TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|241685802|ref|XP_002412809.1| salivary selenoprotein precursor, putative [Ixodes scapularis] (150 letters) Database: C.fasciculata/genome.fa 1089 sequences; 37,048,325 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value Cf_Contig785 | | 1 to 197696 42 2e-04 Cf_Contig1069 | | 1 to 371363 31 0.42 Cf_Contig998 | | 1 to 108114 31 0.42 Cf_Contig1055 | | 1 to 461976 30 0.94 Cf_Contig1029 | | 1 to 84437 29 1.6 Cf_Contig1070 | | 1 to 336028 28 2.1 Cf_Contig1049 | | 1 to 302556 28 2.1 Cf_Contig1048 | | 1 to 336746 28 2.7 Cf_Contig1018 | | 1 to 165852 28 3.6 Cf_Contig901 | | 1 to 176845 28 3.6 Cf_Contig821 | | 1 to 27018 28 3.6 Cf_Contig784 | | 1 to 103312 28 3.6 Cf_Contig587 | | 1 to 17190 28 3.6 Cf_Contig333 | | 1 to 29241 28 3.6 Cf_Contig1053 | | 1 to 375645 27 4.7 Cf_Contig1039 | | 1 to 222123 27 4.7 Cf_Contig1038 | | 1 to 213895 27 4.7 Cf_Contig1005 | | 1 to 178835 27 4.7 Cf_Contig984 | | 1 to 150484 27 4.7 Cf_Contig1064 | | 1 to 131218 27 6.1 Cf_Contig1054 | | 1 to 431369 27 6.1 Cf_Contig1041 | | 1 to 166514 27 6.1 Cf_Contig1040 | | 1 to 176268 27 6.1 Cf_Contig983 | | 1 to 191195 27 6.1 Cf_Contig1071 | | 1 to 673414 27 8.0 Cf_Contig1052 | | 1 to 356154 27 8.0 Cf_Contig1022 | | 1 to 227790 27 8.0 Cf_Contig989 | | 1 to 189394 27 8.0 Cf_Contig865 | | 1 to 83857 27 8.0 Cf_Contig860 | | 1 to 127378 27 8.0 Cf_Contig838 | | 1 to 82578 27 8.0 Cf_Contig819 | | 1 to 113412 27 8.0 Cf_Contig334 | | 1 to 14647 27 8.0 >Cf_Contig785 | | 1 to 197696 Length = 197696 Score = 41.6 bits (96), Expect = 2e-04 Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 9/148 (6%) Frame = -2 Query: 6 LYLQLLIAPLFALGDLSADECLALGFRKPDLACASCRGL-AAFDLDLLRDGCHRCCAHTQ 64 L L L + L + ++ ECL LGF K + C SC L L+ C CC T+ Sbjct: 22819 LALLLAVVALPSHAARTSAECLDLGFDKDVVRCTSCEKLFMVTHSSELQAECSDCCTATE 22640 Query: 65 DRDAPK--RYPRAVLEV----CACKFGHMPQIEAFVRG-PKHKRFPKLS-IKYLRGADPI 116 + A +YP A +EV A M + F R FP+L+ + P Sbjct: 22639 EDAAASSLKYPSARIEVRGVRRALDATSMGALAMFYRTFANELYFPRLTFVDKYTAMYPQ 22460 Query: 117 IKLMDDRGEVQEELSIKKWDTDTIEEFL 144 + L+D G+ I W +T+ EFL Sbjct: 22459 LVLVDADGKDALTWRIAGWAPETLHEFL 22376 Score = 29.3 bits (64), Expect = 1.2 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = -2 Query: 33 KPDLACAS-CRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYPRAVLEVC 80 + DL C A D++ R GC RC A + AP+ P A+L C Sbjct: 37936 RADLVCVGDAAATAGADIEGCR-GCGRCGACVASQPAPRNCPEALLNSC 37793 >Cf_Contig1069 | | 1 to 371363 Length = 371363 Score = 30.8 bits (68), Expect = 0.42 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = -1 Query: 51 LLRDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKHKRFPKLSIKYL 110 L RD + CC HTQ RD R R+ +E ++ R +HKR +KYL Sbjct: 365462 