Length = 2003

 Score = 25.8 bits (55), Expect = 8.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 126 VQETLSITKWNTDTVEEF 143
           +Q TLS TKW  D +E+F
Sbjct: 628 LQSTLSATKWLIDAMEQF 575


>gi|338242377|gb|AFNH01001976.1| Gregarina niphandrodes asmbl.2753,
             whole genome shotgun sequence
          Length = 18440

 Score = 25.8 bits (55), Expect = 8.2
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -3

Query: 35    QLMCSSCEKLDDFGLDTIKPQCKQCCTLDQQPAAQRTYAKAILEVCTCK 83
             Q + S  +     GLD   P+  + CTL  +   Q  Y    LE+CT +
Sbjct: 14169 QAVDSQLKNPQAMGLD---PELSEVCTLTCKSVMQSIYNHYPLEICTAR 14032


>gi|338242704|gb|AFNH01001813.1| Gregarina niphandrodes asmbl.2604,
           whole genome shotgun sequence
          Length = 9186

 Score = 25.8 bits (55), Expect = 8.2
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +2

Query: 78  EVCTCKFRAYPQIQA---FIQSGRPAKFPNLQIKY 109
           E C C F   P IQA    +   RP K P LQ +Y
Sbjct: 875 EACDCPFGRQPSIQA*RRVVYILRP*KPPGLQERY 979


>gi|338245737|gb|AFNH01000297.1| Gregarina niphandrodes asmbl.1265,
           whole genome shotgun sequence
          Length = 1085

 Score = 25.8 bits (55), Expect = 8.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 123 SGKVQETLSITKWNTDTVEEFFETHL 148
           +GK  +  ++T W T+T+E    THL
Sbjct: 700 TGKSSQISALTPWVTETIESAAGTHL 777


  Database: G.niphandrodes/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 15,362,869
  Number of sequences in database:  3680
  
Lambda     K      H
   0.322    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,309,228
Number of Sequences: 3680
Number of extensions: 49791
Number of successful extensions: 276
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of query: 178
length of database: 5,120,956
effective HSP length: 88
effective length of query: 90
effective length of database: 4,797,116
effective search space: 431740440
effective search space used: 431740440
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)