TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= seed9.A0APL6_DROME/73-150
         (78 letters)

Database: D.fasciculatum/genome.fa 
           25 sequences; 31,019,208 total letters

Searching.........................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced ...    43   3e-05
gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced ...    26   3.8  
gi|328870851|gb|GL883015.1| Dictyostelium fasciculatum unplaced ...    26   3.8  
gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced ...    25   6.4  

>gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_EU5ZYIE02H8LDV-5, whole genome shotgun
              sequence
          Length = 1919465

 Score = 43.1 bits (100), Expect = 3e-05
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = -3

Query: 2      KAILEVCTCKFRAYPQIQAFIQSGRPAKFPNLQIKYVRGLDPVVKLLDASGKVQETLSIT 61
              KAIL +C  +  A+P I+ F+   +  ++   + ++  G +P ++L D+ G   ET++I 
Sbjct: 177096 KAILYICR*RMGAFPHIKEFVDK-KAREYTKFEHQHEPGANPRLELHDSEG-ATETINIE 176923

Query: 62     KWNTDTVEEF 71
               W T+ +EEF
Sbjct: 176922 SWKTEHLEEF 176893


>gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced genomic
               scaffold Scf_ET2XIPL01COFD4-5, whole genome shotgun sequence
          Length = 3468650

 Score = 26.2 bits (56), Expect = 3.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 9       TCKFRAYPQIQAFIQSGRPAKFP 31
               TC  R+ P IQA   S RP+K P
Sbjct: 2564380 TCSRRSLPTIQACCLSARPSKRP 2564312


>gi|328870851|gb|GL883015.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_Dfasci-G-b-126g04.f1-5, whole genome shotgun
              sequence
          Length = 499581

 Score = 26.2 bits (56), Expect = 3.8
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 41     LDPVVKLLDASGKVQETLSITK-WNTDTVEEFFET 74
              LDP    L A+    ET++  K W TDTVE++  T
Sbjct: 468461 LDPSPPTLFATNLTNETINQRKKWFTDTVEKYSPT 468565


>gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced genomic
               scaffold Scf_Dfasci-G-p-12c09.r1-3, whole genome shotgun
               sequence
          Length = 1770755

 Score = 25.4 bits (54), Expect = 6.4
 Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 19/74 (25%)
 Frame = -3

Query: 14      AYPQIQAFIQSGRPAKF------------PNLQIKYVRGLD-------PVVKLLDASGKV 54
               AY Q+  F+ + +  ++            PNL+  Y++G+D        +VK+++    +
Sbjct: 1466727 AYQQVNYFVNNNQQERYGMFDYSILPLFLPNLKTIYIKGVDASKEAIQDIVKVINLFPHI 1466548

Query: 55      QETLSITKWNTDTV 68
               Q  L +T ++   V
Sbjct: 1466547 QVILHMTIYSQSNV 1466506


  Database: D.fasciculatum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,019,208
  Number of sequences in database:  25
  
Lambda     K      H
   0.321    0.135    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,359,421
Number of Sequences: 25
Number of extensions: 19219
Number of successful extensions: 83
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 75
Number of HSP's gapped (non-prelim): 27
length of query: 78
length of database: 10,339,736
effective HSP length: 53
effective length of query: 25
effective length of database: 10,338,411
effective search space: 258460275
effective search space used: 258460275
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)