LSRDKNNSCCLHTQRRDESTRDERSTVE----------KLYTMRRKSEHKRNDD*QMKYL 365313 >Cf_Contig998 | | 1 to 108114 Length = 108114 Score = 30.8 bits (68), Expect = 0.42 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 53 RDGCHRCCAHTQDRDAPKRYPRA 75 R G H+ CAH+ R P RYPRA Sbjct: 10974 RAGLHKKCAHSTARAPPCRYPRA 11042 >Cf_Contig1055 | | 1 to 461976 Length = 461976 Score = 29.6 bits (65), Expect = 0.94 Identities = 23/59 (38%), Positives = 26/59 (44%) Frame = +1 Query: 14 PLFALGDLSADECLALGFRKPDLACASCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRY 72 P GD +A LA G L C S R A + RDGC RCC H Q + RY Sbjct: 356086 PRHGSGDAAAG-ALAAGNLPEGLQCDSNRSTTANIIVGCRDGCGRCC-H*QVCRSSSRY 356256 Score = 26.9 bits (58), Expect = 6.1 Identities = 19/46 (41%), Positives = 21/46 (45%) Frame = +3 Query: 27 LALGFRKPDLACASCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRY 72 LA G L C S R A + RDGC RCC H Q + RY Sbjct: 356940 LAAGNLPEGLQCDSNRSNTANIIVGCRDGCGRCC-H*QVCRSSSRY 357074 >Cf_Contig1029 | | 1 to 84437 Length = 84437 Score = 28.9 bits (63), Expect = 1.6 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -2 Query: 25 ECLALGFRKPDLACASCRGLAAFDLDLLRDGCHRCC 60 ECL R P + A R +A D + RDG +RCC Sbjct: 37681 ECLGHALRSPSASTAE-RTCSAGDAGVRRDGGNRCC 37577 >Cf_Contig1070 | | 1 to 336028 Length = 336028 Score = 28.5 bits (62), Expect = 2.1 Identities = 19/53 (35%), Positives = 23/53 (43%) Frame = -3 Query: 52 LRDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKHKRFPK 104 LR HR C HT RDA R P A C C+ Q G + +R P+ Sbjct: 174734 LRRCHHRLCLHTHRRDATIR-PAADTARCGCRAHPEWQWRVGREGDRVRRLPR 174579 Score = 26.9 bits (58), Expect = 6.1 Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Frame = +3 Query: 32 RKPDLACASCRGLAAFDL--DLLRDGC--HRCCAHTQDRDAPKRYPRAVLEVCACKFGHM 87 R P A A CRG D + C HRCC T RDA AVL + GH Sbjct: 271635 RSPPPAAAGCRGAGCDGRGGDAVSARCRQHRCCWCTLRRDAE---AAAVLPGPPARTGHR 271805 Query: 88 PQ 89 Q Sbjct: 271806 QQ 271811 >Cf_Contig1049 | | 1 to 302556 Length = 302556 Score = 28.5 bits (62), Expect = 2.1 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Frame = +1 Query: 52 LRDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEA------FVRGPKHKRF 102 LRDG HR C + R A R R V C+ P++ R +H+R+ Sbjct: 141094 LRDGLHRQCRPKRPRSAAVRLRRVDPRVACCRRRSQPRLAVQRGHLKVARKTRHRRW 141264 >Cf_Contig1048 | | 1 to 336746 Length = 336746 Score = 28.1 bits (61), Expect = 2.7 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +2 Query: 37 ACASCRGLAAFDLDLLRDGCHRCCAHTQD 65 A A+ G D +RDGCHRC A D Sbjct: 188180 AAAAAAGDRLGRQDTVRDGCHRCSASCPD 188266 >Cf_Contig1018 | | 1 to 165852 Length = 165852 Score = 27.7 bits (60), Expect = 3.6 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = -2 Query: 33 KPDLACASCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYPR 74 KP + G AA L H CC H++ R P R R Sbjct: 100328 KPAAGTINAGGTAASSTSLRPSALHSCCRHSRLRPRPCRQSR 100203 >Cf_Contig901 | | 1 to 176845 Length = 176845 Score = 27.7 bits (60), Expect = 3.