TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|241685802|ref|XP_002412809.1| salivary selenoprotein
precursor, putative [Ixodes scapularis]
         (150 letters)

Database: D.fasciculatum/genome.fa 
           25 sequences; 31,019,208 total letters

Searching.........................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced ...    49   1e-06
gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced ...    27   4.0  
gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced ...    27   6.8  

>gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_EU5ZYIE02H8LDV-5, whole genome shotgun
              sequence
          Length = 1919465

 Score = 49.3 bits (116), Expect = 1e-06
 Identities = 26/78 (33%), Positives = 45/78 (57%)
 Frame = -3

Query: 70     KRYPRAVLEVCACKFGHMPQIEAFVRGPKHKRFPKLSIKYLRGADPIIKLMDDRGEVQEE 129
              K Y +A+L +C  + G  P I+ FV   K + + K   ++  GA+P ++L D  G   E 
Sbjct: 177108 KTYVKAILYICR*RMGAFPHIKEFV-DKKAREYTKFEHQHEPGANPRLELHDSEGAT-ET 176935

Query: 130    LSIKKWDTDTIEEFLLEH 147
              ++I+ W T+ +EEFL ++
Sbjct: 176934 INIESWKTEHLEEFLRDN 176881


>gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_Dfasci-G-o-33e01.r1-3, whole genome shotgun
              sequence
          Length = 1429294

 Score = 27.3 bits (59), Expect = 4.0
 Identities = 19/67 (28%), Positives = 26/67 (38%)
 Frame = -2

Query: 42     RGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKHKR 101
              RGL  FDLD+     H C     ++     Y          K  H  Q+  F   PK K 
Sbjct: 627219 RGLCIFDLDIYLFIVHFCVKAIINQSYHVTYTH--------KHTHNNQLSIFFS*PKKKN 627064

Query: 102    FPKLSIK 108
              F K+ ++
Sbjct: 627063 FKKIDLR 627043


>gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced genomic
               scaffold Scf_Dfasci-G-o-80e12.f1-5, whole genome shotgun
               sequence
          Length = 2750715

 Score = 26.6 bits (57), Expect = 6.8
 Identities = 19/72 (26%), Positives = 28/72 (38%)
 Frame = -3

Query: 34      PDLACASCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAF 93
               P++    CR      L + R    RC         P+RYPR   +V      H+P     
Sbjct: 1570237 PNVTIVRCRPRPPNQLQVCRRLPRRCQEDPILGIHPRRYPRHCRQVARDCCSHLPYRLQR 1570058

Query: 94      VRGPKHKRFPKL 105
                +G   +R P+L
Sbjct: 1570057 WQGTSRRRQPRL 1570022


  Database: D.fasciculatum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,019,208
  Number of sequences in database:  25
  
Lambda     K      H
   0.327    0.143    0.454 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,911,503
Number of Sequences: 25
Number of extensions: 85388
Number of successful extensions: 457
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 449
Number of HSP's gapped (non-prelim): 87
length of query: 150
length of database: 10,339,736
effective HSP length: 91
effective length of query: 59
effective length of database: 10,337,461
effective search space: 609910199
effective search space used: 609910199
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)