TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|74803015|sp|Q7Q7W5|Q7Q7W5_ANOGA ENSANGP00000011457
         (163 letters)

Database: P.polycephalum/genome.fa 
           297,657 sequences; 319,018,052 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig3437  9950 11750                                                 31   2.0  
Contig3515  9773 10098                                                 30   5.8  
Contig10078  3365 5761                                                 29   7.5  

>Contig3437  9950 11750
          Length = 11750

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +1

Query: 41   CSSLSDYGLIELKEHCLECCQKDTEADSKLKVYPAAVLEVCTCKFGAYPQIQAFI 95
            C  LSD+G+I  ++  L   Q++ +A        A +L + +CK G  P+ Q  I
Sbjct: 8092 CLHLSDHGVIC*QQ*ILSALQENRQAQESRLQNAAKLLVIISCKIGYVPKFQWLI 8256


>Contig3515  9773 10098
          Length = 10098

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
 Frame = +1

Query: 8    CLLFSIVTVIGAEFSAEDCRELGLIK--------SQLFCSSCSSLSDYGLIELKEHCLEC 59
            CL +S++T I       DC+++  +          +L+C  CS+L       L  HC+ C
Sbjct: 7630 CLFYSLMTCIVMRCHIRDCKKILRLNMDIFECTYEKLYCEECSAL-------LFGHCIYC 7788

Query: 60   CQK 62
             Q+
Sbjct: 7789 GQE 7797


>Contig10078  3365 5761
          Length = 5761

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = +3

Query: 14   VTVIGAEFSAEDCRELGLIKSQLFCSSCSSLSDYGLIELKEHCLECC-QKDTEADSKLKV 72
            VTV+  E    DC  +GL  +  F   C+  +D G       C  CC  K        KV
Sbjct: 2337 VTVVMRERHLRDCERVGLDDACAFPGRCAPKTDCG-------CFRCCAYKKNFKMISAKV 2495

Query: 73   YP 74
            YP
Sbjct: 2496 YP 2501


  Database: P.polycephalum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 319,018,052
  Number of sequences in database:  297,657
  
Lambda     K      H
   0.322    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,106,470
Number of Sequences: 297657
Number of extensions: 891794
Number of successful extensions: 3173
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3068
length of query: 163
length of database: 106,339,350
effective HSP length: 105
effective length of query: 58
effective length of database: 75,085,365
effective search space: 4354951170
effective search space used: 4354951170
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)