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 52 LRDGCHRCCAHTQDRDAPKRYP 73 LR+ RCC HT+ R++ R P Sbjct: 93718 LRNSRSRCCVHTETRESDARLP 93783 Score = 27.7 bits (60), Expect = 3.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 52 LRDGCHRCCAHTQDRDAPKRYP 73 LR+ RCC HT+ R++ R P Sbjct: 94897 LRNSRSRCCVHTETRESDARLP 94962 >Cf_Contig821 | | 1 to 27018 Length = 27018 Score = 27.7 bits (60), Expect = 3.6 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 Query: 52 LRDGCHRCCAHTQDRDAPKRYP 73 LR+ RCC HT+ R++ R P Sbjct: 239 LRNSRSRCCVHTETRESDARLP 174 >Cf_Contig784 | | 1 to 103312 Length = 103312 Score = 27.7 bits (60), Expect = 3.6 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 Query: 86 HMPQIEAFVRGPKHKRFPKLSIKYLRGADPII 117 H P + RGP H+ + IK L+GAD +I Sbjct: 26133 HPPPPHSTCRGPFHRLWRTPQIKVLQGADQVI 26038 >Cf_Contig587 | | 1 to 17190 Length = 17190 Score = 27.7 bits (60), Expect = 3.6 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = +2 Query: 58 RCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKHK-RFPKLSIKYL 110 RCCA R P A+ C + GH P A P H R+P L ++ L Sbjct: 5477 RCCAGETVR------PHAIATGCRGRRGHHPPSAAASAAPSHLCRYPLLGVQLL 5620 >Cf_Contig333 | | 1 to 29241 Length = 29241 Score = 27.7 bits (60), Expect = 3.6 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Frame = +2 Query: 36 LACASCRGLAAFDL------DLLR------DGCHRCCAHTQDRDAPKRYPRAVLEVCACK 83 L + G + FDL DL R G HR + P P+ + +V C+ Sbjct: 22274 LTAKNAMGTSMFDLTKGTFLDLPRVQHLHHGGLHRTAVLLRRPQGPHGGPQRLSQVSLCE 22453 Query: 84 FGHMPQIEAFVRGPKH-KRFPKLSIKYLRG 112 H+P + A P H +R P + L G Sbjct: 22454 VRHLPLLLAGAAHPGHLRRRPAADLLLLEG 22543 >Cf_Contig1053 | | 1 to 375645 Length = 375645 Score = 27.3 bits (59), Expect = 4.7 Identities = 13/42 (30%), Positives = 14/42 (33%) Frame = -3 Query: 32 RKPDLACASCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYP 73 R+P CRG C CCA D P R P Sbjct: 327082 RRPACERRPCRGSWCLSTSPALSSCGGCCARAADSRTPTRLP 326957 >Cf_Contig1039 | | 1 to 222123 Length = 222123 Score = 27.3 bits (59), Expect = 4.7 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +1 Query: 42 RGLAAFDLDLLRDGCHRCCAHTQDRDAPKR 71 RGL D +LLR CC + RD P R Sbjct: 140344 RGLTGAD-ELLRSPLRHCCRSARQRDGPSR 140430 >Cf_Contig1038 | | 1 to 213895 Length = 213895 Score = 27.3 bits (59), Expect = 4.