TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= seed9.A0APL6_DROME/73-150
         (78 letters)

Database: G.niphandrodes/genome.fa 
           3680 sequences; 15,362,869 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|338242037|gb|AFNH01002146.1| Gregarina niphandrodes asmbl.290...    27   1.1  
gi|338244699|gb|AFNH01000815.1| Gregarina niphandrodes asmbl.169...    27   1.1  
gi|338239431|gb|AFNH01003450.1| Gregarina niphandrodes asmbl.79,...    26   1.9  
gi|338240171|gb|AFNH01003081.1| Gregarina niphandrodes asmbl.457...    26   1.9  
gi|338241869|gb|AFNH01002230.1| Gregarina niphandrodes asmbl.298...    26   1.9  
gi|338244069|gb|AFNH01001130.1| Gregarina niphandrodes asmbl.198...    26   1.9  
gi|338245425|gb|AFNH01000453.1| Gregarina niphandrodes asmbl.140...    26   1.9  
gi|338239378|gb|AFNH01003477.1| Gregarina niphandrodes asmbl.813...    26   2.4  
gi|338242704|gb|AFNH01001813.1| Gregarina niphandrodes asmbl.260...    26   2.4  
gi|338245737|gb|AFNH01000297.1| Gregarina niphandrodes asmbl.126...    26   2.4  
gi|338241576|gb|AFNH01002377.1| Gregarina niphandrodes asmbl.312...    25   4.2  
gi|338244091|gb|AFNH01001119.1| Gregarina niphandrodes asmbl.197...    25   5.5  
gi|338242556|gb|AFNH01001887.1| Gregarina niphandrodes asmbl.267...    24   7.1  
gi|338242684|gb|AFNH01001823.1| Gregarina niphandrodes asmbl.261...    24   7.1  
gi|338241067|gb|AFNH01002633.1| Gregarina niphandrodes asmbl.335...    24   9.3  
gi|338241456|gb|AFNH01002437.1| Gregarina niphandrodes asmbl.317...    24   9.3  
gi|338243220|gb|AFNH01001555.1| Gregarina niphandrodes asmbl.236...    24   9.3  

>gi|338242037|gb|AFNH01002146.1| Gregarina niphandrodes asmbl.2909,
           whole genome shotgun sequence
          Length = 2227

 Score = 26.9 bits (58), Expect = 1.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 51  SGKVQETLSITKWNTDTVEEFFETHL 76
           +GK+ +T ++T W T+T+E    T+L
Sbjct: 812 TGKLTQTPALTPWVTETIESVVGTYL 889


>gi|338244699|gb|AFNH01000815.1| Gregarina niphandrodes asmbl.1699,
           whole genome shotgun sequence
          Length = 1062

 Score = 26.9 bits (58), Expect = 1.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 51  SGKVQETLSITKWNTDTVEEFFETHL 76
           +GK+ +T ++T W T+T+E    T+L
Sbjct: 766 TGKLTQTPALTPWVTETIESVVGTYL 843


>gi|338239431|gb|AFNH01003450.1| Gregarina niphandrodes asmbl.79,
           whole genome shotgun sequence
          Length = 1230

 Score = 26.2 bits (56), Expect = 1.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 50  ASGKVQETLSITKWNTDTVEEFFETHL 76
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 345 ATGKLTQIPALTPWVTETIESVVGTYL 425


>gi|338240171|gb|AFNH01003081.1| Gregarina niphandrodes asmbl.457,
           whole genome shotgun sequence
          Length = 1215

 Score = 26.2 bits (56), Expect = 1.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 50  ASGKVQETLSITKWNTDTVEEFFETHL 76
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 860 ATGKLTQIPALTPWVTETIESVVGTYL 940


>gi|338241869|gb|AFNH01002230.1| Gregarina niphandrodes asmbl.2985,
           whole genome shotgun sequence
          Length = 2098

 Score = 26.2 bits (56), Expect = 1.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 50  ASGKVQETLSITKWNTDTVEEFFETHL 76
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 719 ATGKLTQIPALTPWVTETIESVVGTYL 639


>gi|338244069|gb|AFNH01001130.1| Gregarina niphandrodes asmbl.1982,
           whole genome shotgun sequence
          Length = 1276

 Score = 26.2 bits (56), Expect = 1.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 50  ASGKVQETLSITKWNTDTVEEFFETHL 76
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 608 ATGKLTQIPALTPWVTETIESVVGTYL 528


>gi|338245425|gb|AFNH01000453.1| Gregarina niphandrodes asmbl.1405,
           whole genome shotgun sequence
          Length = 1116

 Score = 26.2 bits (56), Expect = 1.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +2

Query: 50  ASGKVQETLSITKWNTDTVEEFFETHL 76
           A+GK+ +  ++T W T+T+E    T+L
Sbjct: 707 AAGKLTQIPALTPWVTETIESVVGTYL 787


