TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|241685802|ref|XP_002412809.1| salivary selenoprotein precursor, putative [Ixodes scapularis] (150 letters) Database: A.laibachii_Nc14/genome.fa 3816 sequences; 32,740,139 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|325192485|emb|FR824474.1| Albugo laibachii Nc14, genomic cont... 31 0.37 gi|325181596|emb|FR824063.1| Albugo laibachii Nc14, genomic cont... 30 0.63 gi|325189417|emb|FR824258.1| Albugo laibachii Nc14, genomic cont... 28 1.8 gi|325179460|emb|FR824046.1| Albugo laibachii Nc14, genomic cont... 28 2.4 gi|325190975|emb|FR824344.1| Albugo laibachii Nc14, genomic cont... 28 3.1 gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic cont... 27 5.3 gi|325187338|emb|FR824182.1| Albugo laibachii Nc14, genomic cont... 27 5.3 gi|325187966|emb|FR824202.1| Albugo laibachii Nc14, genomic cont... 27 5.3 gi|325188466|emb|FR824221.1| Albugo laibachii Nc14, genomic cont... 27 5.3 gi|325184219|emb|FR824100.1| Albugo laibachii Nc14, genomic cont... 27 7.0 >gi|325192485|emb|FR824474.1| Albugo laibachii Nc14, genomic contig CONTIG_431_NC14_v4_18283_238 Length = 18283 Score = 30.8 bits (68), Expect = 0.37 Identities = 22/73 (30%), Positives = 32/73 (43%) Frame = -1 Query: 59 CCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKHKRFPKLSIKYLRGADPIIK 118 CCA T R + RYP L C+ H Q+ A+ R KR + + R A + + Sbjct: 18208 CCATTASRKSFSRYP--CLSSITCRCNHRMQVGAYHRRNDRKRLHVIDLPIRRVAVILTR 18035 Query: 119 LMDDRGEVQEELS 131 + VQ+ LS Sbjct: 18034 SLYLFDMVQKPLS 17996 >gi|325181596|emb|FR824063.1| Albugo laibachii Nc14, genomic contig CONTIG_18_NC14_v4_198151_220 Length = 198151 Score = 30.0 bits (66), Expect = 0.63 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = -3 Query: 67 DAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKHKRFPKLSIKYLRGADPIIKLMDDRGEV 126 D P YP + ++ AC FG QIEA V + K + + RGA PI ++ + Sbjct: 28241 DLPATYPTSNNQLSACIFGLWDQIEAKVL--RFKEMAY*TN*HSRGAQPIGDIITRAKSI 28068 Query: 127 QEELSIK 133 Q SI+ Sbjct: 28067 QSSPSIE 28047 >gi|325189417|emb|FR824258.1| Albugo laibachii Nc14, genomic contig CONTIG_213_NC14_v4_44640_228 Length = 44640 Score = 28.5 bits (62), Expect = 1.8 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +3 Query: 53 RDGCHRCCAHTQDRDAPKRYPRAVLEVC 80 R GCH C A + R+P V+ +C Sbjct: 40530 RPGCHLCAARLSKQQPCARFPHLVMSLC 40613 >gi|325179460|emb|FR824046.1| Albugo laibachii Nc14, genomic contig CONTIG_1_NC14_v4_580768_240 Length = 580768 Score = 28.1 bits (61), Expect = 2.4 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 14/44 (31%) Frame = -1 Query: 47 FDLDLLRDGCHRCCAHT--------------QDRDAPKRYPRAV 76 FDL++LRD C HT D+D PKRY V Sbjct: 550456 FDLEILRDAEAYCSIHTLKHESENPWLNTTVSDKDTPKRYSAKV 550325 >gi|325190975|emb|FR824344.1| Albugo laibachii Nc14, genomic contig CONTIG_299_NC14_v4_31534_143 Length = 31534 Score = 27.7 bits (60), Expect = 3.1 Identities = 8/28 (28%), Positives = 16/28 (57%) Frame = -3 Query: 53 RDGCHRCCAHTQDRDAPKRYPRAVLEVC 80 R GCH C + + + + R+P ++ +C Sbjct: 30209 RRGCHLCASRSSKQQSRARFPHLLMSLC 30126 >gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic contig CONTIG_3_NC14_v4_366484_228 Length = 366484 Score = 26.9 bits (58), Expect = 5.3 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -1 Query: 32 RKPDLACASCRGLAAFDLDLLRDGCHR 58 R+P C+S GL F+L + GC+R Sbjct: 289147 RRPIARCSSMLGLIYFELSVRSTGCYR 289067 >gi|325187338|emb|FR824182.1| Albugo laibachii Nc14, genomic contig CONTIG_137_NC14_v4_67539_389 Length = 67539 Score = 26.9 bits (58), Expect = 5.3 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +1 Query: 84 FGHMPQIEAFVRGPKHKRFPKLSIKYLRG 112 +G +P+ AF+R H + +LSIKYLRG Sbjct: 65881 YGCIPK*NAFLRVQPHAK--ELSIKYLRG 65961 >gi|325187966|emb|FR824202.1| Albugo laibachii Nc14, genomic contig CONTIG_157_NC14_v4_58374_239 Length = 58374 Score = 26.9 bits (58), Expect = 5.3 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 62 HTQDRDAPKRYPRAVLEVCACKFGHMPQIEAFVRGPKH 99 H+ R+ P +Y A L KFG P++E + P+H Sbjct: 51016 HSSSRNNPPKY--AQLCCSYSKFGSQPEVELPLHAPRH 51123 >gi|325188466|emb|FR824221.1| Albugo laibachii Nc14, genomic contig CONTIG_176_NC14_v4_54735_248 Length = 54735 Score = 26.9 bits (58), Expect = 5.3 Identities = 20/70 (28%), Positives = 28/70 (40%) Frame = +1 Query: 32 RKPDLACASCRGLAAFDLDLLRDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQIE 91 RK D+ R +FD + CH AP +YP VC C F + +I Sbjct: 9346 RKGDVLIEIVRSKYSFDEK*M---CHLIQRFVVRFHAP*KYPGHGYGVCECCFDDLVRIG 9516 Query: 92 AFVRGPKHKR 101 + P H+R Sbjct: 9517 RRLNKPTHRR 9546 >gi|325184219|emb|FR824100.1| Albugo laibachii Nc14, genomic contig CONTIG_55_NC14_v4_109355_213 Length = 109355 Score = 26.6 bits (57), Expect = 7.0 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +3 Query: 44 LAAFDLDLLRDGCHRCCAHTQDRDAPKRYPRAVLEVCACKFGHMPQ 89 +AA + L+R C + K+Y +++ AC F H PQ Sbjct: 37491 IAAIEWQLIRHNCIAISHFSIQSAYEKQYQQSIDRFLACIFDHYPQ 37628 Database: A.laibachii_Nc14/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,740,139 Number of sequences in database: 3816 Lambda K H 0.327 0.143 0.454 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,595,631 Number of Sequences: 3816 Number of extensions: 114299 Number of successful extensions: 664 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 322 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 259 Number of HSP's gapped (non-prelim): 499 length of query: 150 length of database: 10,913,379 effective HSP length: 91 effective length of query: 59 effective length of database: 10,566,123 effective search space: 623401257 effective search space used: 623401257 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 56 (26.2 bits)