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +2 Query: 16 FALGDLSADECLALGFRKPDLACASCRG 43 F+ +EC+ FR+P CA+C G Sbjct: 121490 FSTSQRRIEECMIWRFRRPSGCCANCTG 121573 >Cf_Contig1005 | | 1 to 178835 Length = 178835 Score = 27.3 bits (59), Expect = 4.7 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = -2 Query: 50 DLLRDGCHRCCAHTQDRDAPKRY-PRAVLEVCAC 82 D LR+ C Q+R K PRAVL VCAC Sbjct: 40153 DGLREESRMCNCQMQERKRDKMCTPRAVLCVCAC 40052 >Cf_Contig984 | | 1 to 150484 Length = 150484 Score = 27.3 bits (59), Expect = 4.7 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -2 Query: 58 RCC-----AHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKHKRFPKLSIKYLRG 112 RCC Q R++P+R PRA+L V A + + P+ FP +S++ + Sbjct: 24840 RCCDTPMSPRRQPRNSPQRLPRALLPVTATQ----------QQPPRRVVFPSVSVEQVER 24691 Query: 113 A 113 A Sbjct: 24690 A 24688 >Cf_Contig1064 | | 1 to 131218 Length = 131218 Score = 26.9 bits (58), Expect = 6.1 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%) Frame = -2 Query: 56 CHRCCAHTQDR-DAPKRYP 73 CHRCC H + R +AP R P Sbjct: 54000 CHRCCHHPRPR*NAPTRGP 53944 >Cf_Contig1054 | | 1 to 431369 Length = 431369 Score = 26.9 bits (58), Expect = 6.1 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = -1 Query: 57 HRCCAHTQDRDAPKRYPRAVLEVCACKFGHMP 88 H CC DR +P RYP C C+ P Sbjct: 28820 HCCCYCC*DRRSPTRYPTPPGSPCRCRCSCAP 28725 >Cf_Contig1041 | | 1 to 166514 Length = 166514 Score = 26.9 bits (58), Expect = 6.1 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -1 Query: 54 DGCHRCCAHTQDRDAPKRYPRAVLEVCAC 82 DGC RC +H+ R R R CAC Sbjct: 110744 DGCLRCASHSWKRQWRTR*ARTCAGRCAC 110658 >Cf_Contig1040 | | 1 to 176268 Length = 176268 Score = 26.9 bits (58), Expect = 6.1 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 16/48 (33%) Frame = +1 Query: 52 LRDGC-----HRCCAHTQDR-----------DAPKRYPRAVLEVCACK 83 +R GC HRC HT+ R A ++ PR +L +C C+ Sbjct: 172078 VRRGCTRAATHRCATHTRQRIATGEDRRGIGCATRKRPRLLLIICNCR 172221 >Cf_Contig983 | | 1 to 191195 Length = 191195 Score = 26.9 bits (58), Expect = 6.1 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = +3 Query: 26 CLALGFRKPDLA-CASCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYPRAVLEVCACK 83 CL G R L R ++F L + +DG CC HT AVLE C+ + Sbjct: 151800 CLCYGIRAIFLLRLLIARRCSSFFLCIYKDGASWCCIHT-----------AVLETCSSR 151943 >Cf_Contig1071 | | 1 to 673414 Length = 673414 Score = 26.6 bits (57), Expect = 8.0 Identities = 15/46 (32%), Positives = 18/46 (39%) Frame = +3 Query: 53 RDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPK 98 R C R R AP+R PR+ C C P A GP+ Sbjct: 389370 RRRCQRQRGSRPTRSAPRRPPRSSPRCCGCPPASRPPPTAA*SGPR 389507 >Cf_Contig1052 | | 1 to 356154 Length = 356154 Score = 26.6 bits (57), Expect = 8.0 Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 12/105 (11%) Frame = -2 Query: 20 DLSADECLALGFRKPDLACASCRGLAAFDLDLLRDGCHR------------CCAHTQDRD 67 D A A G ++ LA A R AA L CHR CC+H + Sbjct: 304862 DCDAARAHATGLQR--LAAAPERAWAAATL------CHRCCHTGNQQCWRFCCSHHRHSS 304707 Query: 68 APKRYPRAVLEVCACKFGHMPQIEAFVRGPKHKRFPKLSIKYLRG 112 +R A L AC G + ++ A H P+L+ + LRG Sbjct: 304706 