>gi|338239378|gb|AFNH01003477.1| Gregarina niphandrodes asmbl.813,
           whole genome shotgun sequence
          Length = 2003

 Score = 25.8 bits (55), Expect = 2.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 54  VQETLSITKWNTDTVEEF 71
           +Q TLS TKW  D +E+F
Sbjct: 628 LQSTLSATKWLIDAMEQF 575


>gi|338242704|gb|AFNH01001813.1| Gregarina niphandrodes asmbl.2604,
           whole genome shotgun sequence
          Length = 9186

 Score = 25.8 bits (55), Expect = 2.4
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +2

Query: 6   EVCTCKFRAYPQIQA---FIQSGRPAKFPNLQIKY 37
           E C C F   P IQA    +   RP K P LQ +Y
Sbjct: 875 EACDCPFGRQPSIQA*RRVVYILRP*KPPGLQERY 979


>gi|338245737|gb|AFNH01000297.1| Gregarina niphandrodes asmbl.1265,
           whole genome shotgun sequence
          Length = 1085

 Score = 25.8 bits (55), Expect = 2.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 51  SGKVQETLSITKWNTDTVEEFFETHL 76
           +GK  +  ++T W T+T+E    THL
Sbjct: 700 TGKSSQISALTPWVTETIESAAGTHL 777


>gi|338241576|gb|AFNH01002377.1| Gregarina niphandrodes asmbl.3120,
            whole genome shotgun sequence
          Length = 25466

 Score = 25.0 bits (53), Expect = 4.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 11   KFRAYPQIQAFIQSGRPAKFPNLQIKYVRGLDP 43
            K+  YP +        PA++PN+   +V GL P
Sbjct: 8903 KYSGYPPVGPQYNMPDPAQYPNMVPGFVPGLVP 9001


>gi|338244091|gb|AFNH01001119.1| Gregarina niphandrodes
          asmbl.1972, whole genome shotgun sequence
          Length = 1284

 Score = 24.6 bits (52), Expect = 5.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 50 ASGKVQETLSITKWNTDTVEEFFETH 75
          A+GK+ +  ++T W T+T+E    T+
Sbjct: 79 ATGKLTQIPALTPWVTETIESVVGTY 2


>gi|338242556|gb|AFNH01001887.1| Gregarina niphandrodes asmbl.2672,
            whole genome shotgun sequence
          Length = 7298

 Score = 24.3 bits (51), Expect = 7.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 10   CKFRAYPQIQAFIQSGRP 27
            CK R YPQ Q F +S  P
Sbjct: 4317 CKCRLYPQFQRFHRSNCP 4264


>gi|338242684|gb|AFNH01001823.1| Gregarina niphandrodes asmbl.2613,
            whole genome shotgun sequence
          Length = 17822

 Score = 24.3 bits (51), Expect = 7.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 1    AKAILEVCTCKFRA 14
            A ++LE+C C+FR+
Sbjct: 3370 AASVLEICACRFRS 3411


>gi|338241067|gb|AFNH01002633.1| Gregarina niphandrodes asmbl.3359,
            whole genome shotgun sequence
          Length = 62082

 Score = 23.9 bits (50), Expect = 9.3
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 25   GRPAKFPNLQIKYVRGLDPVVKLLDASGKVQETLSITKWNTDT 67
            G PA  P   I ++RG  P++  LD     +       WNT T
Sbjct: 6431 GNPATTPTDVIDWIRGRLPIMSFLD----FELYEDAFNWNTPT 6315


>gi|338241456|gb|AFNH01002437.1| Gregarina niphandrodes asmbl.3178,
             whole genome shotgun sequence
          Length = 20867

 Score = 23.9 bits (50), Expect = 9.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 30    FPNLQIKYVRGLDPVVKLLDASGKVQETLS 59
             F  +  + VRGL P VK+L       +TLS
Sbjct: 20697 FARMSPEVVRGLTPSVKILPVPRPCPQTLS 20608


>gi|338243220|gb|AFNH01001555.1| Gregarina niphandrodes asmbl.2368,
            whole genome shotgun sequence
          Length = 11263

 Score = 23.9 bits (50), Expect = 9.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 57   TLSITKWNTDTVEEFFE 73
            TL I+ W TDTV E  +
Sbjct: 2060 TLMISSWKTDTVPEMMQ 2010


  Database: G.niphandrodes/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 15,362,869
  Number of sequences in database:  3680
  
Lambda     K      H
   0.321    0.135    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,284,356
Number of Sequences: 3680
Number of extensions: 12310
Number of successful extensions: 72
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of query: 78
length of database: 5,120,956
effective HSP length: 52
effective length of query: 26
effective length of database: 4,929,596
effective search space: 128169496
effective search space used: 128169496
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)