ECRRSGLAQLRWLACS-GQLERLAA-AAADGHDARPRLAARLLRG 304578 >Cf_Contig1022 | | 1 to 227790 Length = 227790 Score = 26.6 bits (57), Expect = 8.0 Identities = 10/33 (30%), Positives = 14/33 (42%) Frame = -1 Query: 57 HRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQ 89 H CC + + AP +P+ C C PQ Sbjct: 49137 HPCCRYLRW*KAPPPHPQTARHPCCCSCSQSPQ 49039 >Cf_Contig989 | | 1 to 189394 Length = 189394 Score = 26.6 bits (57), Expect = 8.0 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = -2 Query: 57 HRCCAHTQDRDAPKRYPRAVLEVCACKFGH-MPQIEAFV--RGPKHK 100 HRCC Q R AP+R R C GH P + A V P+H+ Sbjct: 73740 HRCCCCPQPRVAPRRRQR-------CDEGHRSPAMSASVPLPSPQHR 73621 >Cf_Contig865 | | 1 to 83857 Length = 83857 Score = 26.6 bits (57), Expect = 8.0 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +2 Query: 56 CHRCCAHTQDRDAPK 70 C RCC+H RDA + Sbjct: 76616 CRRCCSHVMQRDAAR 76660 >Cf_Contig860 | | 1 to 127378 Length = 127378 Score = 26.6 bits (57), Expect = 8.0 Identities = 11/27 (40%), Positives = 12/27 (44%) Frame = -3 Query: 56 CHRCCAHTQDRDAPKRYPRAVLEVCAC 82 C RC A TQ R P + CAC Sbjct: 81938 CQRCVAGTQRRTIPPHTVTRAIVTCAC 81858 >Cf_Contig838 | | 1 to 82578 Length = 82578 Score = 26.6 bits (57), Expect = 8.0 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 2 AAYYLYLQLLIAPLFALGDLSADECLALGFRKPDLACASCRGLAAFDLDLL 52 +++YL L +L+ PLF+ A L LG R+ C + F L L+ Sbjct: 81367 SSHYLDLSVLVFPLFSCSARGA--ALQLGVRQIPFPRVQCNAVLCFSLLLI 81513 >Cf_Contig819 | | 1 to 113412 Length = 113412 Score = 26.6 bits (57), Expect = 8.0 Identities = 13/35 (37%), Positives = 15/35 (42%) Frame = -3 Query: 40 SCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYPR 74 SCRG + C RCC HT A + PR Sbjct: 54607 SCRGNGMW--------CDRCCVHTPSSPAARATPR 54527 >Cf_Contig334 | | 1 to 14647 Length = 14647 Score = 26.6 bits (57), Expect = 8.0 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -1 Query: 52 LRDGCHRCCAHTQDR 66 +R G HRCCAH + R Sbjct: 10759 VRSGGHRCCAHARKR 10715 Database: C.fasciculata/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 37,048,325 Number of sequences in database: 1089 Lambda K H 0.327 0.143 0.454 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,527,514 Number of Sequences: 1089 Number of extensions: 235177 Number of successful extensions: 2166 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 291 Number of HSP's successfully gapped in prelim test: 106 Number of HSP's that attempted gapping in prelim test: 1321 Number of HSP's gapped (non-prelim): 1462 length of query: 150 length of database: 12,349,441 effective HSP length: 92 effective length of query: 58 effective length of database: 12,249,253 effective search space: 710456674 effective search space used: 710456674 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 56 (26.2 bits)